RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 TSSK4Q6SA08 328 aa11.64□□□□□ -0.55
TPM1-227ENST00000560970 ZPBP2Q6X784 338 aa11.64□□□□□ -0.55
TPM1-227ENST00000560970 MAP4K3Q8IVH8 894 aa11.64□□□□□ -0.55
TPM1-227ENST00000560970 ZNF687Q8N1G0 1237 aa11.64□□□□□ -0.55
TPM1-227ENST00000560970 FSIP1Q8NA03 581 aa11.64□□□□□ -0.55
TPM1-227ENST00000560970 IQUBQ8NA54 791 aa11.64□□□□□ -0.55
TPM1-227ENST00000560970 GLIS3Q8NEA6 775 aa11.64□□□□□ -0.55
TPM1-227ENST00000560970 ZSCAN18Q8TBC5 510 aaPredicted RBP11.64□□□□□ -0.55
TPM1-227ENST00000560970 HPS3Q969F9 1004 aa11.64□□□□□ -0.55
TPM1-227ENST00000560970 MSANTD3Q96H12 275 aa11.64□□□□□ -0.55
TPM1-227ENST00000560970 STRA6Q9BX79 667 aa11.64□□□□□ -0.55
TPM1-227ENST00000560970 BLZF1Q9H2G9 400 aa11.64□□□□□ -0.55
TPM1-227ENST00000560970 TRPV5Q9NQA5 729 aa11.64□□□□□ -0.55
TPM1-227ENST00000560970 GMEB2Q9UKD1 530 aa11.64□□□□□ -0.55
TPM1-227ENST00000560970 CIZ1Q9ULV3 898 aaPredicted RBP11.64□□□□□ -0.55
TPM1-227ENST00000560970 TBX20Q9UMR3 447 aa11.64□□□□□ -0.55
TPM1-227ENST00000560970 PIAS3Q9Y6X2 628 aa11.64□□□□□ -0.55
TPM1-227ENST00000560970 PTPRDP23468 1912 aa11.64□□□□□ -0.55
TPM1-227ENST00000560970 ANAPC1Q9H1A4 1944 aa11.64□□□□□ -0.55
TPM1-227ENST00000560970 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.63□□□□□ -0.55
TPM1-227ENST00000560970 A0A1W2PQ27 194 aa11.63□□□□□ -0.55
TPM1-227ENST00000560970 A0A1W2PQ64 194 aa11.63□□□□□ -0.55
TPM1-227ENST00000560970 A0A1W2PQD8 194 aa11.63□□□□□ -0.55
TPM1-227ENST00000560970 H0YCG3 227 aa11.63□□□□□ -0.55
TPM1-227ENST00000560970 NRG2O14511 850 aaPredicted RBP11.63□□□□□ -0.55
TPM1-227ENST00000560970 MYL4P12829 197 aa11.63□□□□□ -0.55
TPM1-227ENST00000560970 TDGF1P13385 188 aa11.63□□□□□ -0.55
TPM1-227ENST00000560970 GAP43P17677 238 aa11.63□□□□□ -0.55
TPM1-227ENST00000560970 SDHBP21912 280 aa11.63□□□□□ -0.55
TPM1-227ENST00000560970 GDI1P31150 447 aa11.63□□□□□ -0.55
TPM1-227ENST00000560970 AFMP43652 599 aa11.63□□□□□ -0.55
TPM1-227ENST00000560970 CCR3P51677 355 aa11.63□□□□□ -0.55
TPM1-227ENST00000560970 ASIC1P78348 528 aa11.63□□□□□ -0.55
TPM1-227ENST00000560970 PPP2R3AQ06190 1150 aa11.63□□□□□ -0.55
TPM1-227ENST00000560970 MCL1Q07820 350 aa11.63□□□□□ -0.55
TPM1-227ENST00000560970 KCNA1Q09470 495 aa11.63□□□□□ -0.55
TPM1-227ENST00000560970 CUL4BQ13620 913 aa11.63□□□□□ -0.55
TPM1-227ENST00000560970 SLC10A6Q3KNW5 377 aa11.63□□□□□ -0.55
TPM1-227ENST00000560970 SEZ6Q53EL9 994 aa11.63□□□□□ -0.55
TPM1-227ENST00000560970 CNNM4Q6P4Q7 775 aa11.63□□□□□ -0.55
TPM1-227ENST00000560970 RNF19BQ6ZMZ0 732 aa11.63□□□□□ -0.55
TPM1-227ENST00000560970 ZNF720Q7Z2F6 126 aa11.63□□□□□ -0.55
TPM1-227ENST00000560970 HS6ST3Q8IZP7 471 aa11.63□□□□□ -0.55
TPM1-227ENST00000560970 BEST2Q8NFU1 509 aa11.63□□□□□ -0.55
TPM1-227ENST00000560970 BICD1Q96G01 975 aa11.63□□□□□ -0.55
TPM1-227ENST00000560970 ZNF512Q96ME7 567 aaPredicted RBP11.63□□□□□ -0.55
TPM1-227ENST00000560970 C7orf25Q9BPX7 421 aa11.63□□□□□ -0.55
TPM1-227ENST00000560970 OXCT2Q9BYC2 517 aaPredicted RBP11.63□□□□□ -0.55
TPM1-227ENST00000560970 ST6GALNAC4Q9H4F1 302 aa11.63□□□□□ -0.55
TPM1-227ENST00000560970 SLITRK6Q9H5Y7 841 aa11.63□□□□□ -0.55
TPM1-227ENST00000560970 MAGEF1Q9HAY2 307 aa11.63□□□□□ -0.55
TPM1-227ENST00000560970 TRPV4Q9HBA0 871 aa11.63□□□□□ -0.55
TPM1-227ENST00000560970 ZNF334Q9HCZ1 680 aaPredicted RBP11.63□□□□□ -0.55
TPM1-227ENST00000560970 OLFML3Q9NRN5 406 aa11.63□□□□□ -0.55
TPM1-227ENST00000560970 PANK4Q9NVE7 773 aa11.63□□□□□ -0.55
TPM1-227ENST00000560970 CEP72Q9P209 647 aa11.63□□□□□ -0.55
TPM1-227ENST00000560970 SEL1LQ9UBV2 794 aa11.63□□□□□ -0.55
TPM1-227ENST00000560970 KCNG1Q9UIX4 513 aa11.63□□□□□ -0.55
TPM1-227ENST00000560970 CDV3Q9UKY7 258 aaKnown RBP11.63□□□□□ -0.55
TPM1-227ENST00000560970 ANKRD63C9JTQ0 380 aa11.62□□□□□ -0.55
TPM1-227ENST00000560970 M0QZQ0 153 aa11.62□□□□□ -0.55
TPM1-227ENST00000560970 ARNTLO00327 626 aa11.62□□□□□ -0.55
TPM1-227ENST00000560970 HNRNPDLO14979 420 aaKnown RBP11.62□□□□□ -0.55
TPM1-227ENST00000560970 CLDN3O15551 220 aa11.62□□□□□ -0.55
TPM1-227ENST00000560970 XPOTO43592 962 aaKnown RBP11.62□□□□□ -0.55
TPM1-227ENST00000560970 FAM189A1O60320 539 aa11.62□□□□□ -0.55
TPM1-227ENST00000560970 MOSPD3O75425 235 aa11.62□□□□□ -0.55
TPM1-227ENST00000560970 GCNT3O95395 438 aa11.62□□□□□ -0.55
TPM1-227ENST00000560970 PRR29P0C7W0 189 aa11.62□□□□□ -0.55
TPM1-227ENST00000560970 LRPAP1P30533 357 aa11.62□□□□□ -0.55
TPM1-227ENST00000560970 TNFSF9P41273 254 aa11.62□□□□□ -0.55
TPM1-227ENST00000560970 MATR3P43243 847 aaKnown RBP eCLIP11.62□□□□□ -0.55
TPM1-227ENST00000560970 AARSP49588 968 aaKnown RBP eCLIP11.62□□□□□ -0.55
TPM1-227ENST00000560970 LIG4P49917 911 aa11.62□□□□□ -0.55
TPM1-227ENST00000560970 EHHADHQ08426 723 aa11.62□□□□□ -0.55
TPM1-227ENST00000560970 FZD5Q13467 585 aa11.62□□□□□ -0.55
TPM1-227ENST00000560970 TEAD2Q15562 447 aa11.62□□□□□ -0.55
TPM1-227ENST00000560970 C1orf228Q6PIY5 440 aa11.62□□□□□ -0.55
TPM1-227ENST00000560970 TMC8Q8IU68 726 aa11.62□□□□□ -0.55
TPM1-227ENST00000560970 CCDC65Q8IXS2 484 aa11.62□□□□□ -0.55
TPM1-227ENST00000560970 TMEM130Q8N3G9 435 aa11.62□□□□□ -0.55
TPM1-227ENST00000560970 SHKBP1Q8TBC3 707 aa11.62□□□□□ -0.55
TPM1-227ENST00000560970 FAM3CQ92520 227 aa11.62□□□□□ -0.55
TPM1-227ENST00000560970 E2F7Q96AV8 911 aa11.62□□□□□ -0.55
TPM1-227ENST00000560970 ZSWIM3Q96MP5 696 aa11.62□□□□□ -0.55
TPM1-227ENST00000560970 MRPL44Q9H9J2 332 aaKnown RBP11.62□□□□□ -0.55
TPM1-227ENST00000560970 PLEKHA5Q9HAU0 1116 aa11.62□□□□□ -0.55
TPM1-227ENST00000560970 USP18Q9UMW8 372 aa11.62□□□□□ -0.55
TPM1-227ENST00000560970 UBQLN1Q9UMX0 589 aaKnown RBP11.62□□□□□ -0.55
TPM1-227ENST00000560970 TTC26A0AVF1 554 aa11.61□□□□□ -0.55
TPM1-227ENST00000560970 OR6C75A6NL08 312 aa11.61□□□□□ -0.55
TPM1-227ENST00000560970 PRR5-ARHGAP8B1AHC4 643 aa11.61□□□□□ -0.55
TPM1-227ENST00000560970 ZNF263O14978 683 aa11.61□□□□□ -0.55
TPM1-227ENST00000560970 KLRC4O43908 158 aa11.61□□□□□ -0.55
TPM1-227ENST00000560970 PRPF6O94906 941 aaKnown RBP11.61□□□□□ -0.55
TPM1-227ENST00000560970 OAZ2O95190 189 aa11.61□□□□□ -0.55
TPM1-227ENST00000560970 CLTAP09496 248 aa11.61□□□□□ -0.55
TPM1-227ENST00000560970 SLFN14P0C7P3 912 aa11.61□□□□□ -0.55
TPM1-227ENST00000560970 GJA1P17302 382 aa11.61□□□□□ -0.55
TPM1-227ENST00000560970 SYKP43405 635 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms