RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 NFKBIBQ15653 356 aa15.38■□□□□ 0.05
USP3-205ENST00000557884 SOWAHAQ2M3V2 549 aa15.38■□□□□ 0.05
USP3-205ENST00000557884 SGSM1Q2NKQ1 1148 aa15.38■□□□□ 0.05
USP3-205ENST00000557884 RARS2Q5T160 578 aaKnown RBP15.38■□□□□ 0.05
USP3-205ENST00000557884 LILRA6Q6PI73 481 aa15.38■□□□□ 0.05
USP3-205ENST00000557884 SYCE2Q6PIF2 218 aa15.38■□□□□ 0.05
USP3-205ENST00000557884 IRF2BP1Q8IU81 584 aa15.38■□□□□ 0.05
USP3-205ENST00000557884 TRIM59Q8IWR1 403 aa15.38■□□□□ 0.05
USP3-205ENST00000557884 THEM5Q8N1Q8 247 aa15.38■□□□□ 0.05
USP3-205ENST00000557884 SEMA4DQ92854 862 aa15.38■□□□□ 0.05
USP3-205ENST00000557884 MSLNLQ96KJ4 702 aa15.38■□□□□ 0.05
USP3-205ENST00000557884 MRPL45Q9BRJ2 306 aaKnown RBP15.38■□□□□ 0.05
USP3-205ENST00000557884 SMYD3Q9H7B4 428 aa15.38■□□□□ 0.05
USP3-205ENST00000557884 DZANK1Q9NVP4 752 aa15.38■□□□□ 0.05
USP3-205ENST00000557884 CD207Q9UJ71 328 aa15.38■□□□□ 0.05
USP3-205ENST00000557884 CDH22Q9UJ99 828 aa15.38■□□□□ 0.05
USP3-205ENST00000557884 SYCE3A1L190 88 aa15.37■□□□□ 0.05
USP3-205ENST00000557884 RFPL2O75678 378 aa15.37■□□□□ 0.05
USP3-205ENST00000557884 STAU1O95793 577 aaKnown RBP15.37■□□□□ 0.05
USP3-205ENST00000557884 ASS1P00966 412 aaKnown RBP15.37■□□□□ 0.05
USP3-205ENST00000557884 ACAT1P24752 427 aaKnown RBP15.37■□□□□ 0.05
USP3-205ENST00000557884 RAP1GAPP47736 663 aa15.37■□□□□ 0.05
USP3-205ENST00000557884 KCNQ1P51787 676 aa15.37■□□□□ 0.05
USP3-205ENST00000557884 CDH8P55286 799 aa15.37■□□□□ 0.05
USP3-205ENST00000557884 MYL7Q01449 175 aa15.37■□□□□ 0.05
USP3-205ENST00000557884 SKOR2Q2VWA4 1001 aaPredicted RBP15.37■□□□□ 0.05
USP3-205ENST00000557884 LEXMQ3ZCV2 418 aa15.37■□□□□ 0.05
USP3-205ENST00000557884 ZNF667Q5HYK9 610 aa15.37■□□□□ 0.05
USP3-205ENST00000557884 CT47A1Q5JQC4 288 aaPredicted RBP15.37■□□□□ 0.05
USP3-205ENST00000557884 TMC5Q6UXY8 1006 aa15.37■□□□□ 0.05
USP3-205ENST00000557884 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.37■□□□□ 0.05
USP3-205ENST00000557884 TMEM86AQ8N2M4 240 aa15.37■□□□□ 0.05
USP3-205ENST00000557884 FEZF2Q8TBJ5 459 aa15.37■□□□□ 0.05
USP3-205ENST00000557884 KBTBD7Q8WVZ9 684 aa15.37■□□□□ 0.05
USP3-205ENST00000557884 PGLYRP2Q96PD5 576 aa15.37■□□□□ 0.05
USP3-205ENST00000557884 IMPG2Q9BZV3 1241 aa15.37■□□□□ 0.05
USP3-205ENST00000557884 VRTNQ9H8Y1 702 aa15.37■□□□□ 0.05
USP3-205ENST00000557884 APOBEC3GQ9HC16 384 aaKnown RBP15.37■□□□□ 0.05
USP3-205ENST00000557884 DDX43Q9NXZ2 648 aaKnown RBP15.37■□□□□ 0.05
USP3-205ENST00000557884 FBXW11Q9UKB1 542 aa15.37■□□□□ 0.05
USP3-205ENST00000557884 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.37■□□□□ 0.05
USP3-205ENST00000557884 SCN1AP35498 2009 aa15.36■□□□□ 0.05
USP3-205ENST00000557884 WEE2P0C1S8 567 aa15.36■□□□□ 0.05
USP3-205ENST00000557884 HOXB8P17481 243 aaPredicted RBP15.36■□□□□ 0.05
USP3-205ENST00000557884 MTIF2P46199 727 aaKnown RBP15.36■□□□□ 0.05
USP3-205ENST00000557884 FMO5P49326 533 aa15.36■□□□□ 0.05
USP3-205ENST00000557884 MARSP56192 900 aaKnown RBP15.36■□□□□ 0.05
USP3-205ENST00000557884 NOP14P78316 857 aaKnown RBP15.36■□□□□ 0.05
USP3-205ENST00000557884 CCDC142Q17RM4 750 aa15.36■□□□□ 0.05
USP3-205ENST00000557884 ANO6Q4KMQ2 910 aa15.36■□□□□ 0.05
USP3-205ENST00000557884 SLC39A12Q504Y0 691 aa15.36■□□□□ 0.05
USP3-205ENST00000557884 LIN9Q5TKA1 542 aa15.36■□□□□ 0.05
USP3-205ENST00000557884 ELMSAN1Q6PJG2 1045 aa15.36■□□□□ 0.05
USP3-205ENST00000557884 RNF19BQ6ZMZ0 732 aa15.36■□□□□ 0.05
USP3-205ENST00000557884 LIMS2Q7Z4I7 341 aa15.36■□□□□ 0.05
USP3-205ENST00000557884 CCDC150Q8NCX0 1101 aa15.36■□□□□ 0.05
USP3-205ENST00000557884 FBXL13Q8NEE6 735 aa15.36■□□□□ 0.05
USP3-205ENST00000557884 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.36■□□□□ 0.05
USP3-205ENST00000557884 SLC7A14Q8TBB6 771 aa15.36■□□□□ 0.05
USP3-205ENST00000557884 ENOX1Q8TC92 643 aaKnown RBP15.36■□□□□ 0.05
USP3-205ENST00000557884 OXCT2Q9BYC2 517 aaPredicted RBP15.36■□□□□ 0.05
USP3-205ENST00000557884 ZCWPW1Q9H0M4 648 aa15.36■□□□□ 0.05
USP3-205ENST00000557884 SDCBP2Q9H190 292 aa15.36■□□□□ 0.05
USP3-205ENST00000557884 SNX25Q9H3E2 840 aa15.36■□□□□ 0.05
USP3-205ENST00000557884 THAP9Q9H5L6 903 aa15.36■□□□□ 0.05
USP3-205ENST00000557884 SFXN1Q9H9B4 322 aa15.36■□□□□ 0.05
USP3-205ENST00000557884 CYP4F11Q9HBI6 524 aa15.36■□□□□ 0.05
USP3-205ENST00000557884 RAB20Q9NX57 234 aa15.36■□□□□ 0.05
USP3-205ENST00000557884 MAGEC2Q9UBF1 373 aaPredicted RBP15.36■□□□□ 0.05
USP3-205ENST00000557884 NFE2L3Q9Y4A8 694 aa15.36■□□□□ 0.05
USP3-205ENST00000557884 VWA8A3KMH1 1905 aa15.36■□□□□ 0.05
USP3-205ENST00000557884 GRXCR2A6NFK2 248 aa15.35■□□□□ 0.05
USP3-205ENST00000557884 GABRDO14764 452 aa15.35■□□□□ 0.05
USP3-205ENST00000557884 ABLIM3O94929 683 aa15.35■□□□□ 0.05
USP3-205ENST00000557884 SEC24AO95486 1093 aa15.35■□□□□ 0.05
USP3-205ENST00000557884 AFPP02771 609 aaKnown RBP15.35■□□□□ 0.05
USP3-205ENST00000557884 C8AP07357 584 aa15.35■□□□□ 0.05
USP3-205ENST00000557884 PDGFRBP09619 1106 aa15.35■□□□□ 0.05
USP3-205ENST00000557884 P4HA1P13674 534 aa15.35■□□□□ 0.05
USP3-205ENST00000557884 WARSP23381 471 aaKnown RBP15.35■□□□□ 0.05
USP3-205ENST00000557884 LMO2P25791 158 aa15.35■□□□□ 0.05
USP3-205ENST00000557884 ELF1P32519 619 aa15.35■□□□□ 0.05
USP3-205ENST00000557884 LHX1P48742 406 aa15.35■□□□□ 0.05
USP3-205ENST00000557884 PSMC1P62191 440 aaKnown RBP15.35■□□□□ 0.05
USP3-205ENST00000557884 MRPS5P82675 430 aaKnown RBP15.35■□□□□ 0.05
USP3-205ENST00000557884 TSPY1Q01534 308 aa15.35■□□□□ 0.05
USP3-205ENST00000557884 ADCY1Q08828 1119 aa15.35■□□□□ 0.05
USP3-205ENST00000557884 KCNH2Q12809 1159 aa15.35■□□□□ 0.05
USP3-205ENST00000557884 SMAD4Q13485 552 aaKnown RBP15.35■□□□□ 0.05
USP3-205ENST00000557884 TPGS2Q68CL5 300 aa15.35■□□□□ 0.05
USP3-205ENST00000557884 PTCRAQ6ISU1 281 aaPredicted RBP15.35■□□□□ 0.05
USP3-205ENST00000557884 DPH6Q7L8W6 267 aa15.35■□□□□ 0.05
USP3-205ENST00000557884 LRRTM3Q86VH5 581 aa15.35■□□□□ 0.05
USP3-205ENST00000557884 SMRP1Q8NCR6 262 aa15.35■□□□□ 0.05
USP3-205ENST00000557884 OR6B3Q8NGW1 331 aa15.35■□□□□ 0.05
USP3-205ENST00000557884 ZNF461Q8TAF7 563 aa15.35■□□□□ 0.05
USP3-205ENST00000557884 TAF4BQ92750 862 aa15.35■□□□□ 0.05
USP3-205ENST00000557884 S1PR5Q9H228 398 aa15.35■□□□□ 0.05
USP3-205ENST00000557884 PLEKHA4Q9H4M7 779 aa15.35■□□□□ 0.05
USP3-205ENST00000557884 SAMSN1Q9NSI8 373 aaKnown RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 164.4 ms