RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 FAM83CQ9BQN1 747 aa20.16■□□□□ 0.82
TPM1-226ENST00000560959 PDCD11Q14690 1871 aaKnown RBP20.16■□□□□ 0.82
TPM1-226ENST00000560959 E9PMD0 336 aa20.15■□□□□ 0.82
TPM1-226ENST00000560959 HARSP12081 509 aaKnown RBP20.15■□□□□ 0.82
TPM1-226ENST00000560959 GUCY2CP25092 1073 aa20.15■□□□□ 0.82
TPM1-226ENST00000560959 HOXC13P31276 330 aa20.15■□□□□ 0.82
TPM1-226ENST00000560959 MPLP40238 635 aa20.15■□□□□ 0.82
TPM1-226ENST00000560959 FOSBP53539 338 aa20.15■□□□□ 0.82
TPM1-226ENST00000560959 SMTNP53814 917 aa20.15■□□□□ 0.82
TPM1-226ENST00000560959 DSTYKQ6XUX3 929 aa20.15■□□□□ 0.82
TPM1-226ENST00000560959 TMEM161BQ8NDZ6 487 aa20.15■□□□□ 0.82
TPM1-226ENST00000560959 SNX29Q8TEQ0 813 aa20.15■□□□□ 0.82
TPM1-226ENST00000560959 KCNN1Q92952 543 aa20.15■□□□□ 0.82
TPM1-226ENST00000560959 KIF12Q96FN5 646 aa20.15■□□□□ 0.82
TPM1-226ENST00000560959 ANKFY1Q9P2R3 1169 aa20.15■□□□□ 0.82
TPM1-226ENST00000560959 CITO14578 2027 aa20.14■□□□□ 0.81
TPM1-226ENST00000560959 SOBPA7XYQ1 873 aa20.14■□□□□ 0.81
TPM1-226ENST00000560959 PRAMEF12O95522 483 aa20.14■□□□□ 0.81
TPM1-226ENST00000560959 ADRB2P07550 413 aa20.14■□□□□ 0.81
TPM1-226ENST00000560959 CXCL8P10145 99 aa20.14■□□□□ 0.81
TPM1-226ENST00000560959 SMARCB1Q12824 385 aa20.14■□□□□ 0.81
TPM1-226ENST00000560959 RUNX3Q13761 415 aa20.14■□□□□ 0.81
TPM1-226ENST00000560959 CCDC6Q16204 474 aa20.14■□□□□ 0.81
TPM1-226ENST00000560959 PLK5Q496M5 336 aa20.14■□□□□ 0.81
TPM1-226ENST00000560959 SEZ6Q53EL9 994 aa20.14■□□□□ 0.81
TPM1-226ENST00000560959 RNF43Q68DV7 783 aa20.14■□□□□ 0.81
TPM1-226ENST00000560959 PKN3Q6P5Z2 889 aa20.14■□□□□ 0.81
TPM1-226ENST00000560959 KCTD17Q8N5Z5 321 aa20.14■□□□□ 0.81
TPM1-226ENST00000560959 RUSC1Q9BVN2 902 aa20.14■□□□□ 0.81
TPM1-226ENST00000560959 GKN1Q9NS71 199 aa20.14■□□□□ 0.81
TPM1-226ENST00000560959 FRYQ5TBA9 3013 aa20.13■□□□□ 0.81
TPM1-226ENST00000560959 MAPTP10636 758 aaKnown RBP20.13■□□□□ 0.81
TPM1-226ENST00000560959 PLS3P13797 630 aa20.13■□□□□ 0.81
TPM1-226ENST00000560959 PXNP49023 591 aaPredicted RBP20.13■□□□□ 0.81
TPM1-226ENST00000560959 LILRA4P59901 499 aa20.13■□□□□ 0.81
TPM1-226ENST00000560959 VEPH1Q14D04 833 aa20.13■□□□□ 0.81
TPM1-226ENST00000560959 FBXO43Q4G163 708 aa20.13■□□□□ 0.81
TPM1-226ENST00000560959 KRT79Q5XKE5 535 aa20.13■□□□□ 0.81
TPM1-226ENST00000560959 FSTL4Q6MZW2 842 aa20.13■□□□□ 0.81
TPM1-226ENST00000560959 EXOC4Q96A65 974 aa20.13■□□□□ 0.81
TPM1-226ENST00000560959 C8orf76Q96K31 380 aa20.13■□□□□ 0.81
TPM1-226ENST00000560959 GCNAQ96QF7 691 aa20.13■□□□□ 0.81
TPM1-226ENST00000560959 SLC46A2Q9BY10 475 aa20.13■□□□□ 0.81
TPM1-226ENST00000560959 IL21Q9HBE4 155 aa20.13■□□□□ 0.81
TPM1-226ENST00000560959 SFI1A8K8P3 1242 aa20.12■□□□□ 0.81
TPM1-226ENST00000560959 H0YCG3 227 aa20.12■□□□□ 0.81
TPM1-226ENST00000560959 RHOBTB1O94844 696 aa20.12■□□□□ 0.81
TPM1-226ENST00000560959 CYP11A1P05108 521 aa20.12■□□□□ 0.81
TPM1-226ENST00000560959 ODC1P11926 461 aa20.12■□□□□ 0.81
TPM1-226ENST00000560959 DRD1P21728 446 aa20.12■□□□□ 0.81
TPM1-226ENST00000560959 DDX6P26196 483 aaKnown RBP eCLIP20.12■□□□□ 0.81
TPM1-226ENST00000560959 GUCY1B3Q02153 619 aa20.12■□□□□ 0.81
TPM1-226ENST00000560959 PPP2R3AQ06190 1150 aa20.12■□□□□ 0.81
TPM1-226ENST00000560959 KARSQ15046 597 aaKnown RBP20.12■□□□□ 0.81
TPM1-226ENST00000560959 CMTM8Q8IZV2 173 aa20.12■□□□□ 0.81
TPM1-226ENST00000560959 TTC9BQ8N6N2 239 aa20.12■□□□□ 0.81
TPM1-226ENST00000560959 KDF1Q8NAX2 398 aaPredicted RBP20.12■□□□□ 0.81
TPM1-226ENST00000560959 C2orf15Q8WU43 125 aaKnown RBP20.12■□□□□ 0.81
TPM1-226ENST00000560959 SENP8Q96LD8 212 aa20.12■□□□□ 0.81
TPM1-226ENST00000560959 DUSP15Q9H1R2 295 aaPredicted RBP20.12■□□□□ 0.81
TPM1-226ENST00000560959 EBF1Q9UH73 591 aa20.12■□□□□ 0.81
TPM1-226ENST00000560959 NOL7Q9UMY1 257 aaKnown RBP20.12■□□□□ 0.81
TPM1-226ENST00000560959 SDK1Q7Z5N4 2213 aa20.12■□□□□ 0.81
TPM1-226ENST00000560959 LAMA1P25391 3075 aa20.12■□□□□ 0.81
TPM1-226ENST00000560959 FAM208BQ5VWN6 2430 aa20.11■□□□□ 0.81
TPM1-226ENST00000560959 LACTBL1A8MY62 500 aa20.11■□□□□ 0.81
TPM1-226ENST00000560959 LAD1O00515 517 aa20.11■□□□□ 0.81
TPM1-226ENST00000560959 SPAG1Q07617 926 aa20.11■□□□□ 0.81
TPM1-226ENST00000560959 ELF2Q15723 593 aa20.11■□□□□ 0.81
TPM1-226ENST00000560959 SPATA1Q5VX52 437 aa20.11■□□□□ 0.81
TPM1-226ENST00000560959 PSAPL1Q6NUJ1 521 aa20.11■□□□□ 0.81
TPM1-226ENST00000560959 CD302Q8IX05 232 aa20.11■□□□□ 0.81
TPM1-226ENST00000560959 FBXO18Q8NFZ0 1043 aa20.11■□□□□ 0.81
TPM1-226ENST00000560959 HAPLN2Q9GZV7 340 aa20.11■□□□□ 0.81
TPM1-226ENST00000560959 KIF9Q9HAQ2 790 aa20.11■□□□□ 0.81
TPM1-226ENST00000560959 HPS4Q9NQG7 708 aa20.11■□□□□ 0.81
TPM1-226ENST00000560959 SH2B1Q9NRF2 756 aaPredicted RBP20.11■□□□□ 0.81
TPM1-226ENST00000560959 KCND2Q9NZV8 630 aa20.11■□□□□ 0.81
TPM1-226ENST00000560959 CEP295Q9C0D2 2601 aa20.11■□□□□ 0.81
TPM1-226ENST00000560959 NUP210Q8TEM1 1887 aaPredicted RBP20.11■□□□□ 0.81
TPM1-226ENST00000560959 SOAT2O75908 522 aa20.1■□□□□ 0.81
TPM1-226ENST00000560959 SCP2P22307 547 aa20.1■□□□□ 0.81
TPM1-226ENST00000560959 CYP4F8P98187 520 aa20.1■□□□□ 0.81
TPM1-226ENST00000560959 DAB2IPQ5VWQ8 1189 aa20.1■□□□□ 0.81
TPM1-226ENST00000560959 UNQ6494/PRO21346Q6UXR6 183 aa20.1■□□□□ 0.81
TPM1-226ENST00000560959 SYT13Q7L8C5 426 aa20.1■□□□□ 0.81
TPM1-226ENST00000560959 CHFRQ96EP1 664 aa20.1■□□□□ 0.81
TPM1-226ENST00000560959 LPIN3Q9BQK8 851 aa20.1■□□□□ 0.81
TPM1-226ENST00000560959 ZCWPW1Q9H0M4 648 aa20.1■□□□□ 0.81
TPM1-226ENST00000560959 DSEQ9UL01 958 aa20.1■□□□□ 0.81
TPM1-226ENST00000560959 ASPMQ8IZT6 3477 aa20.1■□□□□ 0.81
TPM1-226ENST00000560959 SPAG17Q6Q759 2223 aa20.1■□□□□ 0.81
TPM1-226ENST00000560959 BCLAF3A2AJT9 711 aaKnown RBP20.09■□□□□ 0.81
TPM1-226ENST00000560959 TMEM8BA6NDV4 472 aa20.09■□□□□ 0.81
TPM1-226ENST00000560959 RNF40O75150 1001 aa20.09■□□□□ 0.81
TPM1-226ENST00000560959 ATF6P18850 670 aa20.09■□□□□ 0.81
TPM1-226ENST00000560959 AVPR1AP37288 418 aa20.09■□□□□ 0.81
TPM1-226ENST00000560959 PRPHP41219 470 aa20.09■□□□□ 0.81
TPM1-226ENST00000560959 MATR3P43243 847 aaKnown RBP eCLIP20.09■□□□□ 0.81
TPM1-226ENST00000560959 TAF12Q16514 161 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 138.9 ms