RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 TIGD1Q96MW7 591 aa12.43□□□□□ -0.42
SLIRP-205ENST00000556310 FNBP1Q96RU3 617 aa12.43□□□□□ -0.42
SLIRP-205ENST00000556310 CGRRF1Q99675 332 aa12.43□□□□□ -0.42
SLIRP-205ENST00000556310 CHMP5Q9NZZ3 219 aa12.43□□□□□ -0.42
SLIRP-205ENST00000556310 SIX4Q9UIU6 781 aa12.43□□□□□ -0.42
SLIRP-205ENST00000556310 AGAP1Q9UPQ3 857 aa12.43□□□□□ -0.42
SLIRP-205ENST00000556310 TECTAO75443 2155 aa12.43□□□□□ -0.42
SLIRP-205ENST00000556310 PRRG1O14668 218 aa12.42□□□□□ -0.42
SLIRP-205ENST00000556310 CCL16O15467 120 aa12.42□□□□□ -0.42
SLIRP-205ENST00000556310 LRG1P02750 347 aa12.42□□□□□ -0.42
SLIRP-205ENST00000556310 NR3C1P04150 777 aa12.42□□□□□ -0.42
SLIRP-205ENST00000556310 KRT19P08727 400 aa12.42□□□□□ -0.42
SLIRP-205ENST00000556310 DLATP10515 647 aaKnown RBP12.42□□□□□ -0.42
SLIRP-205ENST00000556310 RBP5P82980 135 aa12.42□□□□□ -0.42
SLIRP-205ENST00000556310 BFSP1Q12934 665 aa12.42□□□□□ -0.42
SLIRP-205ENST00000556310 PNOCQ13519 176 aa12.42□□□□□ -0.42
SLIRP-205ENST00000556310 PTPN21Q16825 1174 aa12.42□□□□□ -0.42
SLIRP-205ENST00000556310 GRASPQ7Z6J2 395 aaPredicted RBP12.42□□□□□ -0.42
SLIRP-205ENST00000556310 METTL23Q86XA0 190 aa12.42□□□□□ -0.42
SLIRP-205ENST00000556310 GUF1Q8N442 669 aaKnown RBP12.42□□□□□ -0.42
SLIRP-205ENST00000556310 CSGALNACT2Q8N6G5 542 aa12.42□□□□□ -0.42
SLIRP-205ENST00000556310 ZDHHC16Q969W1 377 aa12.42□□□□□ -0.42
SLIRP-205ENST00000556310 MFSD14AQ96MC6 490 aa12.42□□□□□ -0.42
SLIRP-205ENST00000556310 CYP4F11Q9HBI6 524 aa12.42□□□□□ -0.42
SLIRP-205ENST00000556310 DMAC2Q9NW81 257 aa12.42□□□□□ -0.42
SLIRP-205ENST00000556310 RMND1Q9NWS8 449 aa12.42□□□□□ -0.42
SLIRP-205ENST00000556310 GDAP2Q9NXN4 497 aa12.42□□□□□ -0.42
SLIRP-205ENST00000556310 HOOK1Q9UJC3 728 aaKnown RBP12.42□□□□□ -0.42
SLIRP-205ENST00000556310 TRAF3IP3Q9Y228 551 aa12.42□□□□□ -0.42
SLIRP-205ENST00000556310 R3HCC1Q9Y3T6 440 aaKnown RBP12.42□□□□□ -0.42
SLIRP-205ENST00000556310 INSL5Q9Y5Q6 135 aa12.42□□□□□ -0.42
SLIRP-205ENST00000556310 CALUO43852 315 aaPredicted RBP12.41□□□□□ -0.42
SLIRP-205ENST00000556310 GPR37L1O60883 481 aa12.41□□□□□ -0.42
SLIRP-205ENST00000556310 N4BP1O75113 896 aaKnown RBP12.41□□□□□ -0.42
SLIRP-205ENST00000556310 SEC24AO95486 1093 aa12.41□□□□□ -0.42
SLIRP-205ENST00000556310 OR4Q2P0C623 313 aa12.41□□□□□ -0.42
SLIRP-205ENST00000556310 TNNI1P19237 187 aa12.41□□□□□ -0.42
SLIRP-205ENST00000556310 GBP2P32456 591 aaPredicted RBP12.41□□□□□ -0.42
SLIRP-205ENST00000556310 ADCY1Q08828 1119 aa12.41□□□□□ -0.42
SLIRP-205ENST00000556310 MYO1EQ12965 1108 aa12.41□□□□□ -0.42
SLIRP-205ENST00000556310 GPR17Q13304 367 aa12.41□□□□□ -0.42
SLIRP-205ENST00000556310 NFIL3Q16649 462 aa12.41□□□□□ -0.42
SLIRP-205ENST00000556310 WSCD1Q658N2 575 aa12.41□□□□□ -0.42
SLIRP-205ENST00000556310 RNF19BQ6ZMZ0 732 aa12.41□□□□□ -0.42
SLIRP-205ENST00000556310 GET4Q7L5D6 327 aaPredicted RBP12.41□□□□□ -0.42
SLIRP-205ENST00000556310 TRAPPC11Q7Z392 1133 aa12.41□□□□□ -0.42
SLIRP-205ENST00000556310 OR10T2Q8NGX3 314 aa12.41□□□□□ -0.42
SLIRP-205ENST00000556310 SPATA18Q8TC71 538 aa12.41□□□□□ -0.42
SLIRP-205ENST00000556310 CCDC127Q96BQ5 260 aa12.41□□□□□ -0.42
SLIRP-205ENST00000556310 GSDMAQ96QA5 445 aa12.41□□□□□ -0.42
SLIRP-205ENST00000556310 GZF1Q9H116 711 aaPredicted RBP12.41□□□□□ -0.42
SLIRP-205ENST00000556310 C11orf16Q9NQ32 467 aa12.41□□□□□ -0.42
SLIRP-205ENST00000556310 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.41□□□□□ -0.42
SLIRP-205ENST00000556310 EPS15L1Q9UBC2 864 aa12.41□□□□□ -0.42
SLIRP-205ENST00000556310 L1RE1Q9UN81 338 aa12.41□□□□□ -0.42
SLIRP-205ENST00000556310 POLIQ9UNA4 740 aa12.41□□□□□ -0.42
SLIRP-205ENST00000556310 MTMR11A4FU01 709 aa12.4□□□□□ -0.42
SLIRP-205ENST00000556310 KINO60870 393 aaKnown RBP12.4□□□□□ -0.42
SLIRP-205ENST00000556310 HUS1O60921 280 aa12.4□□□□□ -0.42
SLIRP-205ENST00000556310 SMC2O95347 1197 aa12.4□□□□□ -0.42
SLIRP-205ENST00000556310 VNN2O95498 520 aa12.4□□□□□ -0.42
SLIRP-205ENST00000556310 FSHRP23945 695 aa12.4□□□□□ -0.42
SLIRP-205ENST00000556310 NTHL1P78549 312 aa12.4□□□□□ -0.42
SLIRP-205ENST00000556310 ZXDAP98168 799 aa12.4□□□□□ -0.42
SLIRP-205ENST00000556310 MTMR3Q13615 1198 aa12.4□□□□□ -0.42
SLIRP-205ENST00000556310 PABPC1LQ4VXU2 614 aaKnown RBP12.4□□□□□ -0.42
SLIRP-205ENST00000556310 ZCWPW2Q504Y3 356 aa12.4□□□□□ -0.42
SLIRP-205ENST00000556310 TMEM31Q5JXX7 168 aa12.4□□□□□ -0.42
SLIRP-205ENST00000556310 ELOA2Q8IYF1 753 aaPredicted RBP12.4□□□□□ -0.42
SLIRP-205ENST00000556310 THEM5Q8N1Q8 247 aa12.4□□□□□ -0.42
SLIRP-205ENST00000556310 TMEM86AQ8N2M4 240 aa12.4□□□□□ -0.42
SLIRP-205ENST00000556310 PDCL2Q8N4E4 241 aa12.4□□□□□ -0.42
SLIRP-205ENST00000556310 SPATA20Q8TB22 786 aa12.4□□□□□ -0.42
SLIRP-205ENST00000556310 PLEKHO2Q8TD55 490 aa12.4□□□□□ -0.42
SLIRP-205ENST00000556310 EDAQ92838 391 aa12.4□□□□□ -0.42
SLIRP-205ENST00000556310 HPDLQ96IR7 371 aa12.4□□□□□ -0.42
SLIRP-205ENST00000556310 PGLYRP2Q96PD5 576 aa12.4□□□□□ -0.42
SLIRP-205ENST00000556310 MYADMQ96S97 322 aa12.4□□□□□ -0.42
SLIRP-205ENST00000556310 TMEM209Q96SK2 561 aa12.4□□□□□ -0.42
SLIRP-205ENST00000556310 RTP3Q9BQQ7 232 aa12.4□□□□□ -0.42
SLIRP-205ENST00000556310 ZCWPW1Q9H0M4 648 aa12.4□□□□□ -0.42
SLIRP-205ENST00000556310 AVENQ9NQS1 362 aaPredicted RBP12.4□□□□□ -0.42
SLIRP-205ENST00000556310 HCFC1R1Q9NWW0 138 aa12.4□□□□□ -0.42
SLIRP-205ENST00000556310 DNMT3BQ9UBC3 853 aaKnown RBP12.4□□□□□ -0.42
SLIRP-205ENST00000556310 SORCS3Q9UPU3 1222 aa12.4□□□□□ -0.42
SLIRP-205ENST00000556310 YIPF1Q9Y548 306 aa12.4□□□□□ -0.42
SLIRP-205ENST00000556310 SNX9Q9Y5X1 595 aa12.4□□□□□ -0.42
SLIRP-205ENST00000556310 ZFP37Q9Y6Q3 630 aaPredicted RBP12.4□□□□□ -0.42
SLIRP-205ENST00000556310 FAM86C2PA6NEL3 165 aa12.39□□□□□ -0.43
SLIRP-205ENST00000556310 LRRIQ3A6PVS8 624 aaPredicted RBP12.39□□□□□ -0.43
SLIRP-205ENST00000556310 MAPK13O15264 365 aa12.39□□□□□ -0.43
SLIRP-205ENST00000556310 GADD45BO75293 160 aaPredicted RBP12.39□□□□□ -0.43
SLIRP-205ENST00000556310 ASGR2P07307 311 aa12.39□□□□□ -0.43
SLIRP-205ENST00000556310 RHOP08100 348 aa12.39□□□□□ -0.43
SLIRP-205ENST00000556310 NR2F2P24468 414 aa12.39□□□□□ -0.43
SLIRP-205ENST00000556310 CASP4P49662 377 aa12.39□□□□□ -0.43
SLIRP-205ENST00000556310 AP3M2P53677 418 aa12.39□□□□□ -0.43
SLIRP-205ENST00000556310 CLDN10P78369 228 aa12.39□□□□□ -0.43
SLIRP-205ENST00000556310 TWF1Q12792 350 aa12.39□□□□□ -0.43
SLIRP-205ENST00000556310 SMARCB1Q12824 385 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms