RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 MMS19Q96T76 1030 aa21.77■■□□□ 1.07
TSPAN3-207ENST00000559494 PI4K2AQ9BTU6 479 aa21.77■■□□□ 1.07
TSPAN3-207ENST00000559494 APOL5Q9BWW9 433 aa21.77■■□□□ 1.07
TSPAN3-207ENST00000559494 PLEKHA4Q9H4M7 779 aa21.77■■□□□ 1.07
TSPAN3-207ENST00000559494 MAN1C1Q9NR34 630 aa21.77■■□□□ 1.07
TSPAN3-207ENST00000559494 NXF1Q9UBU9 619 aaKnown RBP21.77■■□□□ 1.07
TSPAN3-207ENST00000559494 CD207Q9UJ71 328 aa21.77■■□□□ 1.07
TSPAN3-207ENST00000559494 FBXW11Q9UKB1 542 aa21.77■■□□□ 1.07
TSPAN3-207ENST00000559494 TSC2P49815 1807 aa21.76■■□□□ 1.07
TSPAN3-207ENST00000559494 GABRDO14764 452 aa21.76■■□□□ 1.07
TSPAN3-207ENST00000559494 ASS1P00966 412 aaKnown RBP21.76■■□□□ 1.07
TSPAN3-207ENST00000559494 PIK3CAP42336 1068 aa21.76■■□□□ 1.07
TSPAN3-207ENST00000559494 MXI1P50539 228 aa21.76■■□□□ 1.07
TSPAN3-207ENST00000559494 TYRO3Q06418 890 aa21.76■■□□□ 1.07
TSPAN3-207ENST00000559494 STX1AQ16623 288 aa21.76■■□□□ 1.07
TSPAN3-207ENST00000559494 TPD52L1Q16890 204 aaPredicted RBP21.76■■□□□ 1.07
TSPAN3-207ENST00000559494 SPOPLQ6IQ16 392 aa21.76■■□□□ 1.07
TSPAN3-207ENST00000559494 THEM5Q8N1Q8 247 aa21.76■■□□□ 1.07
TSPAN3-207ENST00000559494 KBTBD7Q8WVZ9 684 aa21.76■■□□□ 1.07
TSPAN3-207ENST00000559494 ATXN2LQ8WWM7 1075 aaKnown RBP21.76■■□□□ 1.07
TSPAN3-207ENST00000559494 TAF4BQ92750 862 aa21.76■■□□□ 1.07
TSPAN3-207ENST00000559494 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.76■■□□□ 1.076e-6■■■■■ 48.1
TSPAN3-207ENST00000559494 DZANK1Q9NVP4 752 aa21.76■■□□□ 1.07
TSPAN3-207ENST00000559494 A0A0C4DFX4 3053 aa21.75■■□□□ 1.07
TSPAN3-207ENST00000559494 FAM163BP0C2L3 166 aa21.75■■□□□ 1.07
TSPAN3-207ENST00000559494 CCDC192P0DO97 292 aa21.75■■□□□ 1.07
TSPAN3-207ENST00000559494 KCNQ1P51787 676 aa21.75■■□□□ 1.07
TSPAN3-207ENST00000559494 TNNC1P63316 161 aa21.75■■□□□ 1.07
TSPAN3-207ENST00000559494 MRPS5P82675 430 aaKnown RBP21.75■■□□□ 1.07
TSPAN3-207ENST00000559494 ZNF667Q5HYK9 610 aa21.75■■□□□ 1.07
TSPAN3-207ENST00000559494 RNF19BQ6ZMZ0 732 aa21.75■■□□□ 1.07
TSPAN3-207ENST00000559494 LRRTM3Q86VH5 581 aa21.75■■□□□ 1.07
TSPAN3-207ENST00000559494 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.75■■□□□ 1.07
TSPAN3-207ENST00000559494 ADGRF2Q8IZF7 708 aa21.75■■□□□ 1.07
TSPAN3-207ENST00000559494 SMRP1Q8NCR6 262 aa21.75■■□□□ 1.07
TSPAN3-207ENST00000559494 SPATA18Q8TC71 538 aa21.75■■□□□ 1.07
TSPAN3-207ENST00000559494 ENOX1Q8TC92 643 aaKnown RBP21.75■■□□□ 1.07
TSPAN3-207ENST00000559494 CNOT6LQ96LI5 555 aaKnown RBP21.75■■□□□ 1.07
TSPAN3-207ENST00000559494 MRPL45Q9BRJ2 306 aaKnown RBP21.75■■□□□ 1.07
TSPAN3-207ENST00000559494 THAP9Q9H5L6 903 aa21.75■■□□□ 1.07
TSPAN3-207ENST00000559494 APOBEC3GQ9HC16 384 aaKnown RBP21.75■■□□□ 1.07
TSPAN3-207ENST00000559494 DDX43Q9NXZ2 648 aaKnown RBP21.75■■□□□ 1.07
TSPAN3-207ENST00000559494 COQ4Q9Y3A0 265 aa21.75■■□□□ 1.07
TSPAN3-207ENST00000559494 GRXCR2A6NFK2 248 aa21.74■■□□□ 1.07
TSPAN3-207ENST00000559494 HCRTO43612 131 aa21.74■■□□□ 1.07
TSPAN3-207ENST00000559494 RFPL2O75678 378 aa21.74■■□□□ 1.07
TSPAN3-207ENST00000559494 SEC24AO95486 1093 aa21.74■■□□□ 1.07
TSPAN3-207ENST00000559494 VNN2O95498 520 aa21.74■■□□□ 1.07
TSPAN3-207ENST00000559494 CPB1P15086 417 aa21.74■■□□□ 1.07
TSPAN3-207ENST00000559494 ATF2P15336 505 aa21.74■■□□□ 1.07
TSPAN3-207ENST00000559494 WARSP23381 471 aaKnown RBP21.74■■□□□ 1.07
TSPAN3-207ENST00000559494 LMO2P25791 158 aa21.74■■□□□ 1.07
TSPAN3-207ENST00000559494 LHX1P48742 406 aa21.74■■□□□ 1.07
TSPAN3-207ENST00000559494 FMO5P49326 533 aa21.74■■□□□ 1.07
TSPAN3-207ENST00000559494 GPR17Q13304 367 aa21.74■■□□□ 1.07
TSPAN3-207ENST00000559494 NFKBIBQ15653 356 aa21.74■■□□□ 1.07
TSPAN3-207ENST00000559494 SKOR2Q2VWA4 1001 aaPredicted RBP21.74■■□□□ 1.07
TSPAN3-207ENST00000559494 RARS2Q5T160 578 aaKnown RBP21.74■■□□□ 1.07
TSPAN3-207ENST00000559494 TPGS2Q68CL5 300 aa21.74■■□□□ 1.07
TSPAN3-207ENST00000559494 CREBRFQ8IUR6 639 aa21.74■■□□□ 1.07
TSPAN3-207ENST00000559494 FBXL13Q8NEE6 735 aa21.74■■□□□ 1.07
TSPAN3-207ENST00000559494 ASB2Q96Q27 587 aa21.74■■□□□ 1.07
TSPAN3-207ENST00000559494 ZCWPW1Q9H0M4 648 aa21.74■■□□□ 1.07
TSPAN3-207ENST00000559494 DNAJC25Q9H1X3 360 aa21.74■■□□□ 1.07
TSPAN3-207ENST00000559494 RAB20Q9NX57 234 aa21.74■■□□□ 1.07
TSPAN3-207ENST00000559494 DPP7Q9UHL4 492 aa21.74■■□□□ 1.07
TSPAN3-207ENST00000559494 DOCK6Q96HP0 2047 aa21.73■■□□□ 1.07
TSPAN3-207ENST00000559494 MBTPS2O43462 519 aa21.73■■□□□ 1.07
TSPAN3-207ENST00000559494 TACC1O75410 805 aa21.73■■□□□ 1.07
TSPAN3-207ENST00000559494 ACAT1P24752 427 aaKnown RBP21.73■■□□□ 1.07
TSPAN3-207ENST00000559494 CDH8P55286 799 aa21.73■■□□□ 1.07
TSPAN3-207ENST00000559494 KCNH2Q12809 1159 aa21.73■■□□□ 1.07
TSPAN3-207ENST00000559494 AAK1Q2M2I8 961 aa21.73■■□□□ 1.07
TSPAN3-207ENST00000559494 TMC5Q6UXY8 1006 aa21.73■■□□□ 1.07
TSPAN3-207ENST00000559494 ACBD6Q9BR61 282 aa21.73■■□□□ 1.07
TSPAN3-207ENST00000559494 SDCBP2Q9H190 292 aa21.73■■□□□ 1.07
TSPAN3-207ENST00000559494 SMYD3Q9H7B4 428 aa21.73■■□□□ 1.07
TSPAN3-207ENST00000559494 SFXN1Q9H9B4 322 aa21.73■■□□□ 1.07
TSPAN3-207ENST00000559494 SAMSN1Q9NSI8 373 aaKnown RBP21.73■■□□□ 1.07
TSPAN3-207ENST00000559494 AFF4Q9UHB7 1163 aaKnown RBP21.73■■□□□ 1.07
TSPAN3-207ENST00000559494 NME7Q9Y5B8 376 aa21.73■■□□□ 1.07
TSPAN3-207ENST00000559494 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.73■■□□□ 1.07
TSPAN3-207ENST00000559494 C5orf42Q9H799 3197 aa21.72■■□□□ 1.07
TSPAN3-207ENST00000559494 CCDC195A0A1B0GUA6 201 aa21.72■■□□□ 1.07
TSPAN3-207ENST00000559494 PMM2O15305 246 aa21.72■■□□□ 1.07
TSPAN3-207ENST00000559494 ZMYND10O75800 440 aa21.72■■□□□ 1.07
TSPAN3-207ENST00000559494 LETM1O95202 739 aaPredicted RBP21.72■■□□□ 1.07
TSPAN3-207ENST00000559494 GNL1P36915 607 aaPredicted RBP21.72■■□□□ 1.07
TSPAN3-207ENST00000559494 CDR1P51861 262 aa21.72■■□□□ 1.07
TSPAN3-207ENST00000559494 MYL7Q01449 175 aa21.72■■□□□ 1.07
TSPAN3-207ENST00000559494 ADCY1Q08828 1119 aa21.72■■□□□ 1.07
TSPAN3-207ENST00000559494 SMAD4Q13485 552 aaKnown RBP21.72■■□□□ 1.07
TSPAN3-207ENST00000559494 UVSSAQ2YD98 709 aa21.72■■□□□ 1.07
TSPAN3-207ENST00000559494 HSP90AA4PQ58FG1 418 aa21.72■■□□□ 1.07
TSPAN3-207ENST00000559494 PTCRAQ6ISU1 281 aaPredicted RBP21.72■■□□□ 1.07
TSPAN3-207ENST00000559494 TCEAL8Q8IYN2 117 aa21.72■■□□□ 1.07
TSPAN3-207ENST00000559494 CMASQ8NFW8 434 aaPredicted RBP21.72■■□□□ 1.07
TSPAN3-207ENST00000559494 TATDN2Q93075 761 aa21.72■■□□□ 1.07
TSPAN3-207ENST00000559494 PGLYRP2Q96PD5 576 aa21.72■■□□□ 1.07
TSPAN3-207ENST00000559494 FUCA2Q9BTY2 467 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms