RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 FBXO46Q6PJ61 603 aaPredicted RBP7□□□□□ -1.29
CAPN3-210ENST00000561817 ALKAL1Q6UXT8 129 aa7□□□□□ -1.29
CAPN3-210ENST00000561817 ZNF572Q7Z3I7 529 aaPredicted RBP7□□□□□ -1.29
CAPN3-210ENST00000561817 VPS36Q86VN1 386 aa7□□□□□ -1.29
CAPN3-210ENST00000561817 SESTD1Q86VW0 696 aa7□□□□□ -1.29
CAPN3-210ENST00000561817 THNSL1Q8IYQ7 743 aa7□□□□□ -1.29
CAPN3-210ENST00000561817 RPUSD2Q8IZ73 545 aaKnown RBP7□□□□□ -1.29
CAPN3-210ENST00000561817 TXLNBQ8N3L3 684 aa7□□□□□ -1.29
CAPN3-210ENST00000561817 C1orf127Q8N9H9 656 aa7□□□□□ -1.29
CAPN3-210ENST00000561817 TPCN2Q8NHX9 752 aa7□□□□□ -1.29
CAPN3-210ENST00000561817 DNAJB3Q8WWF6 145 aa7□□□□□ -1.29
CAPN3-210ENST00000561817 PIK3R5Q8WYR1 880 aa7□□□□□ -1.29
CAPN3-210ENST00000561817 WNT8BQ93098 351 aa7□□□□□ -1.29
CAPN3-210ENST00000561817 ARHGEF26Q96DR7 871 aa7□□□□□ -1.29
CAPN3-210ENST00000561817 NOX5Q96PH1 765 aa7□□□□□ -1.29
CAPN3-210ENST00000561817 MTG1Q9BT17 334 aaPredicted RBP7□□□□□ -1.29
CAPN3-210ENST00000561817 TCHPQ9BT92 498 aa7□□□□□ -1.29
CAPN3-210ENST00000561817 KATNAL1Q9BW62 490 aa7□□□□□ -1.29
CAPN3-210ENST00000561817 FAM49AQ9H0Q0 323 aaPredicted RBP7□□□□□ -1.29
CAPN3-210ENST00000561817 CXCL16Q9H2A7 254 aa7□□□□□ -1.29
CAPN3-210ENST00000561817 ASB7Q9H672 318 aa7□□□□□ -1.29
CAPN3-210ENST00000561817 ABCB6Q9NP58 842 aa7□□□□□ -1.29
CAPN3-210ENST00000561817 LUC7LQ9NQ29 371 aaKnown RBP7□□□□□ -1.29
CAPN3-210ENST00000561817 C1orf112Q9NSG2 853 aa7□□□□□ -1.29
CAPN3-210ENST00000561817 SNX12Q9UMY4 172 aa7□□□□□ -1.29
CAPN3-210ENST00000561817 PTPN22Q9Y2R2 807 aa7□□□□□ -1.29
CAPN3-210ENST00000561817 JRKLQ9Y4A0 524 aa7□□□□□ -1.29
CAPN3-210ENST00000561817 MROH7Q68CQ1 1323 aa7□□□□□ -1.29
CAPN3-210ENST00000561817 TRIP11Q15643 1979 aa6.99□□□□□ -1.29
CAPN3-210ENST00000561817 PDCD11Q14690 1871 aaKnown RBP6.99□□□□□ -1.29
CAPN3-210ENST00000561817 C17orf102A2RUQ5 167 aa6.99□□□□□ -1.29
CAPN3-210ENST00000561817 EFCAB8A8MWE9 144 aa6.99□□□□□ -1.29
CAPN3-210ENST00000561817 H3BM21 787 aa6.99□□□□□ -1.29
CAPN3-210ENST00000561817 NCK2O43639 380 aa6.99□□□□□ -1.29
CAPN3-210ENST00000561817 BUB1O43683 1085 aa6.99□□□□□ -1.29
CAPN3-210ENST00000561817 LILRB3O75022 631 aa6.99□□□□□ -1.29
CAPN3-210ENST00000561817 SRGAP2O75044 1071 aa6.99□□□□□ -1.29
CAPN3-210ENST00000561817 RTN2O75298 545 aa6.99□□□□□ -1.29
CAPN3-210ENST00000561817 PALMO75781 387 aa6.99□□□□□ -1.29
CAPN3-210ENST00000561817 MTA2O94776 668 aa6.99□□□□□ -1.29
CAPN3-210ENST00000561817 STAU1O95793 577 aaKnown RBP6.99□□□□□ -1.29
CAPN3-210ENST00000561817 PGK1P00558 417 aa6.99□□□□□ -1.29
CAPN3-210ENST00000561817 CYP1A1P04798 512 aaPredicted RBP6.99□□□□□ -1.29
CAPN3-210ENST00000561817 INHAP05111 366 aa6.99□□□□□ -1.29
CAPN3-210ENST00000561817 MMEP08473 750 aa6.99□□□□□ -1.29
CAPN3-210ENST00000561817 UNGP13051 313 aaPredicted RBP6.99□□□□□ -1.29
CAPN3-210ENST00000561817 IBSPP21815 317 aaPredicted RBP6.99□□□□□ -1.29
CAPN3-210ENST00000561817 EIF4BP23588 611 aaKnown RBP6.99□□□□□ -1.29
CAPN3-210ENST00000561817 GRK4P32298 578 aa6.99□□□□□ -1.29
CAPN3-210ENST00000561817 ASPAP45381 313 aa6.99□□□□□ -1.29
CAPN3-210ENST00000561817 CRYBB1P53674 252 aaPredicted RBP6.99□□□□□ -1.29
CAPN3-210ENST00000561817 OSTNP61366 133 aa6.99□□□□□ -1.29
CAPN3-210ENST00000561817 MGAT3Q09327 533 aa6.99□□□□□ -1.29
CAPN3-210ENST00000561817 TMEM62Q0P6H9 643 aa6.99□□□□□ -1.29
CAPN3-210ENST00000561817 BIRC3Q13489 604 aa6.99□□□□□ -1.29
CAPN3-210ENST00000561817 SNX17Q15036 470 aa6.99□□□□□ -1.29
CAPN3-210ENST00000561817 ZBTB6Q15916 424 aa6.99□□□□□ -1.29
CAPN3-210ENST00000561817 QPCTQ16769 361 aa6.99□□□□□ -1.29
CAPN3-210ENST00000561817 CLEC16AQ2KHT3 1053 aa6.99□□□□□ -1.29
CAPN3-210ENST00000561817 NBPF20Q3BBV1 942 aa6.99□□□□□ -1.29
CAPN3-210ENST00000561817 DCAF4L1Q3SXM0 396 aa6.99□□□□□ -1.29
CAPN3-210ENST00000561817 XKR4Q5GH76 650 aa6.99□□□□□ -1.29
CAPN3-210ENST00000561817 WDR44Q5JSH3 913 aa6.99□□□□□ -1.29
CAPN3-210ENST00000561817 MEI1Q5TIA1 1274 aa6.99□□□□□ -1.29
CAPN3-210ENST00000561817 JADE1Q6IE81 842 aa6.99□□□□□ -1.29
CAPN3-210ENST00000561817 GDF6Q6KF10 455 aaPredicted RBP6.99□□□□□ -1.29
CAPN3-210ENST00000561817 RPAINQ86UA6 219 aa6.99□□□□□ -1.29
CAPN3-210ENST00000561817 ZNF677Q86XU0 584 aa6.99□□□□□ -1.29
CAPN3-210ENST00000561817 CREG2Q8IUH2 290 aa6.99□□□□□ -1.29
CAPN3-210ENST00000561817 COG1Q8WTW3 980 aa6.99□□□□□ -1.29
CAPN3-210ENST00000561817 FAXDC2Q96IV6 333 aa6.99□□□□□ -1.29
CAPN3-210ENST00000561817 OSMRQ99650 979 aa6.99□□□□□ -1.29
CAPN3-210ENST00000561817 ZSWIM1Q9BR11 485 aa6.99□□□□□ -1.29
CAPN3-210ENST00000561817 KLF16Q9BXK1 252 aaPredicted RBP6.99□□□□□ -1.29
CAPN3-210ENST00000561817 EIF2AQ9BY44 585 aaKnown RBP6.99□□□□□ -1.29
CAPN3-210ENST00000561817 BCO2Q9BYV7 579 aa6.99□□□□□ -1.29
CAPN3-210ENST00000561817 GCOM2Q9BZD3 368 aaPredicted RBP6.99□□□□□ -1.29
CAPN3-210ENST00000561817 RPF1Q9H9Y2 349 aaKnown RBP6.99□□□□□ -1.29
CAPN3-210ENST00000561817 GTF2IRD1Q9UHL9 959 aa6.99□□□□□ -1.29
CAPN3-210ENST00000561817 COG5Q9UP83 839 aa6.99□□□□□ -1.29
CAPN3-210ENST00000561817 SAR1BQ9Y6B6 198 aa6.99□□□□□ -1.29
CAPN3-210ENST00000561817 CITO14578 2027 aa6.99□□□□□ -1.29
CAPN3-210ENST00000561817 FAM181BA6NEQ2 426 aa6.98□□□□□ -1.29
CAPN3-210ENST00000561817 ZNF185O15231 689 aa6.98□□□□□ -1.29
CAPN3-210ENST00000561817 ZIC2O95409 532 aaPredicted RBP6.98□□□□□ -1.29
CAPN3-210ENST00000561817 NPTXRO95502 500 aa6.98□□□□□ -1.29
CAPN3-210ENST00000561817 GNRH1P01148 92 aa6.98□□□□□ -1.29
CAPN3-210ENST00000561817 FTLP02792 175 aaPredicted RBP6.98□□□□□ -1.29
CAPN3-210ENST00000561817 CYP1A2P05177 515 aa6.98□□□□□ -1.29
CAPN3-210ENST00000561817 C6orf222P0C671 652 aaPredicted RBP6.98□□□□□ -1.29
CAPN3-210ENST00000561817 H2AFXP16104 143 aaPredicted RBP6.98□□□□□ -1.29
CAPN3-210ENST00000561817 ZSCAN20P17040 1043 aaPredicted RBP6.98□□□□□ -1.29
CAPN3-210ENST00000561817 TBXAS1P24557 533 aaPredicted RBP6.98□□□□□ -1.29
CAPN3-210ENST00000561817 AXLP30530 894 aa6.98□□□□□ -1.29
CAPN3-210ENST00000561817 PRMT2P55345 433 aa6.98□□□□□ -1.29
CAPN3-210ENST00000561817 TFAMQ00059 246 aaKnown RBP6.98□□□□□ -1.29
CAPN3-210ENST00000561817 PTP4A2Q12974 167 aa6.98□□□□□ -1.29
CAPN3-210ENST00000561817 ELF2Q15723 593 aa6.98□□□□□ -1.29
CAPN3-210ENST00000561817 SGSM1Q2NKQ1 1148 aa6.98□□□□□ -1.29
CAPN3-210ENST00000561817 ERCC6LQ2NKX8 1250 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms