RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 SPTLC1O15269 473 aa12.91□□□□□ -0.34
RABGGTA-215ENST00000560207 TEX28O15482 410 aa12.91□□□□□ -0.34
RABGGTA-215ENST00000560207 CLASP2O75122 1294 aaKnown RBP12.91□□□□□ -0.34
RABGGTA-215ENST00000560207 VNN1O95497 513 aa12.91□□□□□ -0.34
RABGGTA-215ENST00000560207 WARSP23381 471 aaKnown RBP12.91□□□□□ -0.34
RABGGTA-215ENST00000560207 ELF1P32519 619 aa12.91□□□□□ -0.34
RABGGTA-215ENST00000560207 OR1D2P34982 312 aa12.91□□□□□ -0.34
RABGGTA-215ENST00000560207 CLCN4P51793 760 aa12.91□□□□□ -0.34
RABGGTA-215ENST00000560207 NOP14P78316 857 aaKnown RBP12.91□□□□□ -0.34
RABGGTA-215ENST00000560207 GPR17Q13304 367 aa12.91□□□□□ -0.34
RABGGTA-215ENST00000560207 ADAM15Q13444 863 aa12.91□□□□□ -0.34
RABGGTA-215ENST00000560207 SOWAHAQ2M3V2 549 aa12.91□□□□□ -0.34
RABGGTA-215ENST00000560207 CTC1Q2NKJ3 1217 aa12.91□□□□□ -0.34
RABGGTA-215ENST00000560207 ENOSF1Q7L5Y1 443 aa12.91□□□□□ -0.34
RABGGTA-215ENST00000560207 IRF2BP1Q8IU81 584 aa12.91□□□□□ -0.34
RABGGTA-215ENST00000560207 CREBRFQ8IUR6 639 aa12.91□□□□□ -0.34
RABGGTA-215ENST00000560207 ADGRF2Q8IZF7 708 aa12.91□□□□□ -0.34
RABGGTA-215ENST00000560207 PDCL2Q8N4E4 241 aa12.91□□□□□ -0.34
RABGGTA-215ENST00000560207 HLA-CQ95604 372 aa12.91□□□□□ -0.34
RABGGTA-215ENST00000560207 TNIP3Q96KP6 325 aa12.91□□□□□ -0.34
RABGGTA-215ENST00000560207 CEP295NLQ96MC4 621 aa12.91□□□□□ -0.34
RABGGTA-215ENST00000560207 NT5C1BQ96P26 610 aa12.91□□□□□ -0.34
RABGGTA-215ENST00000560207 CLSTN3Q9BQT9 956 aa12.91□□□□□ -0.34
RABGGTA-215ENST00000560207 NIF3L1Q9GZT8 377 aa12.91□□□□□ -0.34
RABGGTA-215ENST00000560207 SNX25Q9H3E2 840 aa12.91□□□□□ -0.34
RABGGTA-215ENST00000560207 AFF4Q9UHB7 1163 aaKnown RBP12.91□□□□□ -0.34
RABGGTA-215ENST00000560207 FBXL5Q9UKA1 691 aa12.91□□□□□ -0.34
RABGGTA-215ENST00000560207 CDH9Q9ULB4 789 aa12.91□□□□□ -0.34
RABGGTA-215ENST00000560207 CDY1Q9Y6F8 540 aa12.91□□□□□ -0.34
RABGGTA-215ENST00000560207 I3L4J1 428 aa12.9□□□□□ -0.34
RABGGTA-215ENST00000560207 ABLIM3O94929 683 aa12.9□□□□□ -0.34
RABGGTA-215ENST00000560207 POU2F2P09086 479 aa12.9□□□□□ -0.34
RABGGTA-215ENST00000560207 HNRNPA1P09651 372 aaKnown RBP eCLIP12.9□□□□□ -0.34
RABGGTA-215ENST00000560207 ATF2P15336 505 aa12.9□□□□□ -0.34
RABGGTA-215ENST00000560207 RFX1P22670 979 aa12.9□□□□□ -0.34
RABGGTA-215ENST00000560207 HOXA9P31269 272 aa12.9□□□□□ -0.34
RABGGTA-215ENST00000560207 GNL1P36915 607 aaPredicted RBP12.9□□□□□ -0.34
RABGGTA-215ENST00000560207 ITIH3Q06033 890 aa12.9□□□□□ -0.34
RABGGTA-215ENST00000560207 HYAL1Q12794 435 aa12.9□□□□□ -0.34
RABGGTA-215ENST00000560207 PLD1Q13393 1074 aa12.9□□□□□ -0.34
RABGGTA-215ENST00000560207 KCNC3Q14003 757 aa12.9□□□□□ -0.34
RABGGTA-215ENST00000560207 FILIP1LQ4L180 1135 aa12.9□□□□□ -0.34
RABGGTA-215ENST00000560207 VWA3BQ502W6 1294 aa12.9□□□□□ -0.34
RABGGTA-215ENST00000560207 FKBP15Q5T1M5 1219 aa12.9□□□□□ -0.34
RABGGTA-215ENST00000560207 LIN9Q5TKA1 542 aa12.9□□□□□ -0.34
RABGGTA-215ENST00000560207 WSCD1Q658N2 575 aa12.9□□□□□ -0.34
RABGGTA-215ENST00000560207 LILRA6Q6PI73 481 aa12.9□□□□□ -0.34
RABGGTA-215ENST00000560207 PRSS55Q6UWB4 352 aaPredicted RBP12.9□□□□□ -0.34
RABGGTA-215ENST00000560207 LRSAM1Q6UWE0 723 aa12.9□□□□□ -0.34
RABGGTA-215ENST00000560207 GBP6Q6ZN66 633 aa12.9□□□□□ -0.34
RABGGTA-215ENST00000560207 C4orf50Q6ZRC1 276 aa12.9□□□□□ -0.34
RABGGTA-215ENST00000560207 C11orf57Q6ZUT1 292 aaPredicted RBP12.9□□□□□ -0.34
RABGGTA-215ENST00000560207 MICALL1Q8N3F8 863 aa12.9□□□□□ -0.34
RABGGTA-215ENST00000560207 EHBP1Q8NDI1 1231 aa12.9□□□□□ -0.34
RABGGTA-215ENST00000560207 CMASQ8NFW8 434 aaPredicted RBP12.9□□□□□ -0.34
RABGGTA-215ENST00000560207 FAM200AQ8TCP9 573 aa12.9□□□□□ -0.34
RABGGTA-215ENST00000560207 SPPL2BQ8TCT7 592 aa12.9□□□□□ -0.34
RABGGTA-215ENST00000560207 TAS1R2Q8TE23 839 aa12.9□□□□□ -0.34
RABGGTA-215ENST00000560207 SLC22A17Q8WUG5 538 aa12.9□□□□□ -0.34
RABGGTA-215ENST00000560207 BCO2Q9BYV7 579 aa12.9□□□□□ -0.34
RABGGTA-215ENST00000560207 NDST4Q9H3R1 872 aa12.9□□□□□ -0.34
RABGGTA-215ENST00000560207 MMRN2Q9H8L6 949 aa12.9□□□□□ -0.34
RABGGTA-215ENST00000560207 ABCB6Q9NP58 842 aa12.9□□□□□ -0.34
RABGGTA-215ENST00000560207 FANCLQ9NW38 375 aa12.9□□□□□ -0.34
RABGGTA-215ENST00000560207 ZDHHC7Q9NXF8 308 aa12.9□□□□□ -0.34
RABGGTA-215ENST00000560207 DDX43Q9NXZ2 648 aaKnown RBP12.9□□□□□ -0.34
RABGGTA-215ENST00000560207 NXF1Q9UBU9 619 aaKnown RBP12.9□□□□□ -0.34
RABGGTA-215ENST00000560207 LIMA1Q9UHB6 759 aaKnown RBP12.9□□□□□ -0.34
RABGGTA-215ENST00000560207 L1RE1Q9UN81 338 aa12.9□□□□□ -0.34
RABGGTA-215ENST00000560207 HCFC2Q9Y5Z7 792 aa12.9□□□□□ -0.34
RABGGTA-215ENST00000560207 MYH10P35580 1976 aa12.9□□□□□ -0.34
RABGGTA-215ENST00000560207 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.89□□□□□ -0.35
RABGGTA-215ENST00000560207 PAPLNO95428 1278 aa12.89□□□□□ -0.35
RABGGTA-215ENST00000560207 CPB1P15086 417 aa12.89□□□□□ -0.35
RABGGTA-215ENST00000560207 TUFMP49411 452 aaKnown RBP12.89□□□□□ -0.35
RABGGTA-215ENST00000560207 ZNF445P59923 1031 aa12.89□□□□□ -0.35
RABGGTA-215ENST00000560207 GCNT1Q02742 428 aa12.89□□□□□ -0.35
RABGGTA-215ENST00000560207 SKIV2LQ15477 1246 aaKnown RBP12.89□□□□□ -0.35
RABGGTA-215ENST00000560207 EXOC3L4Q17RC7 722 aa12.89□□□□□ -0.35
RABGGTA-215ENST00000560207 CBWD6Q4V339 395 aa12.89□□□□□ -0.35
RABGGTA-215ENST00000560207 CBWD3Q5JTY5 395 aa12.89□□□□□ -0.35
RABGGTA-215ENST00000560207 CBWD5Q5RIA9 395 aa12.89□□□□□ -0.35
RABGGTA-215ENST00000560207 CES5AQ6NT32 575 aa12.89□□□□□ -0.35
RABGGTA-215ENST00000560207 RBM23Q86U06 439 aaKnown RBP12.89□□□□□ -0.35
RABGGTA-215ENST00000560207 TCEAL8Q8IYN2 117 aa12.89□□□□□ -0.35
RABGGTA-215ENST00000560207 FUBP3Q96I24 572 aaKnown RBP eCLIP12.89□□□□□ -0.35
RABGGTA-215ENST00000560207 ZCWPW1Q9H0M4 648 aa12.89□□□□□ -0.35
RABGGTA-215ENST00000560207 SFXN1Q9H9B4 322 aa12.89□□□□□ -0.35
RABGGTA-215ENST00000560207 SAMSN1Q9NSI8 373 aaKnown RBP12.89□□□□□ -0.35
RABGGTA-215ENST00000560207 KIAA1257Q9ULG3 409 aa12.89□□□□□ -0.35
RABGGTA-215ENST00000560207 BARX2Q9UMQ3 279 aaPredicted RBP12.89□□□□□ -0.35
RABGGTA-215ENST00000560207 ATP8B3O60423 1300 aa12.88□□□□□ -0.35
RABGGTA-215ENST00000560207 PTPRDP23468 1912 aa12.88□□□□□ -0.35
RABGGTA-215ENST00000560207 SPDYE4A6NLX3 237 aa12.88□□□□□ -0.35
RABGGTA-215ENST00000560207 ZNF18P17022 549 aa12.88□□□□□ -0.35
RABGGTA-215ENST00000560207 ROR1Q01973 937 aa12.88□□□□□ -0.35
RABGGTA-215ENST00000560207 INCA1Q0VD86 236 aa12.88□□□□□ -0.35
RABGGTA-215ENST00000560207 ADGRD2Q7Z7M1 963 aa12.88□□□□□ -0.35
RABGGTA-215ENST00000560207 FMNL3Q8IVF7 1028 aa12.88□□□□□ -0.35
RABGGTA-215ENST00000560207 AOPEPQ8N6M6 819 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms