RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 TAF6P49848 677 aa10.4□□□□□ -0.74
SRP54-210ENST00000556380 DLG4P78352 724 aa10.4□□□□□ -0.74
SRP54-210ENST00000556380 SMAD4Q13485 552 aaKnown RBP10.4□□□□□ -0.74
SRP54-210ENST00000556380 CLUL1Q15846 466 aa10.4□□□□□ -0.74
SRP54-210ENST00000556380 PUS10Q3MIT2 529 aaKnown RBP10.4□□□□□ -0.74
SRP54-210ENST00000556380 C15orf39Q6ZRI6 1047 aa10.4□□□□□ -0.74
SRP54-210ENST00000556380 EP400NLQ6ZTU2 488 aa10.4□□□□□ -0.74
SRP54-210ENST00000556380 PALB2Q86YC2 1186 aa10.4□□□□□ -0.74
SRP54-210ENST00000556380 C12orf76Q8N812 135 aaPredicted RBP10.4□□□□□ -0.74
SRP54-210ENST00000556380 TRIML1Q8N9V2 468 aa10.4□□□□□ -0.74
SRP54-210ENST00000556380 CMASQ8NFW8 434 aaPredicted RBP10.4□□□□□ -0.74
SRP54-210ENST00000556380 ANKRD36BP1Q96IX9 119 aa10.4□□□□□ -0.74
SRP54-210ENST00000556380 MED15Q96RN5 788 aa10.4□□□□□ -0.74
SRP54-210ENST00000556380 FNBP1Q96RU3 617 aa10.4□□□□□ -0.74
SRP54-210ENST00000556380 DUSP9Q99956 384 aaKnown RBP10.4□□□□□ -0.74
SRP54-210ENST00000556380 RTP3Q9BQQ7 232 aa10.4□□□□□ -0.74
SRP54-210ENST00000556380 DZANK1Q9NVP4 752 aa10.4□□□□□ -0.74
SRP54-210ENST00000556380 GDAP2Q9NXN4 497 aa10.4□□□□□ -0.74
SRP54-210ENST00000556380 FBXL5Q9UKA1 691 aa10.4□□□□□ -0.74
SRP54-210ENST00000556380 TIMM13Q9Y5L4 95 aaPredicted RBP10.4□□□□□ -0.74
SRP54-210ENST00000556380 TRIM49BA6NDI0 452 aa10.39□□□□□ -0.75
SRP54-210ENST00000556380 H7C4K7 107 aa10.39□□□□□ -0.75
SRP54-210ENST00000556380 CYB561D2O14569 222 aa10.39□□□□□ -0.75
SRP54-210ENST00000556380 IKBKBO14920 756 aa10.39□□□□□ -0.75
SRP54-210ENST00000556380 GFRA3O60609 400 aa10.39□□□□□ -0.75
SRP54-210ENST00000556380 VNN1O95497 513 aa10.39□□□□□ -0.75
SRP54-210ENST00000556380 GLUD1P00367 558 aa10.39□□□□□ -0.75
SRP54-210ENST00000556380 TNNC2P02585 160 aa10.39□□□□□ -0.75
SRP54-210ENST00000556380 TMEM191BP0C7N4 346 aa10.39□□□□□ -0.75
SRP54-210ENST00000556380 SPATA31D3P0C874 917 aa10.39□□□□□ -0.75
SRP54-210ENST00000556380 TNNI1P19237 187 aa10.39□□□□□ -0.75
SRP54-210ENST00000556380 PSMC2P35998 433 aaKnown RBP10.39□□□□□ -0.75
SRP54-210ENST00000556380 PPP1R2P41236 205 aa10.39□□□□□ -0.75
SRP54-210ENST00000556380 AP3M2P53677 418 aa10.39□□□□□ -0.75
SRP54-210ENST00000556380 FKBP3Q00688 224 aaKnown RBP10.39□□□□□ -0.75
SRP54-210ENST00000556380 LRRC63Q05C16 580 aa10.39□□□□□ -0.75
SRP54-210ENST00000556380 SMAD2Q15796 467 aaKnown RBP10.39□□□□□ -0.75
SRP54-210ENST00000556380 ZACNQ401N2 412 aa10.39□□□□□ -0.75
SRP54-210ENST00000556380 WSCD1Q658N2 575 aa10.39□□□□□ -0.75
SRP54-210ENST00000556380 CEP135Q66GS9 1140 aa10.39□□□□□ -0.75
SRP54-210ENST00000556380 PTCRAQ6ISU1 281 aaPredicted RBP10.39□□□□□ -0.75
SRP54-210ENST00000556380 TTI2Q6NXR4 508 aa10.39□□□□□ -0.75
SRP54-210ENST00000556380 DSTYKQ6XUX3 929 aa10.39□□□□□ -0.75
SRP54-210ENST00000556380 SPATA31D4Q6ZUB0 917 aa10.39□□□□□ -0.75
SRP54-210ENST00000556380 METTL3Q86U44 580 aaKnown RBP10.39□□□□□ -0.75
SRP54-210ENST00000556380 EEF2KMTQ96G04 330 aa10.39□□□□□ -0.75
SRP54-210ENST00000556380 MKNK1Q9BUB5 465 aa10.39□□□□□ -0.75
SRP54-210ENST00000556380 RHOBTB2Q9BYZ6 727 aa10.39□□□□□ -0.75
SRP54-210ENST00000556380 XYLT2Q9H1B5 865 aa10.39□□□□□ -0.75
SRP54-210ENST00000556380 ADAM7Q9H2U9 754 aa10.39□□□□□ -0.75
SRP54-210ENST00000556380 PLEKHA4Q9H4M7 779 aa10.39□□□□□ -0.75
SRP54-210ENST00000556380 MAN1C1Q9NR34 630 aa10.39□□□□□ -0.75
SRP54-210ENST00000556380 FBXW11Q9UKB1 542 aa10.39□□□□□ -0.75
SRP54-210ENST00000556380 FRMD4BQ9Y2L6 1034 aa10.39□□□□□ -0.75
SRP54-210ENST00000556380 CDY1Q9Y6F8 540 aa10.39□□□□□ -0.75
SRP54-210ENST00000556380 MUC3AQ02505 3323 aa10.38□□□□□ -0.75
SRP54-210ENST00000556380 WDR27A2RRH5 827 aa10.38□□□□□ -0.75
SRP54-210ENST00000556380 PSMA7O14818 248 aa10.38□□□□□ -0.75
SRP54-210ENST00000556380 CETN3O15182 167 aa10.38□□□□□ -0.75
SRP54-210ENST00000556380 VNN2O95498 520 aa10.38□□□□□ -0.75
SRP54-210ENST00000556380 STAU1O95793 577 aaKnown RBP10.38□□□□□ -0.75
SRP54-210ENST00000556380 SRGAP2BP0DMP2 458 aa10.38□□□□□ -0.75
SRP54-210ENST00000556380 ODC1P11926 461 aa10.38□□□□□ -0.75
SRP54-210ENST00000556380 IL9P15248 144 aa10.38□□□□□ -0.75
SRP54-210ENST00000556380 VAMP7P51809 220 aa10.38□□□□□ -0.75
SRP54-210ENST00000556380 ROR1Q01973 937 aa10.38□□□□□ -0.75
SRP54-210ENST00000556380 YWHAHQ04917 246 aaPredicted RBP10.38□□□□□ -0.75
SRP54-210ENST00000556380 PPP3CAQ08209 521 aa10.38□□□□□ -0.75
SRP54-210ENST00000556380 LAPTM4AQ15012 233 aa10.38□□□□□ -0.75
SRP54-210ENST00000556380 SV2CQ496J9 727 aa10.38□□□□□ -0.75
SRP54-210ENST00000556380 CTXN3Q4LDR2 81 aa10.38□□□□□ -0.75
SRP54-210ENST00000556380 TDRD10Q5VZ19 366 aaKnown RBP10.38□□□□□ -0.75
SRP54-210ENST00000556380 OVOS1Q6IE37 1185 aa10.38□□□□□ -0.75
SRP54-210ENST00000556380 ZNF280DQ6N043 979 aa10.38□□□□□ -0.75
SRP54-210ENST00000556380 RBM43Q6ZSC3 357 aaKnown RBP10.38□□□□□ -0.75
SRP54-210ENST00000556380 INTS8Q75QN2 995 aaKnown RBP10.38□□□□□ -0.75
SRP54-210ENST00000556380 SV2AQ7L0J3 742 aa10.38□□□□□ -0.75
SRP54-210ENST00000556380 RTL10Q7L3V2 364 aa10.38□□□□□ -0.75
SRP54-210ENST00000556380 GPR149Q86SP6 731 aa10.38□□□□□ -0.75
SRP54-210ENST00000556380 GLYCTKQ8IVS8 523 aa10.38□□□□□ -0.75
SRP54-210ENST00000556380 FAM186BQ8IYM0 893 aa10.38□□□□□ -0.75
SRP54-210ENST00000556380 PDCL2Q8N4E4 241 aa10.38□□□□□ -0.75
SRP54-210ENST00000556380 KREMEN2Q8NCW0 462 aa10.38□□□□□ -0.75
SRP54-210ENST00000556380 ZNF461Q8TAF7 563 aa10.38□□□□□ -0.75
SRP54-210ENST00000556380 NELFBQ8WX92 580 aa10.38□□□□□ -0.75
SRP54-210ENST00000556380 ZNF707Q96C28 371 aaPredicted RBP10.38□□□□□ -0.75
SRP54-210ENST00000556380 HPDLQ96IR7 371 aa10.38□□□□□ -0.75
SRP54-210ENST00000556380 ZNF560Q96MR9 790 aa10.38□□□□□ -0.75
SRP54-210ENST00000556380 TMUB1Q9BVT8 246 aa10.38□□□□□ -0.75
SRP54-210ENST00000556380 OXCT2Q9BYC2 517 aaPredicted RBP10.38□□□□□ -0.75
SRP54-210ENST00000556380 NUP62CLQ9H1M0 184 aa10.38□□□□□ -0.75
SRP54-210ENST00000556380 VRTNQ9H8Y1 702 aa10.38□□□□□ -0.75
SRP54-210ENST00000556380 CDH22Q9UJ99 828 aa10.38□□□□□ -0.75
SRP54-210ENST00000556380 L1RE1Q9UN81 338 aa10.38□□□□□ -0.75
SRP54-210ENST00000556380 USP15Q9Y4E8 981 aaPredicted RBP10.38□□□□□ -0.75
SRP54-210ENST00000556380 ARHGEF37A1IGU5 675 aa10.37□□□□□ -0.75
SRP54-210ENST00000556380 OR6C75A6NL08 312 aa10.37□□□□□ -0.75
SRP54-210ENST00000556380 GOLGA6L22H0YM25 854 aa10.37□□□□□ -0.75
SRP54-210ENST00000556380 TULP1O00294 542 aaPredicted RBP10.37□□□□□ -0.75
SRP54-210ENST00000556380 GABRDO14764 452 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms