RNA–Protein interactions for RNA: ENST00000558953.1

MARK3-216, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 5

Gene MARK3, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-216ENST00000558953 PDGFBP01127 241 aaPredicted RBP6.73□□□□□ -1.33
MARK3-216ENST00000558953 SPATA31D3P0C874 917 aa6.73□□□□□ -1.33
MARK3-216ENST00000558953 GBP2P32456 591 aaPredicted RBP6.73□□□□□ -1.33
MARK3-216ENST00000558953 MRE11P49959 708 aa6.73□□□□□ -1.33
MARK3-216ENST00000558953 SMTNP53814 917 aa6.73□□□□□ -1.33
MARK3-216ENST00000558953 TCF15Q12870 199 aa6.73□□□□□ -1.33
MARK3-216ENST00000558953 DMP1Q13316 513 aaPredicted RBP6.73□□□□□ -1.33
MARK3-216ENST00000558953 TDGQ13569 410 aa6.73□□□□□ -1.33
MARK3-216ENST00000558953 NAB2Q15742 525 aa6.73□□□□□ -1.33
MARK3-216ENST00000558953 NT5DC1Q5TFE4 455 aa6.73□□□□□ -1.33
MARK3-216ENST00000558953 ATF7IP2Q5U623 682 aa6.73□□□□□ -1.33
MARK3-216ENST00000558953 FAM171A1Q5VUB5 890 aa6.73□□□□□ -1.33
MARK3-216ENST00000558953 EEF1DP3Q658K8 133 aa6.73□□□□□ -1.33
MARK3-216ENST00000558953 PDXDC1Q6P996 788 aa6.73□□□□□ -1.33
MARK3-216ENST00000558953 LILRA6Q6PI73 481 aa6.73□□□□□ -1.33
MARK3-216ENST00000558953 SPATA31D4Q6ZUB0 917 aa6.73□□□□□ -1.33
MARK3-216ENST00000558953 CEP57Q86XR8 500 aa6.73□□□□□ -1.33
MARK3-216ENST00000558953 FMR1NBQ8N0W7 255 aaPredicted RBP6.73□□□□□ -1.33
MARK3-216ENST00000558953 TPCN2Q8NHX9 752 aa6.73□□□□□ -1.33
MARK3-216ENST00000558953 FEZF2Q8TBJ5 459 aa6.73□□□□□ -1.33
MARK3-216ENST00000558953 PIK3R5Q8WYR1 880 aa6.73□□□□□ -1.33
MARK3-216ENST00000558953 SMG7Q92540 1137 aaKnown RBP6.73□□□□□ -1.33
MARK3-216ENST00000558953 RABGGTAQ92696 567 aa6.73□□□□□ -1.33
MARK3-216ENST00000558953 DRC1Q96MC2 740 aa6.73□□□□□ -1.33
MARK3-216ENST00000558953 PAAF1Q9BRP4 392 aa6.73□□□□□ -1.33
MARK3-216ENST00000558953 TTPALQ9BTX7 342 aa6.73□□□□□ -1.33
MARK3-216ENST00000558953 KIFC3Q9BVG8 833 aa6.73□□□□□ -1.33
MARK3-216ENST00000558953 MRPL4Q9BYD3 311 aaKnown RBP6.73□□□□□ -1.33
MARK3-216ENST00000558953 KRTAP4-11Q9BYQ6 195 aa6.73□□□□□ -1.33
MARK3-216ENST00000558953 NT5C3AQ9H0P0 336 aa6.73□□□□□ -1.33
MARK3-216ENST00000558953 C17orf75Q9HAS0 396 aa6.73□□□□□ -1.33
MARK3-216ENST00000558953 KCNK12Q9HB15 430 aa6.73□□□□□ -1.33
MARK3-216ENST00000558953 POLD4Q9HCU8 107 aa6.73□□□□□ -1.33
MARK3-216ENST00000558953 ZDHHC7Q9NXF8 308 aa6.73□□□□□ -1.33
MARK3-216ENST00000558953 KCNG1Q9UIX4 513 aa6.73□□□□□ -1.33
MARK3-216ENST00000558953 TNFSF13BQ9Y275 285 aa6.73□□□□□ -1.33
MARK3-216ENST00000558953 USP20Q9Y2K6 914 aa6.73□□□□□ -1.33
MARK3-216ENST00000558953 GDAQ9Y2T3 454 aa6.73□□□□□ -1.33
MARK3-216ENST00000558953 CLUHO75153 1309 aa6.73□□□□□ -1.33
MARK3-216ENST00000558953 PP2D1A8MPX8 630 aa6.72□□□□□ -1.33
MARK3-216ENST00000558953 H3BQV1 296 aa6.72□□□□□ -1.33
MARK3-216ENST00000558953 TMEM189-UBE2V1I3L0A0 370 aa6.72□□□□□ -1.33
MARK3-216ENST00000558953 TRAPPC3O43617 180 aa6.72□□□□□ -1.33
MARK3-216ENST00000558953 HIP1RO75146 1068 aa6.72□□□□□ -1.33
MARK3-216ENST00000558953 EDN1P05305 212 aa6.72□□□□□ -1.33
MARK3-216ENST00000558953 HNRNPA1P09651 372 aaKnown RBP eCLIP6.72□□□□□ -1.33
MARK3-216ENST00000558953 MYBP10242 640 aa6.72□□□□□ -1.33
MARK3-216ENST00000558953 PDIA4P13667 645 aaKnown RBP6.72□□□□□ -1.33
MARK3-216ENST00000558953 RPL17P18621 184 aaKnown RBP6.72□□□□□ -1.33
MARK3-216ENST00000558953 FSTP19883 344 aa6.72□□□□□ -1.33
MARK3-216ENST00000558953 NPTX2P47972 431 aa6.72□□□□□ -1.33
MARK3-216ENST00000558953 MCM2P49736 904 aa6.72□□□□□ -1.33
MARK3-216ENST00000558953 CLCN5P51795 746 aa6.72□□□□□ -1.33
MARK3-216ENST00000558953 YARSP54577 528 aaKnown RBP6.72□□□□□ -1.33
MARK3-216ENST00000558953 PEX3P56589 373 aa6.72□□□□□ -1.33
MARK3-216ENST00000558953 ATP2C1P98194 919 aaPredicted RBP6.72□□□□□ -1.33
MARK3-216ENST00000558953 PSMD5Q16401 504 aa6.72□□□□□ -1.33
MARK3-216ENST00000558953 IL17AQ16552 155 aa6.72□□□□□ -1.33
MARK3-216ENST00000558953 ZNF568Q3ZCX4 644 aa6.72□□□□□ -1.33
MARK3-216ENST00000558953 RTP2Q5QGT7 225 aa6.72□□□□□ -1.33
MARK3-216ENST00000558953 LIN9Q5TKA1 542 aa6.72□□□□□ -1.33
MARK3-216ENST00000558953 PHLDB3Q6NSJ2 640 aa6.72□□□□□ -1.33
MARK3-216ENST00000558953 RINT1Q6NUQ1 792 aa6.72□□□□□ -1.33
MARK3-216ENST00000558953 DCLRE1AQ6PJP8 1040 aa6.72□□□□□ -1.33
MARK3-216ENST00000558953 PRSS55Q6UWB4 352 aaPredicted RBP6.72□□□□□ -1.33
MARK3-216ENST00000558953 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.72□□□□□ -1.33
MARK3-216ENST00000558953 C1orf186Q6ZWK4 172 aa6.72□□□□□ -1.33
MARK3-216ENST00000558953 GLYCTKQ8IVS8 523 aa6.72□□□□□ -1.33
MARK3-216ENST00000558953 LNX1Q8TBB1 728 aaPredicted RBP6.72□□□□□ -1.33
MARK3-216ENST00000558953 NXPE3Q969Y0 559 aa6.72□□□□□ -1.33
MARK3-216ENST00000558953 ZNF707Q96C28 371 aaPredicted RBP6.72□□□□□ -1.33
MARK3-216ENST00000558953 TMX3Q96JJ7 454 aa6.72□□□□□ -1.33
MARK3-216ENST00000558953 UROC1Q96N76 676 aa6.72□□□□□ -1.33
MARK3-216ENST00000558953 PPP1R10Q96QC0 940 aaKnown RBP6.72□□□□□ -1.33
MARK3-216ENST00000558953 ACO2Q99798 780 aaKnown RBP6.72□□□□□ -1.33
MARK3-216ENST00000558953 CLSTN3Q9BQT9 956 aa6.72□□□□□ -1.33
MARK3-216ENST00000558953 TCHPQ9BT92 498 aa6.72□□□□□ -1.33
MARK3-216ENST00000558953 TIPINQ9BVW5 301 aa6.72□□□□□ -1.33
MARK3-216ENST00000558953 CCDC94Q9BW85 323 aaPredicted RBP6.72□□□□□ -1.33
MARK3-216ENST00000558953 MFSD1Q9H3U5 465 aa6.72□□□□□ -1.33
MARK3-216ENST00000558953 SMOC2Q9H3U7 446 aa6.72□□□□□ -1.33
MARK3-216ENST00000558953 KMT5AQ9NQR1 393 aa6.72□□□□□ -1.33
MARK3-216ENST00000558953 TOPORSQ9NS56 1045 aaPredicted RBP6.72□□□□□ -1.33
MARK3-216ENST00000558953 SLC38A7Q9NVC3 462 aa6.72□□□□□ -1.33
MARK3-216ENST00000558953 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.72□□□□□ -1.33
MARK3-216ENST00000558953 EPS15L1Q9UBC2 864 aa6.72□□□□□ -1.33
MARK3-216ENST00000558953 CACNG4Q9UBN1 327 aa6.72□□□□□ -1.33
MARK3-216ENST00000558953 DUSP12Q9UNI6 340 aa6.72□□□□□ -1.33
MARK3-216ENST00000558953 PDCD11Q14690 1871 aaKnown RBP6.72□□□□□ -1.33
MARK3-216ENST00000558953 SMIM28A0A1B0GU29 152 aa6.71□□□□□ -1.34
MARK3-216ENST00000558953 SLC26A4O43511 780 aa6.71□□□□□ -1.34
MARK3-216ENST00000558953 N4BP1O75113 896 aaKnown RBP6.71□□□□□ -1.34
MARK3-216ENST00000558953 B3GAT3O94766 335 aa6.71□□□□□ -1.34
MARK3-216ENST00000558953 MCF2P10911 925 aa6.71□□□□□ -1.34
MARK3-216ENST00000558953 LAMP2P13473 410 aa6.71□□□□□ -1.34
MARK3-216ENST00000558953 GUCY2CP25092 1073 aa6.71□□□□□ -1.34
MARK3-216ENST00000558953 GJB2P29033 226 aa6.71□□□□□ -1.34
MARK3-216ENST00000558953 CDC25AP30304 524 aa6.71□□□□□ -1.34
MARK3-216ENST00000558953 ATP1A2P50993 1020 aa6.71□□□□□ -1.34
MARK3-216ENST00000558953 GDF10P55107 478 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms