RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 DCDC2CA8MYV0 355 aa15.76■□□□□ 0.11
ARHGEF40-207ENST00000556399 TRIM49D1C9J1S8 452 aa15.76■□□□□ 0.11
ARHGEF40-207ENST00000556399 PIK3R2O00459 728 aa15.76■□□□□ 0.11
ARHGEF40-207ENST00000556399 KPNA2P52292 529 aaKnown RBP15.76■□□□□ 0.11
ARHGEF40-207ENST00000556399 KIF22Q14807 665 aa15.76■□□□□ 0.11
ARHGEF40-207ENST00000556399 XKR3Q5GH77 459 aa15.76■□□□□ 0.11
ARHGEF40-207ENST00000556399 TTC39BQ5VTQ0 682 aaPredicted RBP15.76■□□□□ 0.11
ARHGEF40-207ENST00000556399 ZNF572Q7Z3I7 529 aaPredicted RBP15.76■□□□□ 0.11
ARHGEF40-207ENST00000556399 ANKRD27Q96NW4 1050 aa15.76■□□□□ 0.11
ARHGEF40-207ENST00000556399 LRRC4Q9HBW1 653 aa15.76■□□□□ 0.11
ARHGEF40-207ENST00000556399 DCCP43146 1447 aa15.76■□□□□ 0.11
ARHGEF40-207ENST00000556399 MAGEA13PA6NCF6 341 aa15.76■□□□□ 0.11
ARHGEF40-207ENST00000556399 ADAMTS3O15072 1205 aa15.76■□□□□ 0.11
ARHGEF40-207ENST00000556399 BRD2P25440 801 aaKnown RBP15.76■□□□□ 0.11
ARHGEF40-207ENST00000556399 MMP13P45452 471 aa15.76■□□□□ 0.11
ARHGEF40-207ENST00000556399 NBPF20Q3BBV1 942 aa15.76■□□□□ 0.11
ARHGEF40-207ENST00000556399 TEX2Q8IWB9 1127 aa15.76■□□□□ 0.11
ARHGEF40-207ENST00000556399 TMEM121Q9BTD3 319 aa15.76■□□□□ 0.11
ARHGEF40-207ENST00000556399 SLC24A2Q9UI40 661 aa15.76■□□□□ 0.11
ARHGEF40-207ENST00000556399 EPHB2P29323 1055 aa15.76■□□□□ 0.11
ARHGEF40-207ENST00000556399 RARS2Q5T160 578 aaKnown RBP15.76■□□□□ 0.11
ARHGEF40-207ENST00000556399 OTOP1Q7RTM1 612 aa15.76■□□□□ 0.11
ARHGEF40-207ENST00000556399 SEPT12Q8IYM1 358 aa15.76■□□□□ 0.11
ARHGEF40-207ENST00000556399 RASGEF1CQ8N431 466 aa15.76■□□□□ 0.11
ARHGEF40-207ENST00000556399 GMCL1Q96IK5 515 aa15.76■□□□□ 0.11
ARHGEF40-207ENST00000556399 WDR35Q9P2L0 1181 aa15.76■□□□□ 0.11
ARHGEF40-207ENST00000556399 KCTD2Q14681 263 aa15.76■□□□□ 0.11
ARHGEF40-207ENST00000556399 MCOLN2Q8IZK6 566 aa15.76■□□□□ 0.11
ARHGEF40-207ENST00000556399 ELMO3Q96BJ8 720 aa15.76■□□□□ 0.11
ARHGEF40-207ENST00000556399 UPF3AQ9H1J1 476 aaKnown RBP15.76■□□□□ 0.11
ARHGEF40-207ENST00000556399 CHD2O14647 1828 aaKnown RBP15.75■□□□□ 0.11
ARHGEF40-207ENST00000556399 MYL2P10916 166 aa15.75■□□□□ 0.11
ARHGEF40-207ENST00000556399 SPP2Q13103 211 aa15.75■□□□□ 0.11
ARHGEF40-207ENST00000556399 MTFR1Q15390 333 aa15.75■□□□□ 0.11
ARHGEF40-207ENST00000556399 TRIP10Q15642 601 aa15.75■□□□□ 0.11
ARHGEF40-207ENST00000556399 SV2AQ7L0J3 742 aa15.75■□□□□ 0.11
ARHGEF40-207ENST00000556399 FAM167AQ96KS9 214 aa15.75■□□□□ 0.11
ARHGEF40-207ENST00000556399 PNMA3Q9UL41 463 aa15.75■□□□□ 0.11
ARHGEF40-207ENST00000556399 CBX6O95503 412 aa15.75■□□□□ 0.11
ARHGEF40-207ENST00000556399 PDGFRAP16234 1089 aa15.75■□□□□ 0.11
ARHGEF40-207ENST00000556399 NPTX2P47972 431 aa15.75■□□□□ 0.11
ARHGEF40-207ENST00000556399 PTK6Q13882 451 aa15.75■□□□□ 0.11
ARHGEF40-207ENST00000556399 BAATQ14032 418 aaPredicted RBP15.75■□□□□ 0.11
ARHGEF40-207ENST00000556399 FAM47CQ5HY64 1035 aa15.75■□□□□ 0.11
ARHGEF40-207ENST00000556399 WASHC2DQ5SRD0 308 aa15.75■□□□□ 0.11
ARHGEF40-207ENST00000556399 EXOC3L1Q86VI1 746 aa15.75■□□□□ 0.11
ARHGEF40-207ENST00000556399 APLFQ8IW19 511 aaPredicted RBP15.75■□□□□ 0.11
ARHGEF40-207ENST00000556399 NDUFAF2Q8N183 169 aa15.75■□□□□ 0.11
ARHGEF40-207ENST00000556399 KAT5Q92993 513 aa15.75■□□□□ 0.11
ARHGEF40-207ENST00000556399 FBXO28Q9NVF7 368 aa15.75■□□□□ 0.11
ARHGEF40-207ENST00000556399 FRMPD4Q14CM0 1322 aa15.75■□□□□ 0.11
ARHGEF40-207ENST00000556399 SESN2P58004 480 aaPredicted RBP15.75■□□□□ 0.11
ARHGEF40-207ENST00000556399 PRKCEQ02156 737 aa15.75■□□□□ 0.11
ARHGEF40-207ENST00000556399 EMC2Q15006 297 aa15.75■□□□□ 0.11
ARHGEF40-207ENST00000556399 SGSM1Q2NKQ1 1148 aa15.75■□□□□ 0.11
ARHGEF40-207ENST00000556399 TFDP3Q5H9I0 405 aa15.75■□□□□ 0.11
ARHGEF40-207ENST00000556399 ALG3Q92685 438 aa15.75■□□□□ 0.11
ARHGEF40-207ENST00000556399 ATXN7L3BQ96GX2 97 aa15.75■□□□□ 0.11
ARHGEF40-207ENST00000556399 DDX4Q9NQI0 724 aaKnown RBP15.75■□□□□ 0.11
ARHGEF40-207ENST00000556399 AFG3L2Q9Y4W6 797 aa15.75■□□□□ 0.11
ARHGEF40-207ENST00000556399 SPEF2Q9C093 1822 aa15.75■□□□□ 0.11
ARHGEF40-207ENST00000556399 CALB2P22676 271 aa15.75■□□□□ 0.11
ARHGEF40-207ENST00000556399 ACER1Q8TDN7 264 aa15.75■□□□□ 0.11
ARHGEF40-207ENST00000556399 DRC3Q9H069 523 aa15.75■□□□□ 0.11
ARHGEF40-207ENST00000556399 TRPV6Q9H1D0 765 aa15.75■□□□□ 0.11
ARHGEF40-207ENST00000556399 PDP2Q9P2J9 529 aa15.75■□□□□ 0.11
ARHGEF40-207ENST00000556399 MCM8Q9UJA3 840 aa15.75■□□□□ 0.11
ARHGEF40-207ENST00000556399 TRPC5Q9UL62 973 aaPredicted RBP15.75■□□□□ 0.11
ARHGEF40-207ENST00000556399 hCG_2014768A0A024R1R8 64 aa15.74■□□□□ 0.11
ARHGEF40-207ENST00000556399 XRCC4Q13426 336 aa15.74■□□□□ 0.11
ARHGEF40-207ENST00000556399 PKN2Q16513 984 aaKnown RBP15.74■□□□□ 0.11
ARHGEF40-207ENST00000556399 SIX6OS1Q8N1H7 587 aa15.74■□□□□ 0.11
ARHGEF40-207ENST00000556399 TMC2Q8TDI7 906 aa15.74■□□□□ 0.11
ARHGEF40-207ENST00000556399 TMEM120AQ9BXJ8 343 aa15.74■□□□□ 0.11
ARHGEF40-207ENST00000556399 PAK5Q9P286 719 aa15.74■□□□□ 0.11
ARHGEF40-207ENST00000556399 DDTLA6NHG4 134 aaPredicted RBP15.74■□□□□ 0.11
ARHGEF40-207ENST00000556399 GNAT1P11488 350 aa15.74■□□□□ 0.11
ARHGEF40-207ENST00000556399 DLG4P78352 724 aa15.74■□□□□ 0.11
ARHGEF40-207ENST00000556399 CNGA3Q16281 694 aa15.74■□□□□ 0.11
ARHGEF40-207ENST00000556399 TKFCQ3LXA3 575 aa15.74■□□□□ 0.11
ARHGEF40-207ENST00000556399 EPS8L1Q8TE68 723 aa15.74■□□□□ 0.11
ARHGEF40-207ENST00000556399 STK32AQ8WU08 396 aa15.74■□□□□ 0.11
ARHGEF40-207ENST00000556399 ART4Q93070 314 aa15.74■□□□□ 0.11
ARHGEF40-207ENST00000556399 OSBPL7Q9BZF2 842 aa15.74■□□□□ 0.11
ARHGEF40-207ENST00000556399 RSAD1Q9HA92 442 aa15.74■□□□□ 0.11
ARHGEF40-207ENST00000556399 ADA2Q9NZK5 511 aa15.74■□□□□ 0.11
ARHGEF40-207ENST00000556399 ARHGAP10A1A4S6 786 aa15.74■□□□□ 0.11
ARHGEF40-207ENST00000556399 DNM1LO00429 736 aa15.74■□□□□ 0.11
ARHGEF40-207ENST00000556399 ZC3H11AO75152 810 aaKnown RBP eCLIP15.74■□□□□ 0.11
ARHGEF40-207ENST00000556399 KLHL2O95198 593 aa15.74■□□□□ 0.11
ARHGEF40-207ENST00000556399 NR3C2P08235 984 aa15.74■□□□□ 0.11
ARHGEF40-207ENST00000556399 SERPINB9P50453 376 aa15.74■□□□□ 0.11
ARHGEF40-207ENST00000556399 GABPAQ06546 454 aa15.74■□□□□ 0.11
ARHGEF40-207ENST00000556399 AP1B1Q10567 949 aa15.74■□□□□ 0.11
ARHGEF40-207ENST00000556399 CCNYL1Q8N7R7 359 aa15.74■□□□□ 0.11
ARHGEF40-207ENST00000556399 GMCL1P1Q8NEA9 526 aa15.74■□□□□ 0.11
ARHGEF40-207ENST00000556399 ERVK-5Q9HDB9 667 aa15.74■□□□□ 0.11
ARHGEF40-207ENST00000556399 ACP6Q9NPH0 428 aa15.74■□□□□ 0.11
ARHGEF40-207ENST00000556399 DSG1Q02413 1049 aa15.73■□□□□ 0.11
ARHGEF40-207ENST00000556399 KPNB1Q14974 876 aaKnown RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms