RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 PAPSS2O95340 614 aaPredicted RBP14.2□□□□□ -0.14
TPM1-220ENST00000559556 FGF19O95750 216 aa14.2□□□□□ -0.14
TPM1-220ENST00000559556 CYP11A1P05108 521 aa14.2□□□□□ -0.14
TPM1-220ENST00000559556 CCNE1P24864 410 aa14.2□□□□□ -0.14
TPM1-220ENST00000559556 GJB2P29033 226 aa14.2□□□□□ -0.14
TPM1-220ENST00000559556 ABCD1P33897 745 aa14.2□□□□□ -0.14
TPM1-220ENST00000559556 ALDH1A3P47895 512 aa14.2□□□□□ -0.14
TPM1-220ENST00000559556 LMNB2Q03252 620 aa14.2□□□□□ -0.14
TPM1-220ENST00000559556 GAS6Q14393 721 aa14.2□□□□□ -0.14
TPM1-220ENST00000559556 C9orf57Q5W0N0 161 aa14.2□□□□□ -0.14
TPM1-220ENST00000559556 LAIR1Q6GTX8 287 aa14.2□□□□□ -0.14
TPM1-220ENST00000559556 CD302Q8IX05 232 aa14.2□□□□□ -0.14
TPM1-220ENST00000559556 YAF2Q8IY57 180 aa14.2□□□□□ -0.14
TPM1-220ENST00000559556 CSGALNACT1Q8TDX6 532 aa14.2□□□□□ -0.14
TPM1-220ENST00000559556 CALML4Q96GE6 196 aa14.2□□□□□ -0.14
TPM1-220ENST00000559556 SENP8Q96LD8 212 aa14.2□□□□□ -0.14
TPM1-220ENST00000559556 FIZ1Q96SL8 496 aa14.2□□□□□ -0.14
TPM1-220ENST00000559556 MSTO1Q9BUK6 570 aa14.2□□□□□ -0.14
TPM1-220ENST00000559556 C8orf33Q9H7E9 229 aaPredicted RBP14.2□□□□□ -0.14
TPM1-220ENST00000559556 DERAQ9Y315 318 aa14.2□□□□□ -0.14
TPM1-220ENST00000559556 SLC38A8A6NNN8 435 aa14.19□□□□□ -0.14
TPM1-220ENST00000559556 PRR5-ARHGAP8B1AHC4 643 aa14.19□□□□□ -0.14
TPM1-220ENST00000559556 H3BQV1 296 aa14.19□□□□□ -0.14
TPM1-220ENST00000559556 PIRO00625 290 aa14.19□□□□□ -0.14
TPM1-220ENST00000559556 TRAK2O60296 914 aa14.19□□□□□ -0.14
TPM1-220ENST00000559556 NFICP08651 508 aa14.19□□□□□ -0.14
TPM1-220ENST00000559556 WEE1P30291 646 aa14.19□□□□□ -0.14
TPM1-220ENST00000559556 UBA7P41226 1012 aa14.19□□□□□ -0.14
TPM1-220ENST00000559556 ARHGAP8P85298 464 aa14.19□□□□□ -0.14
TPM1-220ENST00000559556 GTF2BQ00403 316 aa14.19□□□□□ -0.14
TPM1-220ENST00000559556 SATB1Q01826 763 aa14.19□□□□□ -0.14
TPM1-220ENST00000559556 LRRC32Q14392 662 aa14.19□□□□□ -0.14
TPM1-220ENST00000559556 TMEM132DQ14C87 1099 aa14.19□□□□□ -0.14
TPM1-220ENST00000559556 ARHGAP29Q52LW3 1261 aa14.19□□□□□ -0.14
TPM1-220ENST00000559556 WDR44Q5JSH3 913 aa14.19□□□□□ -0.14
TPM1-220ENST00000559556 DNAJB7Q7Z6W7 309 aaPredicted RBP14.19□□□□□ -0.14
TPM1-220ENST00000559556 ITIH5Q86UX2 942 aa14.19□□□□□ -0.14
TPM1-220ENST00000559556 RALGPS2Q86X27 583 aaPredicted RBP14.19□□□□□ -0.14
TPM1-220ENST00000559556 ARID3BQ8IVW6 561 aaPredicted RBP14.19□□□□□ -0.14
TPM1-220ENST00000559556 SPEM1Q8N4L4 309 aa14.19□□□□□ -0.14
TPM1-220ENST00000559556 MYCT1Q8N699 235 aa14.19□□□□□ -0.14
TPM1-220ENST00000559556 CELF5Q8N6W0 485 aaKnown RBP14.19□□□□□ -0.14
TPM1-220ENST00000559556 ATAD1Q8NBU5 361 aa14.19□□□□□ -0.14
TPM1-220ENST00000559556 OR10T2Q8NGX3 314 aa14.19□□□□□ -0.14
TPM1-220ENST00000559556 TMX3Q96JJ7 454 aa14.19□□□□□ -0.14
TPM1-220ENST00000559556 TMEM209Q96SK2 561 aa14.19□□□□□ -0.14
TPM1-220ENST00000559556 PARD6AQ9NPB6 346 aa14.19□□□□□ -0.14
TPM1-220ENST00000559556 OBP2AQ9NY56 170 aa14.19□□□□□ -0.14
TPM1-220ENST00000559556 GMEB2Q9UKD1 530 aa14.19□□□□□ -0.14
TPM1-220ENST00000559556 RAB23Q9ULC3 237 aa14.19□□□□□ -0.14
TPM1-220ENST00000559556 SLC27A5Q9Y2P5 690 aa14.19□□□□□ -0.14
TPM1-220ENST00000559556 MYBPHLA2RUH7 354 aa14.18□□□□□ -0.14
TPM1-220ENST00000559556 SPECC1L-ADORA2AF8WAN1 911 aa14.18□□□□□ -0.14
TPM1-220ENST00000559556 LRP3O75074 770 aa14.18□□□□□ -0.14
TPM1-220ENST00000559556 SOAT2O75908 522 aa14.18□□□□□ -0.14
TPM1-220ENST00000559556 PRAMEF12O95522 483 aa14.18□□□□□ -0.14
TPM1-220ENST00000559556 PLCG1P19174 1290 aa14.18□□□□□ -0.14
TPM1-220ENST00000559556 GABRR2P28476 465 aa14.18□□□□□ -0.14
TPM1-220ENST00000559556 CTHP32929 405 aa14.18□□□□□ -0.14
TPM1-220ENST00000559556 CXCL12P48061 93 aa14.18□□□□□ -0.14
TPM1-220ENST00000559556 DHX8Q14562 1220 aaKnown RBP14.18□□□□□ -0.14
TPM1-220ENST00000559556 MCM6Q14566 821 aa14.18□□□□□ -0.14
TPM1-220ENST00000559556 ARMCX5Q6P1M9 558 aa14.18□□□□□ -0.14
TPM1-220ENST00000559556 RAD54LQ92698 747 aa14.18□□□□□ -0.14
TPM1-220ENST00000559556 LRRC3BQ96PB8 259 aa14.18□□□□□ -0.14
TPM1-220ENST00000559556 CCSER1Q9C0I3 900 aa14.18□□□□□ -0.14
TPM1-220ENST00000559556 ASB7Q9H672 318 aa14.18□□□□□ -0.14
TPM1-220ENST00000559556 CDV3Q9UKY7 258 aaKnown RBP14.18□□□□□ -0.14
TPM1-220ENST00000559556 USP18Q9UMW8 372 aa14.18□□□□□ -0.14
TPM1-220ENST00000559556 C2CD2Q9Y426 696 aa14.18□□□□□ -0.14
TPM1-220ENST00000559556 PCNX2A6NKB5 2137 aa14.18□□□□□ -0.14
TPM1-220ENST00000559556 ADAMTS9Q9P2N4 1935 aa14.17□□□□□ -0.14
TPM1-220ENST00000559556 ZZEF1O43149 2961 aa14.17□□□□□ -0.14
TPM1-220ENST00000559556 K7ESF4 209 aa14.17□□□□□ -0.14
TPM1-220ENST00000559556 TBCAO75347 108 aaKnown RBP14.17□□□□□ -0.14
TPM1-220ENST00000559556 CD2BP2O95400 341 aaKnown RBP14.17□□□□□ -0.14
TPM1-220ENST00000559556 BMP15O95972 392 aa14.17□□□□□ -0.14
TPM1-220ENST00000559556 ATF6P18850 670 aa14.17□□□□□ -0.14
TPM1-220ENST00000559556 NMT1P30419 496 aaKnown RBP14.17□□□□□ -0.14
TPM1-220ENST00000559556 LONP1P36776 959 aaKnown RBP14.17□□□□□ -0.14
TPM1-220ENST00000559556 SOX9P48436 509 aa14.17□□□□□ -0.14
TPM1-220ENST00000559556 ACOT2P49753 483 aa14.17□□□□□ -0.14
TPM1-220ENST00000559556 KPNA1P52294 538 aaPredicted RBP14.17□□□□□ -0.14
TPM1-220ENST00000559556 ATXN1P54253 815 aaKnown RBP14.17□□□□□ -0.14
TPM1-220ENST00000559556 CCINQ13939 588 aa14.17□□□□□ -0.14
TPM1-220ENST00000559556 KARSQ15046 597 aaKnown RBP14.17□□□□□ -0.14
TPM1-220ENST00000559556 SLC39A12Q504Y0 691 aa14.17□□□□□ -0.14
TPM1-220ENST00000559556 ARHGAP15Q53QZ3 475 aa14.17□□□□□ -0.14
TPM1-220ENST00000559556 DGKKQ5KSL6 1271 aa14.17□□□□□ -0.14
TPM1-220ENST00000559556 GPR158Q5T848 1215 aa14.17□□□□□ -0.14
TPM1-220ENST00000559556 TXNDC11Q6PKC3 985 aa14.17□□□□□ -0.14
TPM1-220ENST00000559556 LARP4BQ92615 738 aaKnown RBP14.17□□□□□ -0.14
TPM1-220ENST00000559556 FAM212AQ96EL1 285 aa14.17□□□□□ -0.14
TPM1-220ENST00000559556 ZCWPW1Q9H0M4 648 aa14.17□□□□□ -0.14
TPM1-220ENST00000559556 ATXN3LQ9H3M9 355 aa14.17□□□□□ -0.14
TPM1-220ENST00000559556 ST6GALNAC4Q9H4F1 302 aa14.17□□□□□ -0.14
TPM1-220ENST00000559556 IL21Q9HBE4 155 aa14.17□□□□□ -0.14
TPM1-220ENST00000559556 DSEQ9UL01 958 aa14.17□□□□□ -0.14
TPM1-220ENST00000559556 STYXL1Q9Y6J8 313 aa14.17□□□□□ -0.14
TPM1-220ENST00000559556 FAM208BQ5VWN6 2430 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms