RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 CD302Q8IX05 232 aa14.39□□□□□ -0.11
TGFB3-204ENST00000556285 EFCAB13Q8IY85 973 aa14.39□□□□□ -0.11
TGFB3-204ENST00000556285 LEMD2Q8NC56 503 aa14.39□□□□□ -0.11
TGFB3-204ENST00000556285 ZSWIM2Q8NEG5 633 aa14.39□□□□□ -0.11
TGFB3-204ENST00000556285 IRF7Q92985 503 aa14.39□□□□□ -0.11
TGFB3-204ENST00000556285 FAM84AQ96KN4 292 aa14.39□□□□□ -0.11
TGFB3-204ENST00000556285 LPIN3Q9BQK8 851 aa14.39□□□□□ -0.11
TGFB3-204ENST00000556285 C2orf42Q9NWW7 574 aa14.39□□□□□ -0.11
TGFB3-204ENST00000556285 FBXO2Q9UK22 296 aaPredicted RBP14.39□□□□□ -0.11
TGFB3-204ENST00000556285 AGO2Q9UKV8 859 aaKnown RBP14.39□□□□□ -0.11
TGFB3-204ENST00000556285 MRPS17Q9Y2R5 130 aaKnown RBP14.39□□□□□ -0.11
TGFB3-204ENST00000556285 STYXL1Q9Y6J8 313 aa14.39□□□□□ -0.11
TGFB3-204ENST00000556285 PIAS3Q9Y6X2 628 aa14.39□□□□□ -0.11
TGFB3-204ENST00000556285 NCOR2Q9Y618 2525 aa14.38□□□□□ -0.11
TGFB3-204ENST00000556285 ZNF263O14978 683 aa14.38□□□□□ -0.11
TGFB3-204ENST00000556285 PPP1R37O75864 691 aa14.38□□□□□ -0.11
TGFB3-204ENST00000556285 SCP2P22307 547 aa14.38□□□□□ -0.11
TGFB3-204ENST00000556285 CCNE1P24864 410 aa14.38□□□□□ -0.11
TGFB3-204ENST00000556285 ALDH1A3P47895 512 aa14.38□□□□□ -0.11
TGFB3-204ENST00000556285 SOX9P48436 509 aa14.38□□□□□ -0.11
TGFB3-204ENST00000556285 RESTQ13127 1097 aa14.38□□□□□ -0.11
TGFB3-204ENST00000556285 CUL4AQ13619 759 aa14.38□□□□□ -0.11
TGFB3-204ENST00000556285 LPAL2Q16609 132 aa14.38□□□□□ -0.11
TGFB3-204ENST00000556285 SLC39A12Q504Y0 691 aa14.38□□□□□ -0.11
TGFB3-204ENST00000556285 ZNF720Q7Z2F6 126 aa14.38□□□□□ -0.11
TGFB3-204ENST00000556285 LRRTM3Q86VH5 581 aa14.38□□□□□ -0.11
TGFB3-204ENST00000556285 ARID3BQ8IVW6 561 aaPredicted RBP14.38□□□□□ -0.11
TGFB3-204ENST00000556285 MFSD6LQ8IWD5 586 aa14.38□□□□□ -0.11
TGFB3-204ENST00000556285 TTC8Q8TAM2 541 aa14.38□□□□□ -0.11
TGFB3-204ENST00000556285 FAM3CQ92520 227 aa14.38□□□□□ -0.11
TGFB3-204ENST00000556285 BORCS6Q96GS4 357 aa14.38□□□□□ -0.11
TGFB3-204ENST00000556285 TSPAN18Q96SJ8 248 aa14.38□□□□□ -0.11
TGFB3-204ENST00000556285 OXCT2Q9BYC2 517 aaPredicted RBP14.38□□□□□ -0.11
TGFB3-204ENST00000556285 ST6GALNAC4Q9H4F1 302 aa14.38□□□□□ -0.11
TGFB3-204ENST00000556285 LMAN1LQ9HAT1 526 aa14.38□□□□□ -0.11
TGFB3-204ENST00000556285 UPF2Q9HAU5 1272 aaKnown RBP14.38□□□□□ -0.11
TGFB3-204ENST00000556285 TRPV5Q9NQA5 729 aa14.38□□□□□ -0.11
TGFB3-204ENST00000556285 TBC1D7Q9P0N9 293 aa14.38□□□□□ -0.11
TGFB3-204ENST00000556285 SMG5Q9UPR3 1016 aaKnown RBP14.38□□□□□ -0.11
TGFB3-204ENST00000556285 KIAA1549LQ6ZVL6 1849 aa14.38□□□□□ -0.11
TGFB3-204ENST00000556285 SLC38A8A6NNN8 435 aa14.37□□□□□ -0.11
TGFB3-204ENST00000556285 MAN2B1O00754 1011 aa14.37□□□□□ -0.11
TGFB3-204ENST00000556285 CYB561D2O14569 222 aa14.37□□□□□ -0.11
TGFB3-204ENST00000556285 NCAM2O15394 837 aa14.37□□□□□ -0.11
TGFB3-204ENST00000556285 CYP11A1P05108 521 aa14.37□□□□□ -0.11
TGFB3-204ENST00000556285 ATF6P18850 670 aa14.37□□□□□ -0.11
TGFB3-204ENST00000556285 MAGEA9P43362 315 aa14.37□□□□□ -0.11
TGFB3-204ENST00000556285 CYP4F8P98187 520 aa14.37□□□□□ -0.11
TGFB3-204ENST00000556285 CEBPZQ03701 1054 aaKnown RBP14.37□□□□□ -0.11
TGFB3-204ENST00000556285 PLD1Q13393 1074 aa14.37□□□□□ -0.11
TGFB3-204ENST00000556285 PUM1Q14671 1186 aaKnown RBP eCLIP14.37□□□□□ -0.11
TGFB3-204ENST00000556285 WSCD1Q658N2 575 aa14.37□□□□□ -0.11
TGFB3-204ENST00000556285 ARMCX5Q6P1M9 558 aa14.37□□□□□ -0.11
TGFB3-204ENST00000556285 KRI1Q8N9T8 703 aaKnown RBP14.37□□□□□ -0.11
TGFB3-204ENST00000556285 DEPDC1BQ8WUY9 529 aa14.37□□□□□ -0.11
TGFB3-204ENST00000556285 ATRIPQ8WXE1 791 aa14.37□□□□□ -0.11
TGFB3-204ENST00000556285 PSMG2Q969U7 264 aa14.37□□□□□ -0.11
TGFB3-204ENST00000556285 DNAJC19Q96DA6 116 aa14.37□□□□□ -0.11
TGFB3-204ENST00000556285 ZFYVE19Q96K21 471 aa14.37□□□□□ -0.11
TGFB3-204ENST00000556285 SEPT5Q99719 369 aaPredicted RBP14.37□□□□□ -0.11
TGFB3-204ENST00000556285 PYM1Q9BRP8 204 aaKnown RBP14.37□□□□□ -0.11
TGFB3-204ENST00000556285 STRA6Q9BX79 667 aa14.37□□□□□ -0.11
TGFB3-204ENST00000556285 FGFBP2Q9BYJ0 223 aa14.37□□□□□ -0.11
TGFB3-204ENST00000556285 ZCWPW1Q9H0M4 648 aa14.37□□□□□ -0.11
TGFB3-204ENST00000556285 EPC1Q9H2F5 836 aa14.37□□□□□ -0.11
TGFB3-204ENST00000556285 CHRDQ9H2X0 955 aa14.37□□□□□ -0.11
TGFB3-204ENST00000556285 ATXN3LQ9H3M9 355 aa14.37□□□□□ -0.11
TGFB3-204ENST00000556285 ASB7Q9H672 318 aa14.37□□□□□ -0.11
TGFB3-204ENST00000556285 ZSCAN32Q9NX65 697 aa14.37□□□□□ -0.11
TGFB3-204ENST00000556285 DPP3Q9NY33 737 aa14.37□□□□□ -0.11
TGFB3-204ENST00000556285 DERAQ9Y315 318 aa14.37□□□□□ -0.11
TGFB3-204ENST00000556285 PCDHGA2Q9Y5H1 932 aa14.37□□□□□ -0.11
TGFB3-204ENST00000556285 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.37□□□□□ -0.11
TGFB3-204ENST00000556285 TULP1O00294 542 aaPredicted RBP14.36□□□□□ -0.11
TGFB3-204ENST00000556285 PRAMEF12O95522 483 aa14.36□□□□□ -0.11
TGFB3-204ENST00000556285 CHRNB1P11230 501 aa14.36□□□□□ -0.11
TGFB3-204ENST00000556285 GABRR2P28476 465 aa14.36□□□□□ -0.11
TGFB3-204ENST00000556285 CASP5P51878 434 aa14.36□□□□□ -0.11
TGFB3-204ENST00000556285 ATXN1P54253 815 aaKnown RBP14.36□□□□□ -0.11
TGFB3-204ENST00000556285 SATB1Q01826 763 aa14.36□□□□□ -0.11
TGFB3-204ENST00000556285 GPR158Q5T848 1215 aa14.36□□□□□ -0.11
TGFB3-204ENST00000556285 SLFN12LQ6IEE8 588 aa14.36□□□□□ -0.11
TGFB3-204ENST00000556285 TXNDC11Q6PKC3 985 aa14.36□□□□□ -0.11
TGFB3-204ENST00000556285 STKLD1Q8NE28 680 aa14.36□□□□□ -0.11
TGFB3-204ENST00000556285 GIPC2Q8TF65 315 aa14.36□□□□□ -0.11
TGFB3-204ENST00000556285 POMGNT1Q8WZA1 660 aa14.36□□□□□ -0.11
TGFB3-204ENST00000556285 PANK2Q9BZ23 570 aa14.36□□□□□ -0.11
TGFB3-204ENST00000556285 GPR88Q9GZN0 384 aa14.36□□□□□ -0.11
TGFB3-204ENST00000556285 SMG9Q9H0W8 520 aaKnown RBP14.36□□□□□ -0.11
TGFB3-204ENST00000556285 IL21Q9HBE4 155 aa14.36□□□□□ -0.11
TGFB3-204ENST00000556285 RBM12Q9NTZ6 932 aaKnown RBP14.36□□□□□ -0.11
TGFB3-204ENST00000556285 TMLHEQ9NVH6 421 aa14.36□□□□□ -0.11
TGFB3-204ENST00000556285 NCDNQ9UBB6 729 aa14.36□□□□□ -0.11
TGFB3-204ENST00000556285 C2CD2Q9Y426 696 aa14.36□□□□□ -0.11
TGFB3-204ENST00000556285 SRPRBQ9Y5M8 271 aaKnown RBP14.36□□□□□ -0.11
TGFB3-204ENST00000556285 GREB1Q4ZG55 1949 aa14.36□□□□□ -0.11
TGFB3-204ENST00000556285 SPTBN2O15020 2390 aa14.36□□□□□ -0.11
TGFB3-204ENST00000556285 A0A087X0B3 334 aa14.35□□□□□ -0.11
TGFB3-204ENST00000556285 CHADO15335 359 aa14.35□□□□□ -0.11
TGFB3-204ENST00000556285 TAF6P49848 677 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms