RNA–Protein interactions for RNA: ENST00000556951.5

PSEN1-219, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-219ENST00000556951 TK2O00142 265 aa13.85□□□□□ -0.19
PSEN1-219ENST00000556951 N4BP3O15049 544 aa13.85□□□□□ -0.19
PSEN1-219ENST00000556951 LRG1P02750 347 aa13.85□□□□□ -0.19
PSEN1-219ENST00000556951 ATF2P15336 505 aa13.85□□□□□ -0.19
PSEN1-219ENST00000556951 GJA1P17302 382 aa13.85□□□□□ -0.19
PSEN1-219ENST00000556951 HOXA6P31267 233 aa13.85□□□□□ -0.19
PSEN1-219ENST00000556951 SOX4Q06945 474 aaPredicted RBP13.85□□□□□ -0.19
PSEN1-219ENST00000556951 PDIA5Q14554 519 aa13.85□□□□□ -0.19
PSEN1-219ENST00000556951 PLA2G2CQ5R387 149 aa13.85□□□□□ -0.19
PSEN1-219ENST00000556951 HEATR6Q6AI08 1181 aaKnown RBP13.85□□□□□ -0.19
PSEN1-219ENST00000556951 Q6ZS52 159 aa13.85□□□□□ -0.19
PSEN1-219ENST00000556951 RBM43Q6ZSC3 357 aaKnown RBP13.85□□□□□ -0.19
PSEN1-219ENST00000556951 TMEFF1Q8IYR6 380 aa13.85□□□□□ -0.19
PSEN1-219ENST00000556951 EPSTI1Q96J88 318 aa13.85□□□□□ -0.19
PSEN1-219ENST00000556951 LOXL4Q96JB6 756 aa13.85□□□□□ -0.19
PSEN1-219ENST00000556951 CCDC113Q9H0I3 377 aa13.85□□□□□ -0.19
PSEN1-219ENST00000556951 USP25Q9UHP3 1055 aa13.85□□□□□ -0.19
PSEN1-219ENST00000556951 ACACAQ13085 2346 aa13.85□□□□□ -0.19
PSEN1-219ENST00000556951 PTPN13Q12923 2485 aa13.84□□□□□ -0.19
PSEN1-219ENST00000556951 LRRIQ4A6NIV6 560 aa13.84□□□□□ -0.19
PSEN1-219ENST00000556951 J3QKU1 62 aa13.84□□□□□ -0.19
PSEN1-219ENST00000556951 ZNF197O14709 1029 aa13.84□□□□□ -0.19
PSEN1-219ENST00000556951 ZNF263O14978 683 aa13.84□□□□□ -0.19
PSEN1-219ENST00000556951 MARCH6O60337 910 aa13.84□□□□□ -0.19
PSEN1-219ENST00000556951 XRCC6P12956 609 aaKnown RBP eCLIP13.84□□□□□ -0.19
PSEN1-219ENST00000556951 CSRP1P21291 193 aaKnown RBP13.84□□□□□ -0.19
PSEN1-219ENST00000556951 TXLNAP40222 546 aa13.84□□□□□ -0.19
PSEN1-219ENST00000556951 TXKP42681 527 aa13.84□□□□□ -0.19
PSEN1-219ENST00000556951 SOX9P48436 509 aa13.84□□□□□ -0.19
PSEN1-219ENST00000556951 FXR2P51116 673 aaKnown RBP eCLIP13.84□□□□□ -0.19
PSEN1-219ENST00000556951 EPHA5P54756 1037 aa13.84□□□□□ -0.19
PSEN1-219ENST00000556951 SRSF1Q07955 248 aaKnown RBP eCLIP13.84□□□□□ -0.19
PSEN1-219ENST00000556951 GLRA4Q5JXX5 417 aa13.84□□□□□ -0.19
PSEN1-219ENST00000556951 TXNDC11Q6PKC3 985 aa13.84□□□□□ -0.19
PSEN1-219ENST00000556951 USP49Q70CQ1 688 aa13.84□□□□□ -0.19
PSEN1-219ENST00000556951 CEP68Q76N32 757 aa13.84□□□□□ -0.19
PSEN1-219ENST00000556951 MAEAQ7L5Y9 396 aa13.84□□□□□ -0.19
PSEN1-219ENST00000556951 WDR5BQ86VZ2 330 aa13.84□□□□□ -0.19
PSEN1-219ENST00000556951 SLFN12Q8IYM2 578 aa13.84□□□□□ -0.19
PSEN1-219ENST00000556951 DEPDC1BQ8WUY9 529 aa13.84□□□□□ -0.19
PSEN1-219ENST00000556951 LRRC3BQ96PB8 259 aa13.84□□□□□ -0.19
PSEN1-219ENST00000556951 LRRC3Q9BY71 257 aa13.84□□□□□ -0.19
PSEN1-219ENST00000556951 RAB34Q9BZG1 259 aa13.84□□□□□ -0.19
PSEN1-219ENST00000556951 HOOK1Q9UJC3 728 aaKnown RBP13.84□□□□□ -0.19
PSEN1-219ENST00000556951 GDAQ9Y2T3 454 aa13.84□□□□□ -0.19
PSEN1-219ENST00000556951 INSL5Q9Y5Q6 135 aa13.84□□□□□ -0.19
PSEN1-219ENST00000556951 TRIP11Q15643 1979 aa13.83□□□□□ -0.19
PSEN1-219ENST00000556951 FAM221BA6H8Z2 402 aa13.83□□□□□ -0.2
PSEN1-219ENST00000556951 HEPACAM2A8MVW5 462 aa13.83□□□□□ -0.2
PSEN1-219ENST00000556951 ACKR2O00590 384 aa13.83□□□□□ -0.2
PSEN1-219ENST00000556951 POLR2DO15514 142 aaKnown RBP13.83□□□□□ -0.2
PSEN1-219ENST00000556951 USO1O60763 962 aaKnown RBP13.83□□□□□ -0.2
PSEN1-219ENST00000556951 EPN2O95208 641 aa13.83□□□□□ -0.2
PSEN1-219ENST00000556951 SPATA31C1P0DKV0 1188 aa13.83□□□□□ -0.2
PSEN1-219ENST00000556951 ELF1P32519 619 aa13.83□□□□□ -0.2
PSEN1-219ENST00000556951 UBA7P41226 1012 aa13.83□□□□□ -0.2
PSEN1-219ENST00000556951 RAP1GAPP47736 663 aa13.83□□□□□ -0.2
PSEN1-219ENST00000556951 XKR4Q5GH76 650 aa13.83□□□□□ -0.2
PSEN1-219ENST00000556951 NT5DC1Q5TFE4 455 aa13.83□□□□□ -0.2
PSEN1-219ENST00000556951 DAB2IPQ5VWQ8 1189 aa13.83□□□□□ -0.2
PSEN1-219ENST00000556951 ALKAL1Q6UXT8 129 aa13.83□□□□□ -0.2
PSEN1-219ENST00000556951 KRBA2Q6ZNG9 492 aa13.83□□□□□ -0.2
PSEN1-219ENST00000556951 ZSCAN18Q8TBC5 510 aaPredicted RBP13.83□□□□□ -0.2
PSEN1-219ENST00000556951 SLC39A7Q92504 469 aa13.83□□□□□ -0.2
PSEN1-219ENST00000556951 CCDC34Q96HJ3 373 aa13.83□□□□□ -0.2
PSEN1-219ENST00000556951 UBL7Q96S82 380 aaPredicted RBP13.83□□□□□ -0.2
PSEN1-219ENST00000556951 MKNK1Q9BUB5 465 aa13.83□□□□□ -0.2
PSEN1-219ENST00000556951 CCSER1Q9C0I3 900 aa13.83□□□□□ -0.2
PSEN1-219ENST00000556951 TSPY26PQ9H489 355 aa13.83□□□□□ -0.2
PSEN1-219ENST00000556951 CYP4F11Q9HBI6 524 aa13.83□□□□□ -0.2
PSEN1-219ENST00000556951 SCUBE2Q9NQ36 999 aa13.83□□□□□ -0.2
PSEN1-219ENST00000556951 PCDHA12Q9UN75 941 aa13.83□□□□□ -0.2
PSEN1-219ENST00000556951 SMIM28A0A1B0GU29 152 aa13.82□□□□□ -0.2
PSEN1-219ENST00000556951 MYBPHLA2RUH7 354 aa13.82□□□□□ -0.2
PSEN1-219ENST00000556951 GOLGA6L3A6NEY3 463 aa13.82□□□□□ -0.2
PSEN1-219ENST00000556951 C4orf47A7E2U8 309 aa13.82□□□□□ -0.2
PSEN1-219ENST00000556951 PRRG1O14668 218 aa13.82□□□□□ -0.2
PSEN1-219ENST00000556951 ARPP19P56211 112 aa13.82□□□□□ -0.2
PSEN1-219ENST00000556951 PRPF4BQ13523 1007 aaKnown RBP13.82□□□□□ -0.2
PSEN1-219ENST00000556951 PDZD4Q76G19 769 aaPredicted RBP13.82□□□□□ -0.2
PSEN1-219ENST00000556951 IGSF22Q8N9C0 903 aa13.82□□□□□ -0.2
PSEN1-219ENST00000556951 IQUBQ8NA54 791 aa13.82□□□□□ -0.2
PSEN1-219ENST00000556951 SHKBP1Q8TBC3 707 aa13.82□□□□□ -0.2
PSEN1-219ENST00000556951 UROC1Q96N76 676 aa13.82□□□□□ -0.2
PSEN1-219ENST00000556951 PANK2Q9BZ23 570 aa13.82□□□□□ -0.2
PSEN1-219ENST00000556951 SMOC1Q9H4F8 434 aa13.82□□□□□ -0.2
PSEN1-219ENST00000556951 CCDC39Q9UFE4 941 aa13.82□□□□□ -0.2
PSEN1-219ENST00000556951 FBXL5Q9UKA1 691 aa13.82□□□□□ -0.2
PSEN1-219ENST00000556951 MYO9AB2RTY4 2548 aa13.82□□□□□ -0.2
PSEN1-219ENST00000556951 SLC38A8A6NNN8 435 aa13.81□□□□□ -0.2
PSEN1-219ENST00000556951 CHADO15335 359 aa13.81□□□□□ -0.2
PSEN1-219ENST00000556951 MAP3K13O43283 966 aa13.81□□□□□ -0.2
PSEN1-219ENST00000556951 SLC26A4O43511 780 aa13.81□□□□□ -0.2
PSEN1-219ENST00000556951 TRAPPC3O43617 180 aa13.81□□□□□ -0.2
PSEN1-219ENST00000556951 VNN2O95498 520 aa13.81□□□□□ -0.2
PSEN1-219ENST00000556951 PRKCBP05771 671 aa13.81□□□□□ -0.2
PSEN1-219ENST00000556951 SLFN14P0C7P3 912 aa13.81□□□□□ -0.2
PSEN1-219ENST00000556951 CCDC192P0DO97 292 aa13.81□□□□□ -0.2
PSEN1-219ENST00000556951 MYL4P12829 197 aa13.81□□□□□ -0.2
PSEN1-219ENST00000556951 FCHO2Q0JRZ9 810 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms