RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 LPIN3Q9BQK8 851 aa14.95□□□□□ -0.02
TPM1-230ENST00000561266 ZCWPW1Q9H0M4 648 aa14.95□□□□□ -0.02
TPM1-230ENST00000561266 ZDHHC7Q9NXF8 308 aa14.95□□□□□ -0.02
TPM1-230ENST00000561266 PRKAG3Q9UGI9 489 aa14.95□□□□□ -0.02
TPM1-230ENST00000561266 OR6C75A6NL08 312 aa14.94□□□□□ -0.02
TPM1-230ENST00000561266 MAPK13O15264 365 aa14.94□□□□□ -0.02
TPM1-230ENST00000561266 SOAT2O75908 522 aa14.94□□□□□ -0.02
TPM1-230ENST00000561266 CPB1P15086 417 aa14.94□□□□□ -0.02
TPM1-230ENST00000561266 LMO2P25791 158 aa14.94□□□□□ -0.02
TPM1-230ENST00000561266 PNPLA4P41247 253 aa14.94□□□□□ -0.02
TPM1-230ENST00000561266 MTHFRP42898 656 aa14.94□□□□□ -0.02
TPM1-230ENST00000561266 STX17P56962 302 aa14.94□□□□□ -0.02
TPM1-230ENST00000561266 ZACNQ401N2 412 aa14.94□□□□□ -0.02
TPM1-230ENST00000561266 PPM1LQ5SGD2 360 aa14.94□□□□□ -0.02
TPM1-230ENST00000561266 TTI2Q6NXR4 508 aa14.94□□□□□ -0.02
TPM1-230ENST00000561266 SV2AQ7L0J3 742 aa14.94□□□□□ -0.02
TPM1-230ENST00000561266 GRASPQ7Z6J2 395 aaPredicted RBP14.94□□□□□ -0.02
TPM1-230ENST00000561266 TCEAL8Q8IYN2 117 aa14.94□□□□□ -0.02
TPM1-230ENST00000561266 RIPOR3Q96MK2 946 aa14.94□□□□□ -0.02
TPM1-230ENST00000561266 PKMYT1Q99640 499 aa14.94□□□□□ -0.02
TPM1-230ENST00000561266 MRPL45Q9BRJ2 306 aaKnown RBP14.94□□□□□ -0.02
TPM1-230ENST00000561266 CYP4F11Q9HBI6 524 aa14.94□□□□□ -0.02
TPM1-230ENST00000561266 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.94□□□□□ -0.02
TPM1-230ENST00000561266 DNMT3BQ9UBC3 853 aaKnown RBP14.94□□□□□ -0.02
TPM1-230ENST00000561266 AFF4Q9UHB7 1163 aaKnown RBP14.94□□□□□ -0.02
TPM1-230ENST00000561266 FAM50BQ9Y247 325 aa14.94□□□□□ -0.02
TPM1-230ENST00000561266 FRMD4BQ9Y2L6 1034 aa14.94□□□□□ -0.02
TPM1-230ENST00000561266 SLC27A5Q9Y2P5 690 aa14.94□□□□□ -0.02
TPM1-230ENST00000561266 PTPRDP23468 1912 aa14.94□□□□□ -0.02
TPM1-230ENST00000561266 TRIOO75962 3097 aa14.93□□□□□ -0.02
TPM1-230ENST00000561266 ARHGEF37A1IGU5 675 aa14.93□□□□□ -0.02
TPM1-230ENST00000561266 MTMR11A4FU01 709 aa14.93□□□□□ -0.02
TPM1-230ENST00000561266 TNFRSF10AO00220 468 aa14.93□□□□□ -0.02
TPM1-230ENST00000561266 GABRDO14764 452 aa14.93□□□□□ -0.02
TPM1-230ENST00000561266 ATP2C2O75185 946 aa14.93□□□□□ -0.02
TPM1-230ENST00000561266 PAX3P23760 479 aa14.93□□□□□ -0.02
TPM1-230ENST00000561266 PSMC2P35998 433 aaKnown RBP14.93□□□□□ -0.02
TPM1-230ENST00000561266 GCLMP48507 274 aa14.93□□□□□ -0.02
TPM1-230ENST00000561266 DUSP4Q13115 394 aa14.93□□□□□ -0.02
TPM1-230ENST00000561266 GPR17Q13304 367 aa14.93□□□□□ -0.02
TPM1-230ENST00000561266 SLC39A12Q504Y0 691 aa14.93□□□□□ -0.02
TPM1-230ENST00000561266 TPGS2Q68CL5 300 aa14.93□□□□□ -0.02
TPM1-230ENST00000561266 SPOPLQ6IQ16 392 aa14.93□□□□□ -0.02
TPM1-230ENST00000561266 ST13P5Q8NFI4 369 aaPredicted RBP14.93□□□□□ -0.02
TPM1-230ENST00000561266 NELFBQ8WX92 580 aa14.93□□□□□ -0.02
TPM1-230ENST00000561266 DHTKD1Q96HY7 919 aaPredicted RBP14.93□□□□□ -0.02
TPM1-230ENST00000561266 MYADMQ96S97 322 aa14.93□□□□□ -0.02
TPM1-230ENST00000561266 PI4K2AQ9BTU6 479 aa14.93□□□□□ -0.02
TPM1-230ENST00000561266 RHOBTB2Q9BYZ6 727 aa14.93□□□□□ -0.02
TPM1-230ENST00000561266 SDCBP2Q9H190 292 aa14.93□□□□□ -0.02
TPM1-230ENST00000561266 WDR6Q9NNW5 1121 aaKnown RBP14.93□□□□□ -0.02
TPM1-230ENST00000561266 CEP72Q9P209 647 aa14.93□□□□□ -0.02
TPM1-230ENST00000561266 CTNND2Q9UQB3 1225 aa14.93□□□□□ -0.02
TPM1-230ENST00000561266 INSL5Q9Y5Q6 135 aa14.93□□□□□ -0.02
TPM1-230ENST00000561266 HUS1O60921 280 aa14.92□□□□□ -0.02
TPM1-230ENST00000561266 HLA-DRAP01903 254 aa14.92□□□□□ -0.02
TPM1-230ENST00000561266 RPL13P26373 211 aaKnown RBP14.92□□□□□ -0.02
TPM1-230ENST00000561266 HOXA9P31269 272 aa14.92□□□□□ -0.02
TPM1-230ENST00000561266 SSTR3P32745 418 aaPredicted RBP14.92□□□□□ -0.02
TPM1-230ENST00000561266 CDH8P55286 799 aa14.92□□□□□ -0.02
TPM1-230ENST00000561266 BIRC3Q13489 604 aa14.92□□□□□ -0.02
TPM1-230ENST00000561266 SLC5A9Q2M3M2 681 aa14.92□□□□□ -0.02
TPM1-230ENST00000561266 UVSSAQ2YD98 709 aa14.92□□□□□ -0.02
TPM1-230ENST00000561266 LIN9Q5TKA1 542 aa14.92□□□□□ -0.02
TPM1-230ENST00000561266 METTL23Q86XA0 190 aa14.92□□□□□ -0.02
TPM1-230ENST00000561266 RNF135Q8IUD6 432 aa14.92□□□□□ -0.02
TPM1-230ENST00000561266 ADGRF2Q8IZF7 708 aa14.92□□□□□ -0.02
TPM1-230ENST00000561266 HS6ST3Q8IZP7 471 aa14.92□□□□□ -0.02
TPM1-230ENST00000561266 TOP6BLQ8N6T0 577 aa14.92□□□□□ -0.02
TPM1-230ENST00000561266 ITFG1Q8TB96 612 aa14.92□□□□□ -0.02
TPM1-230ENST00000561266 SEMA4DQ92854 862 aa14.92□□□□□ -0.02
TPM1-230ENST00000561266 NECTIN4Q96NY8 510 aa14.92□□□□□ -0.02
TPM1-230ENST00000561266 DNAJC25Q9H1X3 360 aa14.92□□□□□ -0.02
TPM1-230ENST00000561266 EPHX3Q9H6B9 360 aa14.92□□□□□ -0.02
TPM1-230ENST00000561266 SMYD3Q9H7B4 428 aa14.92□□□□□ -0.02
TPM1-230ENST00000561266 MMRN2Q9H8L6 949 aa14.92□□□□□ -0.02
TPM1-230ENST00000561266 APOBEC3GQ9HC16 384 aaKnown RBP14.92□□□□□ -0.02
TPM1-230ENST00000561266 DDX43Q9NXZ2 648 aaKnown RBP14.92□□□□□ -0.02
TPM1-230ENST00000561266 DSEQ9UL01 958 aa14.92□□□□□ -0.02
TPM1-230ENST00000561266 CLUHO75153 1309 aa14.92□□□□□ -0.02
TPM1-230ENST00000561266 PRRG1O14668 218 aa14.91□□□□□ -0.02
TPM1-230ENST00000561266 IKBKBO14920 756 aa14.91□□□□□ -0.02
TPM1-230ENST00000561266 CETN3O15182 167 aa14.91□□□□□ -0.02
TPM1-230ENST00000561266 PHACTR2O75167 634 aa14.91□□□□□ -0.02
TPM1-230ENST00000561266 STAU1O95793 577 aaKnown RBP14.91□□□□□ -0.02
TPM1-230ENST00000561266 HNRNPA1P09651 372 aaKnown RBP eCLIP14.91□□□□□ -0.02
TPM1-230ENST00000561266 RAP1GAPP47736 663 aa14.91□□□□□ -0.02
TPM1-230ENST00000561266 FKBP3Q00688 224 aaKnown RBP14.91□□□□□ -0.02
TPM1-230ENST00000561266 LRRC63Q05C16 580 aa14.91□□□□□ -0.02
TPM1-230ENST00000561266 TWF1Q12792 350 aa14.91□□□□□ -0.02
TPM1-230ENST00000561266 MYO1EQ12965 1108 aa14.91□□□□□ -0.02
TPM1-230ENST00000561266 NCOA4Q13772 614 aa14.91□□□□□ -0.02
TPM1-230ENST00000561266 WDR72Q3MJ13 1102 aa14.91□□□□□ -0.02
TPM1-230ENST00000561266 STKLD1Q8NE28 680 aa14.91□□□□□ -0.02
TPM1-230ENST00000561266 TAS1R2Q8TE23 839 aa14.91□□□□□ -0.02
TPM1-230ENST00000561266 GBP4Q96PP9 640 aa14.91□□□□□ -0.02
TPM1-230ENST00000561266 SMOC2Q9H3U7 446 aa14.91□□□□□ -0.02
TPM1-230ENST00000561266 PIDD1Q9HB75 910 aa14.91□□□□□ -0.02
TPM1-230ENST00000561266 CRTAC1Q9NQ79 661 aa14.91□□□□□ -0.02
TPM1-230ENST00000561266 NXF1Q9UBU9 619 aaKnown RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms