RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 KLHL7Q8IXQ5 586 aa11.57□□□□□ -0.56
SNRPA1-211ENST00000560433 GSPT2Q8IYD1 628 aaKnown RBP11.57□□□□□ -0.56
SNRPA1-211ENST00000560433 PCSK9Q8NBP7 692 aaKnown RBP11.57□□□□□ -0.56
SNRPA1-211ENST00000560433 GAD1Q99259 594 aa11.57□□□□□ -0.56
SNRPA1-211ENST00000560433 HMX1Q9NP08 348 aaPredicted RBP11.57□□□□□ -0.56
SNRPA1-211ENST00000560433 FAM49BQ9NUQ9 324 aa11.57□□□□□ -0.56
SNRPA1-211ENST00000560433 MIOSQ9NXC5 875 aa11.57□□□□□ -0.56
SNRPA1-211ENST00000560433 PADI3Q9ULW8 664 aa11.57□□□□□ -0.56
SNRPA1-211ENST00000560433 PTGESO14684 152 aa11.56□□□□□ -0.56
SNRPA1-211ENST00000560433 SPOPO43791 374 aa11.56□□□□□ -0.56
SNRPA1-211ENST00000560433 PDGFRBP09619 1106 aa11.56□□□□□ -0.56
SNRPA1-211ENST00000560433 ITGA4P13612 1032 aa11.56□□□□□ -0.56
SNRPA1-211ENST00000560433 MGAT3Q09327 533 aa11.56□□□□□ -0.56
SNRPA1-211ENST00000560433 C9orf57Q5W0N0 161 aa11.56□□□□□ -0.56
SNRPA1-211ENST00000560433 ACOT1Q86TX2 421 aa11.56□□□□□ -0.56
SNRPA1-211ENST00000560433 REM2Q8IYK8 340 aaPredicted RBP11.56□□□□□ -0.56
SNRPA1-211ENST00000560433 BEST2Q8NFU1 509 aa11.56□□□□□ -0.56
SNRPA1-211ENST00000560433 TMEM176AQ96HP8 235 aa11.56□□□□□ -0.56
SNRPA1-211ENST00000560433 GLT1D1Q96MS3 346 aa11.56□□□□□ -0.56
SNRPA1-211ENST00000560433 GDAP1L1Q96MZ0 367 aa11.56□□□□□ -0.56
SNRPA1-211ENST00000560433 DPEP3Q9H4B8 488 aa11.56□□□□□ -0.56
SNRPA1-211ENST00000560433 PLEKHA5Q9HAU0 1116 aa11.56□□□□□ -0.56
SNRPA1-211ENST00000560433 FAM105AQ9NUU6 356 aa11.56□□□□□ -0.56
SNRPA1-211ENST00000560433 ZNF446Q9NWS9 450 aa11.56□□□□□ -0.56
SNRPA1-211ENST00000560433 USTQ9Y2C2 406 aa11.56□□□□□ -0.56
SNRPA1-211ENST00000560433 NR2E1Q9Y466 385 aa11.56□□□□□ -0.56
SNRPA1-211ENST00000560433 TLR3O15455 904 aaKnown RBP11.56□□□□□ -0.56
SNRPA1-211ENST00000560433 H2AFXP16104 143 aaPredicted RBP11.56□□□□□ -0.56
SNRPA1-211ENST00000560433 ATICP31939 592 aa11.56□□□□□ -0.56
SNRPA1-211ENST00000560433 GJC1P36383 396 aa11.56□□□□□ -0.56
SNRPA1-211ENST00000560433 PTPN11Q06124 597 aaPredicted RBP11.56□□□□□ -0.56
SNRPA1-211ENST00000560433 MYO1EQ12965 1108 aa11.56□□□□□ -0.56
SNRPA1-211ENST00000560433 PTP4A2Q12974 167 aa11.56□□□□□ -0.56
SNRPA1-211ENST00000560433 CCDC142Q17RM4 750 aa11.56□□□□□ -0.56
SNRPA1-211ENST00000560433 APBB1IPQ7Z5R6 666 aaPredicted RBP11.56□□□□□ -0.56
SNRPA1-211ENST00000560433 PAAF1Q9BRP4 392 aa11.56□□□□□ -0.56
SNRPA1-211ENST00000560433 CFHR5Q9BXR6 569 aa11.56□□□□□ -0.56
SNRPA1-211ENST00000560433 DMGDHQ9UI17 866 aaKnown RBP11.56□□□□□ -0.56
SNRPA1-211ENST00000560433 ZSCAN5CA6NGD5 496 aaPredicted RBP11.55□□□□□ -0.56
SNRPA1-211ENST00000560433 GOLGA8SH3BPF8 625 aa11.55□□□□□ -0.56
SNRPA1-211ENST00000560433 LMO2P25791 158 aa11.55□□□□□ -0.56
SNRPA1-211ENST00000560433 CST5P28325 142 aaPredicted RBP11.55□□□□□ -0.56
SNRPA1-211ENST00000560433 MAMLD1Q13495 774 aa11.55□□□□□ -0.56
SNRPA1-211ENST00000560433 MTFR1Q15390 333 aa11.55□□□□□ -0.56
SNRPA1-211ENST00000560433 SOWAHAQ2M3V2 549 aa11.55□□□□□ -0.56
SNRPA1-211ENST00000560433 CD302Q8IX05 232 aa11.55□□□□□ -0.56
SNRPA1-211ENST00000560433 GSTCDQ8NEC7 633 aa11.55□□□□□ -0.56
SNRPA1-211ENST00000560433 OR6B3Q8NGW1 331 aa11.55□□□□□ -0.56
SNRPA1-211ENST00000560433 PXYLP1Q8TE99 480 aa11.55□□□□□ -0.56
SNRPA1-211ENST00000560433 KRT12Q99456 494 aa11.55□□□□□ -0.56
SNRPA1-211ENST00000560433 ATP8B3O60423 1300 aa11.55□□□□□ -0.56
SNRPA1-211ENST00000560433 A0A1W2PQ45 241 aaPredicted RBP11.55□□□□□ -0.56
SNRPA1-211ENST00000560433 A0A1W2PQY0 241 aa11.55□□□□□ -0.56
SNRPA1-211ENST00000560433 M0QYV0 167 aa11.55□□□□□ -0.56
SNRPA1-211ENST00000560433 FGGP02679 453 aa11.55□□□□□ -0.56
SNRPA1-211ENST00000560433 CYP3A5P20815 502 aa11.55□□□□□ -0.56
SNRPA1-211ENST00000560433 SSR1P43307 286 aaKnown RBP11.55□□□□□ -0.56
SNRPA1-211ENST00000560433 NKX3-2P78367 333 aa11.55□□□□□ -0.56
SNRPA1-211ENST00000560433 LPIN1Q14693 890 aa11.55□□□□□ -0.56
SNRPA1-211ENST00000560433 PCBP1Q15365 356 aaKnown RBP eCLIP11.55□□□□□ -0.56
SNRPA1-211ENST00000560433 PTPN20Q4JDL3 420 aa11.55□□□□□ -0.56
SNRPA1-211ENST00000560433 PAN2Q504Q3 1202 aaKnown RBP11.55□□□□□ -0.56
SNRPA1-211ENST00000560433 FBXO47Q5MNV8 452 aa11.55□□□□□ -0.56
SNRPA1-211ENST00000560433 CPXM1Q96SM3 734 aa11.55□□□□□ -0.56
SNRPA1-211ENST00000560433 UNC93B1Q9H1C4 597 aa11.55□□□□□ -0.56
SNRPA1-211ENST00000560433 STARD7Q9NQZ5 370 aa11.55□□□□□ -0.56
SNRPA1-211ENST00000560433 ST7Q9NRC1 585 aa11.55□□□□□ -0.56
SNRPA1-211ENST00000560433 UBQLN1Q9UMX0 589 aaKnown RBP11.55□□□□□ -0.56
SNRPA1-211ENST00000560433 TULP2O00295 520 aa11.54□□□□□ -0.56
SNRPA1-211ENST00000560433 MICAL2O94851 1124 aa11.54□□□□□ -0.56
SNRPA1-211ENST00000560433 POMCP01189 267 aa11.54□□□□□ -0.56
SNRPA1-211ENST00000560433 FGFR1P11362 822 aa11.54□□□□□ -0.56
SNRPA1-211ENST00000560433 P4HA1P13674 534 aa11.54□□□□□ -0.56
SNRPA1-211ENST00000560433 TCF4P15884 667 aa11.54□□□□□ -0.56
SNRPA1-211ENST00000560433 MMP8P22894 467 aa11.54□□□□□ -0.56
SNRPA1-211ENST00000560433 SCNN1GP51170 649 aa11.54□□□□□ -0.56
SNRPA1-211ENST00000560433 PAK2Q13177 524 aa11.54□□□□□ -0.56
SNRPA1-211ENST00000560433 TRADDQ15628 312 aa11.54□□□□□ -0.56
SNRPA1-211ENST00000560433 PPP1R26Q5T8A7 1209 aaPredicted RBP11.54□□□□□ -0.56
SNRPA1-211ENST00000560433 ERICH1Q86X53 443 aa11.54□□□□□ -0.56
SNRPA1-211ENST00000560433 NT5DC4Q86YG4 428 aa11.54□□□□□ -0.56
SNRPA1-211ENST00000560433 USP38Q8NB14 1042 aa11.54□□□□□ -0.56
SNRPA1-211ENST00000560433 TMEM35BQ8NCS4 154 aa11.54□□□□□ -0.56
SNRPA1-211ENST00000560433 MCEEQ96PE7 176 aa11.54□□□□□ -0.56
SNRPA1-211ENST00000560433 DDX47Q9H0S4 455 aaKnown RBP11.54□□□□□ -0.56
SNRPA1-211ENST00000560433 VRTNQ9H8Y1 702 aa11.54□□□□□ -0.56
SNRPA1-211ENST00000560433 UVRAGQ9P2Y5 699 aa11.54□□□□□ -0.56
SNRPA1-211ENST00000560433 BARX2Q9UMQ3 279 aaPredicted RBP11.54□□□□□ -0.56
SNRPA1-211ENST00000560433 INPP5FQ9Y2H2 1132 aa11.54□□□□□ -0.56
SNRPA1-211ENST00000560433 TIMM13Q9Y5L4 95 aaPredicted RBP11.54□□□□□ -0.56
SNRPA1-211ENST00000560433 ESYT3A0FGR9 886 aa11.54□□□□□ -0.56
SNRPA1-211ENST00000560433 CASTOR2A6NHX0 329 aa11.54□□□□□ -0.56
SNRPA1-211ENST00000560433 SPDYE4A6NLX3 237 aa11.54□□□□□ -0.56
SNRPA1-211ENST00000560433 KPNA7A9QM74 516 aa11.54□□□□□ -0.56
SNRPA1-211ENST00000560433 MYO1FO00160 1098 aa11.54□□□□□ -0.56
SNRPA1-211ENST00000560433 MYBL2P10244 700 aa11.54□□□□□ -0.56
SNRPA1-211ENST00000560433 PYGMP11217 842 aa11.54□□□□□ -0.56
SNRPA1-211ENST00000560433 RGS7P49802 495 aa11.54□□□□□ -0.56
SNRPA1-211ENST00000560433 YWHAEP62258 255 aaKnown RBP11.54□□□□□ -0.56
SNRPA1-211ENST00000560433 POU5F1Q01860 360 aaKnown RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms