RNA–Protein interactions for RNA: ENST00000559043.1

CDC42BPB-204, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 5

Gene CDC42BPB, Length 1,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-204ENST00000559043 ZACNQ401N2 412 aa16.97■□□□□ 0.31
CDC42BPB-204ENST00000559043 PAN2Q504Q3 1202 aaKnown RBP16.97■□□□□ 0.31
CDC42BPB-204ENST00000559043 MMGT1Q8N4V1 131 aa16.97■□□□□ 0.31
CDC42BPB-204ENST00000559043 COG1Q8WTW3 980 aa16.97■□□□□ 0.31
CDC42BPB-204ENST00000559043 SEMA4DQ92854 862 aa16.97■□□□□ 0.31
CDC42BPB-204ENST00000559043 SPAG5Q96R06 1193 aa16.97■□□□□ 0.31
CDC42BPB-204ENST00000559043 TLR10Q9BXR5 811 aa16.97■□□□□ 0.31
CDC42BPB-204ENST00000559043 GCNT4Q9P109 453 aa16.97■□□□□ 0.31
CDC42BPB-204ENST00000559043 SLC4A7Q9Y6M7 1214 aa16.97■□□□□ 0.31
CDC42BPB-204ENST00000559043 ATP8B3O60423 1300 aa16.97■□□□□ 0.31
CDC42BPB-204ENST00000559043 TBKBP1A7MCY6 615 aa16.96■□□□□ 0.31
CDC42BPB-204ENST00000559043 GJB5O95377 273 aa16.96■□□□□ 0.31
CDC42BPB-204ENST00000559043 THP07101 528 aa16.96■□□□□ 0.31
CDC42BPB-204ENST00000559043 ZNF571Q7Z3V5 609 aaPredicted RBP16.96■□□□□ 0.31
CDC42BPB-204ENST00000559043 UBE2OQ9C0C9 1292 aaKnown RBP16.96■□□□□ 0.31
CDC42BPB-204ENST00000559043 DPP3Q9NY33 737 aa16.96■□□□□ 0.31
CDC42BPB-204ENST00000559043 DNAJB4Q9UDY4 337 aa16.96■□□□□ 0.31
CDC42BPB-204ENST00000559043 NENFQ9UMX5 172 aa16.96■□□□□ 0.31
CDC42BPB-204ENST00000559043 DERAQ9Y315 318 aa16.96■□□□□ 0.31
CDC42BPB-204ENST00000559043 PCDHGC5Q9Y5F6 944 aa16.96■□□□□ 0.31
CDC42BPB-204ENST00000559043 BUB1O43683 1085 aa16.95■□□□□ 0.3
CDC42BPB-204ENST00000559043 LMO3Q8TAP4 145 aa16.95■□□□□ 0.3
CDC42BPB-204ENST00000559043 TAS1R2Q8TE23 839 aa16.95■□□□□ 0.3
CDC42BPB-204ENST00000559043 RPS6KC1Q96S38 1066 aa16.95■□□□□ 0.3
CDC42BPB-204ENST00000559043 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.95■□□□□ 0.3
CDC42BPB-204ENST00000559043 TMEM8AQ9HCN3 771 aa16.95■□□□□ 0.3
CDC42BPB-204ENST00000559043 F8W810 466 aa16.95■□□□□ 0.3
CDC42BPB-204ENST00000559043 ATP2A2P16615 1042 aaKnown RBP16.95■□□□□ 0.3
CDC42BPB-204ENST00000559043 GTF2H1P32780 548 aa16.95■□□□□ 0.3
CDC42BPB-204ENST00000559043 DSC1Q08554 894 aa16.95■□□□□ 0.3
CDC42BPB-204ENST00000559043 HERC6Q8IVU3 1022 aa16.95■□□□□ 0.3
CDC42BPB-204ENST00000559043 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.95■□□□□ 0.36e-7■■■■■ 181.1
CDC42BPB-204ENST00000559043 AJAP1Q9UKB5 411 aaPredicted RBP16.95■□□□□ 0.3
CDC42BPB-204ENST00000559043 TDRD15B5MCY1 1934 aaKnown RBP16.95■□□□□ 0.3
CDC42BPB-204ENST00000559043 RABGGTBP53611 331 aa16.94■□□□□ 0.3
CDC42BPB-204ENST00000559043 HTRA4P83105 476 aaPredicted RBP16.94■□□□□ 0.3
CDC42BPB-204ENST00000559043 KRT39Q6A163 491 aa16.94■□□□□ 0.3
CDC42BPB-204ENST00000559043 ABI1Q8IZP0 508 aa16.94■□□□□ 0.3
CDC42BPB-204ENST00000559043 SPATA4Q8NEY3 305 aa16.94■□□□□ 0.3
CDC42BPB-204ENST00000559043 NRDE2Q9H7Z3 1164 aa16.94■□□□□ 0.3
CDC42BPB-204ENST00000559043 UBQLN1Q9UMX0 589 aaKnown RBP16.94■□□□□ 0.3
CDC42BPB-204ENST00000559043 COQ4Q9Y3A0 265 aa16.94■□□□□ 0.3
CDC42BPB-204ENST00000559043 CASTOR2A6NHX0 329 aa16.93■□□□□ 0.3
CDC42BPB-204ENST00000559043 PALMO75781 387 aa16.93■□□□□ 0.3
CDC42BPB-204ENST00000559043 ITGB3P05106 788 aa16.93■□□□□ 0.3
CDC42BPB-204ENST00000559043 TMEM191BP0C7N4 346 aa16.93■□□□□ 0.3
CDC42BPB-204ENST00000559043 OAS2P29728 719 aaKnown RBP16.93■□□□□ 0.3
CDC42BPB-204ENST00000559043 MXI1P50539 228 aa16.93■□□□□ 0.3
CDC42BPB-204ENST00000559043 C2orf54Q08AI8 447 aa16.93■□□□□ 0.3
CDC42BPB-204ENST00000559043 GRIK3Q13003 919 aa16.93■□□□□ 0.3
CDC42BPB-204ENST00000559043 CASP8Q14790 479 aa16.93■□□□□ 0.3
CDC42BPB-204ENST00000559043 CD300LGQ6UXG3 332 aa16.93■□□□□ 0.3
CDC42BPB-204ENST00000559043 NT5DC4Q86YG4 428 aa16.93■□□□□ 0.3
CDC42BPB-204ENST00000559043 COLGALT2Q8IYK4 626 aa16.93■□□□□ 0.3
CDC42BPB-204ENST00000559043 PHOSPHO2Q8TCD6 241 aa16.93■□□□□ 0.3
CDC42BPB-204ENST00000559043 RUBCNQ92622 972 aa16.93■□□□□ 0.3
CDC42BPB-204ENST00000559043 RNPC3Q96LT9 517 aaKnown RBP16.93■□□□□ 0.3
CDC42BPB-204ENST00000559043 PI4K2AQ9BTU6 479 aa16.93■□□□□ 0.3
CDC42BPB-204ENST00000559043 PACSIN1Q9BY11 444 aa16.93■□□□□ 0.3
CDC42BPB-204ENST00000559043 CWH43Q9H720 699 aa16.93■□□□□ 0.3
CDC42BPB-204ENST00000559043 RNF14Q9UBS8 474 aa16.93■□□□□ 0.3
CDC42BPB-204ENST00000559043 NAGPAQ9UK23 515 aa16.93■□□□□ 0.3
CDC42BPB-204ENST00000559043 DAAM1Q9Y4D1 1078 aa16.93■□□□□ 0.3
CDC42BPB-204ENST00000559043 SCN1AP35498 2009 aa16.93■□□□□ 0.3
CDC42BPB-204ENST00000559043 LCHNA4D1U4 455 aa16.93■□□□□ 0.3
CDC42BPB-204ENST00000559043 PMM2O15305 246 aa16.93■□□□□ 0.3
CDC42BPB-204ENST00000559043 HOXA2O43364 376 aa16.93■□□□□ 0.3
CDC42BPB-204ENST00000559043 NCK2O43639 380 aa16.93■□□□□ 0.3
CDC42BPB-204ENST00000559043 HLA-DRAP01903 254 aa16.93■□□□□ 0.3
CDC42BPB-204ENST00000559043 MYOGP15173 224 aa16.93■□□□□ 0.3
CDC42BPB-204ENST00000559043 PBX3P40426 434 aa16.93■□□□□ 0.3
CDC42BPB-204ENST00000559043 CLCNKBP51801 687 aa16.93■□□□□ 0.3
CDC42BPB-204ENST00000559043 MYL6P60660 151 aa16.93■□□□□ 0.3
CDC42BPB-204ENST00000559043 MLLT1Q03111 559 aaPredicted RBP16.93■□□□□ 0.3
CDC42BPB-204ENST00000559043 BIRC3Q13489 604 aa16.93■□□□□ 0.3
CDC42BPB-204ENST00000559043 MAP9Q49MG5 647 aa16.93■□□□□ 0.3
CDC42BPB-204ENST00000559043 EPC2Q52LR7 807 aa16.93■□□□□ 0.3
CDC42BPB-204ENST00000559043 C9orf57Q5W0N0 161 aa16.93■□□□□ 0.3
CDC42BPB-204ENST00000559043 USP37Q86T82 979 aa16.93■□□□□ 0.3
CDC42BPB-204ENST00000559043 C3orf58Q8NDZ4 430 aa16.93■□□□□ 0.3
CDC42BPB-204ENST00000559043 ANKRD36BP1Q96IX9 119 aa16.93■□□□□ 0.3
CDC42BPB-204ENST00000559043 TSPAN18Q96SJ8 248 aa16.93■□□□□ 0.3
CDC42BPB-204ENST00000559043 SLC9A7Q96T83 725 aa16.93■□□□□ 0.3
CDC42BPB-204ENST00000559043 XYLT2Q9H1B5 865 aa16.93■□□□□ 0.3
CDC42BPB-204ENST00000559043 PRO3102Q9H379 93 aa16.93■□□□□ 0.3
CDC42BPB-204ENST00000559043 KANSL3Q9P2N6 904 aa16.93■□□□□ 0.3
CDC42BPB-204ENST00000559043 PIRO00625 290 aa16.92■□□□□ 0.3
CDC42BPB-204ENST00000559043 ARHGEF15O94989 841 aa16.92■□□□□ 0.3
CDC42BPB-204ENST00000559043 TNNC2P02585 160 aa16.92■□□□□ 0.3
CDC42BPB-204ENST00000559043 LINC00271P0C7V0 271 aa16.92■□□□□ 0.3
CDC42BPB-204ENST00000559043 FERP16591 822 aa16.92■□□□□ 0.3
CDC42BPB-204ENST00000559043 CYP3A5P20815 502 aa16.92■□□□□ 0.3
CDC42BPB-204ENST00000559043 LRPAP1P30533 357 aa16.92■□□□□ 0.3
CDC42BPB-204ENST00000559043 POLR2BP30876 1174 aaKnown RBP16.92■□□□□ 0.3
CDC42BPB-204ENST00000559043 AP3M2P53677 418 aa16.92■□□□□ 0.3
CDC42BPB-204ENST00000559043 NAP1L1P55209 391 aaKnown RBP16.92■□□□□ 0.3
CDC42BPB-204ENST00000559043 MYL7Q01449 175 aa16.92■□□□□ 0.3
CDC42BPB-204ENST00000559043 TUSC3Q13454 348 aa16.92■□□□□ 0.3
CDC42BPB-204ENST00000559043 UPP1Q16831 310 aa16.92■□□□□ 0.3
CDC42BPB-204ENST00000559043 MEI1Q5TIA1 1274 aa16.92■□□□□ 0.3
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