RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 EYA2O00167 538 aa5.84□□□□□ -1.47
SRP54-211ENST00000556445 FOXS1O43638 330 aa5.84□□□□□ -1.47
SRP54-211ENST00000556445 PRLP01236 227 aa5.84□□□□□ -1.47
SRP54-211ENST00000556445 CSF1RP07333 972 aa5.84□□□□□ -1.47
SRP54-211ENST00000556445 TGFB3P10600 412 aa5.84□□□□□ -1.47
SRP54-211ENST00000556445 APEX1P27695 318 aaKnown RBP5.84□□□□□ -1.47
SRP54-211ENST00000556445 CYP2C19P33261 490 aa5.84□□□□□ -1.47
SRP54-211ENST00000556445 TBX2Q13207 712 aaPredicted RBP5.84□□□□□ -1.47
SRP54-211ENST00000556445 IFIT5Q13325 482 aaKnown RBP5.84□□□□□ -1.47
SRP54-211ENST00000556445 PCOLCEQ15113 449 aa5.84□□□□□ -1.47
SRP54-211ENST00000556445 ARHGAP29Q52LW3 1261 aa5.84□□□□□ -1.47
SRP54-211ENST00000556445 ZMAT1Q5H9K5 638 aa5.84□□□□□ -1.47
SRP54-211ENST00000556445 EPHA10Q5JZY3 1008 aa5.84□□□□□ -1.47
SRP54-211ENST00000556445 AGBL4Q5VU57 503 aa5.84□□□□□ -1.47
SRP54-211ENST00000556445 GRAMD4Q6IC98 578 aa5.84□□□□□ -1.47
SRP54-211ENST00000556445 TCTN3Q6NUS6 607 aa5.84□□□□□ -1.47
SRP54-211ENST00000556445 MZT2BQ6NZ67 158 aa5.84□□□□□ -1.47
SRP54-211ENST00000556445 SRLQ86TD4 932 aa5.84□□□□□ -1.47
SRP54-211ENST00000556445 ZSCAN30Q86W11 494 aa5.84□□□□□ -1.47
SRP54-211ENST00000556445 CBARPQ8N350 705 aaPredicted RBP5.84□□□□□ -1.47
SRP54-211ENST00000556445 KIAA1958Q8N8K9 716 aa5.84□□□□□ -1.47
SRP54-211ENST00000556445 CHST13Q8NET6 341 aa5.84□□□□□ -1.47
SRP54-211ENST00000556445 WDR48Q8TAF3 677 aa5.84□□□□□ -1.47
SRP54-211ENST00000556445 CALML6Q8TD86 181 aa5.84□□□□□ -1.47
SRP54-211ENST00000556445 CFHR4Q92496 578 aa5.84□□□□□ -1.47
SRP54-211ENST00000556445 DVL3Q92997 716 aaPredicted RBP5.84□□□□□ -1.47
SRP54-211ENST00000556445 EAF2Q96CJ1 260 aaPredicted RBP5.84□□□□□ -1.47
SRP54-211ENST00000556445 CDK5RAP3Q96JB5 506 aa5.84□□□□□ -1.47
SRP54-211ENST00000556445 C16orf92Q96LL3 132 aa5.84□□□□□ -1.47
SRP54-211ENST00000556445 TTC1Q99614 292 aa5.84□□□□□ -1.47
SRP54-211ENST00000556445 GPR20Q99678 358 aa5.84□□□□□ -1.47
SRP54-211ENST00000556445 MENTQ9BUN1 341 aa5.84□□□□□ -1.47
SRP54-211ENST00000556445 SLC13A1Q9BZW2 595 aa5.84□□□□□ -1.47
SRP54-211ENST00000556445 SIL1Q9H173 461 aa5.84□□□□□ -1.47
SRP54-211ENST00000556445 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.84□□□□□ -1.47
SRP54-211ENST00000556445 RIC8AQ9NPQ8 531 aa5.84□□□□□ -1.47
SRP54-211ENST00000556445 ACSS2Q9NR19 701 aa5.84□□□□□ -1.47
SRP54-211ENST00000556445 JAG2Q9Y219 1238 aa5.84□□□□□ -1.47
SRP54-211ENST00000556445 TJP1Q07157 1748 aa5.84□□□□□ -1.47
SRP54-211ENST00000556445 MYH3P11055 1940 aa5.84□□□□□ -1.48
SRP54-211ENST00000556445 SPEF2Q9C093 1822 aa5.83□□□□□ -1.48
SRP54-211ENST00000556445 PALLDQ8WX93 1383 aa5.83□□□□□ -1.48
SRP54-211ENST00000556445 ABCC12Q96J65 1359 aa5.83□□□□□ -1.48
SRP54-211ENST00000556445 RREB1Q92766 1687 aa5.83□□□□□ -1.48
SRP54-211ENST00000556445 ANKRD18BA2A2Z9 1011 aa5.83□□□□□ -1.48
SRP54-211ENST00000556445 A6NCN8 305 aa5.83□□□□□ -1.48
SRP54-211ENST00000556445 F5H423 210 aaPredicted RBP5.83□□□□□ -1.48
SRP54-211ENST00000556445 H7C1D1 291 aa5.83□□□□□ -1.48
SRP54-211ENST00000556445 NEMP1O14524 444 aa5.83□□□□□ -1.48
SRP54-211ENST00000556445 ARHGAP6O43182 974 aa5.83□□□□□ -1.48
SRP54-211ENST00000556445 INSRRP14616 1297 aa5.83□□□□□ -1.48
SRP54-211ENST00000556445 ZKSCAN1P17029 563 aaPredicted RBP5.83□□□□□ -1.48
SRP54-211ENST00000556445 BPIP17213 487 aa5.83□□□□□ -1.48
SRP54-211ENST00000556445 PTX3P26022 381 aaPredicted RBP5.83□□□□□ -1.48
SRP54-211ENST00000556445 PSMA5P28066 241 aa5.83□□□□□ -1.48
SRP54-211ENST00000556445 HSPA4P34932 840 aa5.83□□□□□ -1.48
SRP54-211ENST00000556445 CRKLP46109 303 aaKnown RBP5.83□□□□□ -1.48
SRP54-211ENST00000556445 RXRGP48443 463 aa5.83□□□□□ -1.48
SRP54-211ENST00000556445 ALDH5A1P51649 535 aaPredicted RBP5.83□□□□□ -1.48
SRP54-211ENST00000556445 STAT5BP51692 787 aa5.83□□□□□ -1.48
SRP54-211ENST00000556445 AK2P54819 239 aa5.83□□□□□ -1.48
SRP54-211ENST00000556445 RAC3P60763 192 aa5.83□□□□□ -1.48
SRP54-211ENST00000556445 NUCB2P80303 420 aa5.83□□□□□ -1.48
SRP54-211ENST00000556445 ADCY1Q08828 1119 aa5.83□□□□□ -1.48
SRP54-211ENST00000556445 TFCP2Q12800 502 aa5.83□□□□□ -1.48
SRP54-211ENST00000556445 PDE1CQ14123 709 aaPredicted RBP5.83□□□□□ -1.48
SRP54-211ENST00000556445 ABCB5Q2M3G0 1257 aa5.83□□□□□ -1.48
SRP54-211ENST00000556445 ZNF568Q3ZCX4 644 aa5.83□□□□□ -1.48
SRP54-211ENST00000556445 CCDC158Q5M9N0 1113 aa5.83□□□□□ -1.48
SRP54-211ENST00000556445 WDR45BQ5MNZ6 344 aa5.83□□□□□ -1.48
SRP54-211ENST00000556445 TMEM240Q5SV17 173 aa5.83□□□□□ -1.48
SRP54-211ENST00000556445 MEX3CQ5U5Q3 659 aaKnown RBP5.83□□□□□ -1.48
SRP54-211ENST00000556445 ARMC3Q5W041 872 aa5.83□□□□□ -1.48
SRP54-211ENST00000556445 TSHZ3Q63HK5 1081 aa5.83□□□□□ -1.48
SRP54-211ENST00000556445 ZNF34Q8IZ26 560 aa5.83□□□□□ -1.48
SRP54-211ENST00000556445 CPA6Q8N4T0 437 aa5.83□□□□□ -1.48
SRP54-211ENST00000556445 Q8TCH9 128 aa5.83□□□□□ -1.48
SRP54-211ENST00000556445 POF1BQ8WVV4 589 aa5.83□□□□□ -1.48
SRP54-211ENST00000556445 TSPAN18Q96SJ8 248 aa5.83□□□□□ -1.48
SRP54-211ENST00000556445 FSD1Q9BTV5 496 aa5.83□□□□□ -1.48
SRP54-211ENST00000556445 NAA15Q9BXJ9 866 aaKnown RBP5.83□□□□□ -1.48
SRP54-211ENST00000556445 PCIF1Q9H4Z3 704 aa5.83□□□□□ -1.48
SRP54-211ENST00000556445 IFT22Q9H7X7 185 aa5.83□□□□□ -1.48
SRP54-211ENST00000556445 TRMT112Q9UI30 125 aaKnown RBP5.83□□□□□ -1.48
SRP54-211ENST00000556445 OAZ3Q9UMX2 235 aa5.83□□□□□ -1.48
SRP54-211ENST00000556445 MYRFQ9Y2G1 1151 aa5.83□□□□□ -1.48
SRP54-211ENST00000556445 ZBTB1Q9Y2K1 713 aa5.83□□□□□ -1.48
SRP54-211ENST00000556445 BCL9LQ86UU0 1499 aa5.83□□□□□ -1.48
SRP54-211ENST00000556445 SH3TC1Q8TE82 1336 aa5.82□□□□□ -1.48
SRP54-211ENST00000556445 J3KRW8 73 aa5.82□□□□□ -1.48
SRP54-211ENST00000556445 K7ESF4 209 aa5.82□□□□□ -1.48
SRP54-211ENST00000556445 FZD9O00144 591 aa5.82□□□□□ -1.48
SRP54-211ENST00000556445 ZEB2O60315 1214 aa5.82□□□□□ -1.48
SRP54-211ENST00000556445 ZNF623O75123 536 aa5.82□□□□□ -1.48
SRP54-211ENST00000556445 SNUPNO95149 360 aaKnown RBP5.82□□□□□ -1.48
SRP54-211ENST00000556445 CYP17A1P05093 508 aa5.82□□□□□ -1.48
SRP54-211ENST00000556445 ZFYP08048 801 aaPredicted RBP5.82□□□□□ -1.48
SRP54-211ENST00000556445 ATP2A2P16615 1042 aaKnown RBP5.82□□□□□ -1.48
SRP54-211ENST00000556445 ID4P47928 161 aa5.82□□□□□ -1.48
SRP54-211ENST00000556445 KCNJ4P48050 445 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms