RNA–Protein interactions for RNA: ENST00000559037.1

CASC4-207, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 680 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-207ENST00000559037 HDAC1Q13547 482 aaPredicted RBP5.9□□□□□ -1.46
CASC4-207ENST00000559037 KIF22Q14807 665 aa5.9□□□□□ -1.46
CASC4-207ENST00000559037 SART3Q15020 963 aaKnown RBP5.9□□□□□ -1.46
CASC4-207ENST00000559037 SHROOM1Q2M3G4 852 aaPredicted RBP5.9□□□□□ -1.46
CASC4-207ENST00000559037 TREML2Q5T2D2 321 aa5.9□□□□□ -1.46
CASC4-207ENST00000559037 GPR158Q5T848 1215 aa5.9□□□□□ -1.46
CASC4-207ENST00000559037 TRIM68Q6AZZ1 485 aa5.9□□□□□ -1.46
CASC4-207ENST00000559037 GADL1Q6ZQY3 521 aa5.9□□□□□ -1.46
CASC4-207ENST00000559037 EDC3Q96F86 508 aaKnown RBP5.9□□□□□ -1.46
CASC4-207ENST00000559037 ZNF333Q96JL9 665 aa5.9□□□□□ -1.46
CASC4-207ENST00000559037 PARK7Q99497 189 aaKnown RBP5.9□□□□□ -1.46
CASC4-207ENST00000559037 ANP32EQ9BTT0 268 aa5.9□□□□□ -1.46
CASC4-207ENST00000559037 SSBP3Q9BWW4 388 aaPredicted RBP5.9□□□□□ -1.46
CASC4-207ENST00000559037 KRTAP4-11Q9BYQ6 195 aa5.9□□□□□ -1.46
CASC4-207ENST00000559037 LRRCC1Q9C099 1032 aa5.9□□□□□ -1.46
CASC4-207ENST00000559037 BOLA2Q9H3K6 86 aa5.9□□□□□ -1.46
CASC4-207ENST00000559037 PAG1Q9NWQ8 432 aa5.9□□□□□ -1.46
CASC4-207ENST00000559037 PPP4R1LQ9P1A2 415 aa5.9□□□□□ -1.46
CASC4-207ENST00000559037 USP36Q9P275 1121 aaKnown RBP5.9□□□□□ -1.46
CASC4-207ENST00000559037 SAP30BPQ9UHR5 308 aaKnown RBP5.9□□□□□ -1.46
CASC4-207ENST00000559037 SERPINB13Q9UIV8 391 aa5.9□□□□□ -1.46
CASC4-207ENST00000559037 AGTPBP1Q9UPW5 1226 aa5.9□□□□□ -1.46
CASC4-207ENST00000559037 MAPRE3Q9UPY8 281 aa5.9□□□□□ -1.46
CASC4-207ENST00000559037 ZNF532Q9HCE3 1301 aa5.9□□□□□ -1.47
CASC4-207ENST00000559037 PMS2P1A4D2B8 440 aa5.89□□□□□ -1.47
CASC4-207ENST00000559037 CLSTN1O94985 981 aa5.89□□□□□ -1.47
CASC4-207ENST00000559037 ADRB1P08588 477 aa5.89□□□□□ -1.47
CASC4-207ENST00000559037 EN2P19622 333 aaPredicted RBP5.89□□□□□ -1.47
CASC4-207ENST00000559037 CD40P25942 277 aa5.89□□□□□ -1.47
CASC4-207ENST00000559037 SHMT1P34896 483 aa5.89□□□□□ -1.47
CASC4-207ENST00000559037 ADD2P35612 726 aa5.89□□□□□ -1.47
CASC4-207ENST00000559037 MAGEA10P43363 369 aaPredicted RBP5.89□□□□□ -1.47
CASC4-207ENST00000559037 GCLCP48506 637 aaPredicted RBP5.89□□□□□ -1.47
CASC4-207ENST00000559037 SCNN1BP51168 640 aa5.89□□□□□ -1.47
CASC4-207ENST00000559037 HMGCS2P54868 508 aa5.89□□□□□ -1.47
CASC4-207ENST00000559037 BCAR1P56945 870 aa5.89□□□□□ -1.47
CASC4-207ENST00000559037 RAC3P60763 192 aa5.89□□□□□ -1.47
CASC4-207ENST00000559037 CD83Q01151 205 aa5.89□□□□□ -1.47
CASC4-207ENST00000559037 GABPAQ06546 454 aa5.89□□□□□ -1.47
CASC4-207ENST00000559037 LRRC32Q14392 662 aa5.89□□□□□ -1.47
CASC4-207ENST00000559037 UBE3CQ15386 1083 aa5.89□□□□□ -1.47
CASC4-207ENST00000559037 CREB3L3Q68CJ9 461 aa5.89□□□□□ -1.47
CASC4-207ENST00000559037 SLFN12LQ6IEE8 588 aa5.89□□□□□ -1.47
CASC4-207ENST00000559037 CNNM4Q6P4Q7 775 aa5.89□□□□□ -1.47
CASC4-207ENST00000559037 LRSAM1Q6UWE0 723 aa5.89□□□□□ -1.47
CASC4-207ENST00000559037 PHYKPLQ8IUZ5 450 aa5.89□□□□□ -1.47
CASC4-207ENST00000559037 C7orf31Q8N865 590 aa5.89□□□□□ -1.47
CASC4-207ENST00000559037 OR2W6PQ8NHA6 318 aa5.89□□□□□ -1.47
CASC4-207ENST00000559037 P2RX7Q99572 595 aaKnown RBP5.89□□□□□ -1.47
CASC4-207ENST00000559037 TARS2Q9BW92 718 aaKnown RBP5.89□□□□□ -1.47
CASC4-207ENST00000559037 MEGF9Q9H1U4 602 aa5.89□□□□□ -1.47
CASC4-207ENST00000559037 AS3MTQ9HBK9 375 aa5.89□□□□□ -1.47
CASC4-207ENST00000559037 ECHDC1Q9NTX5 307 aa5.89□□□□□ -1.47
CASC4-207ENST00000559037 OXSMQ9NWU1 459 aa5.89□□□□□ -1.47
CASC4-207ENST00000559037 SMPD4Q9NXE4 827 aa5.89□□□□□ -1.47
CASC4-207ENST00000559037 GJD2Q9UKL4 321 aa5.89□□□□□ -1.47
CASC4-207ENST00000559037 ZBTB21Q9ULJ3 1066 aa5.89□□□□□ -1.47
CASC4-207ENST00000559037 FRMPD3Q5JV73 1810 aa5.89□□□□□ -1.47
CASC4-207ENST00000559037 BAZ2BQ9UIF8 2168 aaKnown RBP5.89□□□□□ -1.47
CASC4-207ENST00000559037 PRKAB2O43741 272 aa5.88□□□□□ -1.47
CASC4-207ENST00000559037 GH2P01242 217 aa5.88□□□□□ -1.47
CASC4-207ENST00000559037 HLA-DOAP06340 250 aa5.88□□□□□ -1.47
CASC4-207ENST00000559037 ZNF888P0CJ79 500 aaPredicted RBP5.88□□□□□ -1.47
CASC4-207ENST00000559037 ATP2A2P16615 1042 aaKnown RBP5.88□□□□□ -1.47
CASC4-207ENST00000559037 GUCY1A2P33402 732 aa5.88□□□□□ -1.47
CASC4-207ENST00000559037 ADCY8P40145 1251 aa5.88□□□□□ -1.47
CASC4-207ENST00000559037 KCNQ1P51787 676 aa5.88□□□□□ -1.47
CASC4-207ENST00000559037 SLC6A3Q01959 620 aa5.88□□□□□ -1.47
CASC4-207ENST00000559037 FAM110CQ1W6H9 321 aa5.88□□□□□ -1.47
CASC4-207ENST00000559037 SLC4A8Q2Y0W8 1093 aa5.88□□□□□ -1.47
CASC4-207ENST00000559037 SLC9C1Q4G0N8 1177 aa5.88□□□□□ -1.47
CASC4-207ENST00000559037 C12orf60Q5U649 245 aa5.88□□□□□ -1.47
CASC4-207ENST00000559037 AGBL4Q5VU57 503 aa5.88□□□□□ -1.47
CASC4-207ENST00000559037 TIGD7Q6NT04 549 aaPredicted RBP5.88□□□□□ -1.47
CASC4-207ENST00000559037 GPR155Q7Z3F1 870 aa5.88□□□□□ -1.47
CASC4-207ENST00000559037 DHX37Q8IY37 1157 aaKnown RBP5.88□□□□□ -1.47
CASC4-207ENST00000559037 LCORLQ8N3X6 602 aa5.88□□□□□ -1.47
CASC4-207ENST00000559037 ANKRD13CQ8N6S4 541 aa5.88□□□□□ -1.47
CASC4-207ENST00000559037 SDR42E1Q8WUS8 393 aa5.88□□□□□ -1.47
CASC4-207ENST00000559037 ERCC4Q92889 916 aaPredicted RBP5.88□□□□□ -1.47
CASC4-207ENST00000559037 GCC1Q96CN9 775 aa5.88□□□□□ -1.47
CASC4-207ENST00000559037 LMF1Q96S06 567 aa5.88□□□□□ -1.47
CASC4-207ENST00000559037 ELF4Q99607 663 aaPredicted RBP5.88□□□□□ -1.47
CASC4-207ENST00000559037 CRNKL1Q9BZJ0 848 aaKnown RBP5.88□□□□□ -1.47
CASC4-207ENST00000559037 OR10A2Q9H208 303 aa5.88□□□□□ -1.47
CASC4-207ENST00000559037 SEMA4AQ9H3S1 761 aa5.88□□□□□ -1.47
CASC4-207ENST00000559037 ARMT1Q9H993 441 aa5.88□□□□□ -1.47
CASC4-207ENST00000559037 ATP8A2Q9NTI2 1148 aa5.88□□□□□ -1.47
CASC4-207ENST00000559037 KCMF1Q9P0J7 381 aa5.88□□□□□ -1.47
CASC4-207ENST00000559037 MORF4L1Q9UBU8 362 aa5.88□□□□□ -1.47
CASC4-207ENST00000559037 GABRQQ9UN88 632 aa5.88□□□□□ -1.47
CASC4-207ENST00000559037 GSG1L2A8MUP6 293 aa5.87□□□□□ -1.47
CASC4-207ENST00000559037 SMIM22K7EJ46 135 aa5.87□□□□□ -1.47
CASC4-207ENST00000559037 ARHGAP6O43182 974 aa5.87□□□□□ -1.47
CASC4-207ENST00000559037 MBD4O95243 580 aa5.87□□□□□ -1.47
CASC4-207ENST00000559037 LSSP48449 732 aa5.87□□□□□ -1.47
CASC4-207ENST00000559037 FLT3LGP49771 235 aa5.87□□□□□ -1.47
CASC4-207ENST00000559037 KPNA1P52294 538 aaPredicted RBP5.87□□□□□ -1.47
CASC4-207ENST00000559037 PHC1P78364 1004 aa5.87□□□□□ -1.47
CASC4-207ENST00000559037 PRKCZQ05513 592 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms