RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 TMEM150AQ86TG1 271 aa15.58■□□□□ 0.08
CHMP4BP1-201ENST00000556017 SPEM1Q8N4L4 309 aa15.58■□□□□ 0.08
CHMP4BP1-201ENST00000556017 CELF5Q8N6W0 485 aaKnown RBP15.58■□□□□ 0.08
CHMP4BP1-201ENST00000556017 TTC8Q8TAM2 541 aa15.58■□□□□ 0.08
CHMP4BP1-201ENST00000556017 RIN3Q8TB24 985 aa15.58■□□□□ 0.08
CHMP4BP1-201ENST00000556017 E2F7Q96AV8 911 aa15.58■□□□□ 0.08
CHMP4BP1-201ENST00000556017 CNTNAP3BQ96NU0 1288 aa15.58■□□□□ 0.08
CHMP4BP1-201ENST00000556017 LPIN3Q9BQK8 851 aa15.58■□□□□ 0.08
CHMP4BP1-201ENST00000556017 CNTNAP3Q9BZ76 1288 aa15.58■□□□□ 0.08
CHMP4BP1-201ENST00000556017 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.58■□□□□ 0.08
CHMP4BP1-201ENST00000556017 KIAA1549LQ6ZVL6 1849 aa15.58■□□□□ 0.08
CHMP4BP1-201ENST00000556017 ANAPC1Q9H1A4 1944 aa15.58■□□□□ 0.08
CHMP4BP1-201ENST00000556017 PRR5-ARHGAP8B1AHC4 643 aa15.57■□□□□ 0.08
CHMP4BP1-201ENST00000556017 SPECC1L-ADORA2AF8WAN1 911 aa15.57■□□□□ 0.08
CHMP4BP1-201ENST00000556017 HNRNPDLO14979 420 aaKnown RBP15.57■□□□□ 0.08
CHMP4BP1-201ENST00000556017 EIF5BO60841 1220 aaKnown RBP15.57■□□□□ 0.08
CHMP4BP1-201ENST00000556017 WEE1P30291 646 aa15.57■□□□□ 0.08
CHMP4BP1-201ENST00000556017 NMT1P30419 496 aaKnown RBP15.57■□□□□ 0.08
CHMP4BP1-201ENST00000556017 LIG4P49917 911 aa15.57■□□□□ 0.08
CHMP4BP1-201ENST00000556017 NRLP54845 237 aa15.57■□□□□ 0.08
CHMP4BP1-201ENST00000556017 WNT7BP56706 349 aa15.57■□□□□ 0.08
CHMP4BP1-201ENST00000556017 ARHGAP8P85298 464 aa15.57■□□□□ 0.08
CHMP4BP1-201ENST00000556017 GTF2BQ00403 316 aa15.57■□□□□ 0.08
CHMP4BP1-201ENST00000556017 LMNB2Q03252 620 aa15.57■□□□□ 0.08
CHMP4BP1-201ENST00000556017 MCM6Q14566 821 aa15.57■□□□□ 0.08
CHMP4BP1-201ENST00000556017 ERICH6BQ5W0A0 696 aa15.57■□□□□ 0.08
CHMP4BP1-201ENST00000556017 MCTP1Q6DN14 999 aa15.57■□□□□ 0.08
CHMP4BP1-201ENST00000556017 LAIR1Q6GTX8 287 aa15.57■□□□□ 0.08
CHMP4BP1-201ENST00000556017 CRELD2Q6UXH1 353 aaPredicted RBP15.57■□□□□ 0.08
CHMP4BP1-201ENST00000556017 DSTYKQ6XUX3 929 aa15.57■□□□□ 0.08
CHMP4BP1-201ENST00000556017 USP37Q86T82 979 aa15.57■□□□□ 0.08
CHMP4BP1-201ENST00000556017 GPBP1Q86WP2 473 aa15.57■□□□□ 0.08
CHMP4BP1-201ENST00000556017 BICD1Q96G01 975 aa15.57■□□□□ 0.08
CHMP4BP1-201ENST00000556017 TSPAN18Q96SJ8 248 aa15.57■□□□□ 0.08
CHMP4BP1-201ENST00000556017 ZCWPW1Q9H0M4 648 aa15.57■□□□□ 0.08
CHMP4BP1-201ENST00000556017 SLITRK6Q9H5Y7 841 aa15.57■□□□□ 0.08
CHMP4BP1-201ENST00000556017 RPF1Q9H9Y2 349 aaKnown RBP15.57■□□□□ 0.08
CHMP4BP1-201ENST00000556017 HSFX1Q9UBD0 423 aa15.57■□□□□ 0.08
CHMP4BP1-201ENST00000556017 ASB3Q9Y575 518 aa15.57■□□□□ 0.08
CHMP4BP1-201ENST00000556017 STYXL1Q9Y6J8 313 aa15.57■□□□□ 0.08
CHMP4BP1-201ENST00000556017 OTOL1A6NHN0 477 aaPredicted RBP15.56■□□□□ 0.08
CHMP4BP1-201ENST00000556017 PLCG1P19174 1290 aa15.56■□□□□ 0.08
CHMP4BP1-201ENST00000556017 GABRR2P28476 465 aa15.56■□□□□ 0.08
CHMP4BP1-201ENST00000556017 MATR3P43243 847 aaKnown RBP eCLIP15.56■□□□□ 0.08
CHMP4BP1-201ENST00000556017 ALDH1A3P47895 512 aa15.56■□□□□ 0.08
CHMP4BP1-201ENST00000556017 ACOT2P49753 483 aa15.56■□□□□ 0.08
CHMP4BP1-201ENST00000556017 CYP4F8P98187 520 aa15.56■□□□□ 0.08
CHMP4BP1-201ENST00000556017 PLD1Q13393 1074 aa15.56■□□□□ 0.08
CHMP4BP1-201ENST00000556017 KYAT1Q16773 422 aa15.56■□□□□ 0.08
CHMP4BP1-201ENST00000556017 ZC2HC1CQ53FD0 456 aaPredicted RBP15.56■□□□□ 0.08
CHMP4BP1-201ENST00000556017 RALGPS2Q86X27 583 aaPredicted RBP15.56■□□□□ 0.08
CHMP4BP1-201ENST00000556017 EFCAB13Q8IY85 973 aa15.56■□□□□ 0.08
CHMP4BP1-201ENST00000556017 TMX3Q96JJ7 454 aa15.56■□□□□ 0.08
CHMP4BP1-201ENST00000556017 AK8Q96MA6 479 aa15.56■□□□□ 0.08
CHMP4BP1-201ENST00000556017 MSTO1Q9BUK6 570 aa15.56■□□□□ 0.08
CHMP4BP1-201ENST00000556017 SLC46A2Q9BY10 475 aa15.56■□□□□ 0.08
CHMP4BP1-201ENST00000556017 SMG9Q9H0W8 520 aaKnown RBP15.56■□□□□ 0.08
CHMP4BP1-201ENST00000556017 C8orf33Q9H7E9 229 aaPredicted RBP15.56■□□□□ 0.08
CHMP4BP1-201ENST00000556017 OBP2AQ9NY56 170 aa15.56■□□□□ 0.08
CHMP4BP1-201ENST00000556017 USP18Q9UMW8 372 aa15.56■□□□□ 0.08
CHMP4BP1-201ENST00000556017 H0YCG3 227 aa15.55■□□□□ 0.08
CHMP4BP1-201ENST00000556017 K7ENM7 598 aa15.55■□□□□ 0.08
CHMP4BP1-201ENST00000556017 TRAK2O60296 914 aa15.55■□□□□ 0.08
CHMP4BP1-201ENST00000556017 RETP07949 1114 aa15.55■□□□□ 0.08
CHMP4BP1-201ENST00000556017 ODC1P11926 461 aa15.55■□□□□ 0.08
CHMP4BP1-201ENST00000556017 HMGA1P17096 107 aaKnown RBP15.55■□□□□ 0.08
CHMP4BP1-201ENST00000556017 GJB2P29033 226 aa15.55■□□□□ 0.08
CHMP4BP1-201ENST00000556017 ADSSP30520 456 aa15.55■□□□□ 0.08
CHMP4BP1-201ENST00000556017 HOXA6P31267 233 aa15.55■□□□□ 0.08
CHMP4BP1-201ENST00000556017 DHX8Q14562 1220 aaKnown RBP15.55■□□□□ 0.08
CHMP4BP1-201ENST00000556017 KARSQ15046 597 aaKnown RBP15.55■□□□□ 0.08
CHMP4BP1-201ENST00000556017 PON2Q15165 354 aa15.55■□□□□ 0.08
CHMP4BP1-201ENST00000556017 SLC39A12Q504Y0 691 aa15.55■□□□□ 0.08
CHMP4BP1-201ENST00000556017 ARHGAP29Q52LW3 1261 aa15.55■□□□□ 0.08
CHMP4BP1-201ENST00000556017 GPR158Q5T848 1215 aa15.55■□□□□ 0.08
CHMP4BP1-201ENST00000556017 USP49Q70CQ1 688 aa15.55■□□□□ 0.08
CHMP4BP1-201ENST00000556017 MYCT1Q8N699 235 aa15.55■□□□□ 0.08
CHMP4BP1-201ENST00000556017 ZSWIM2Q8NEG5 633 aa15.55■□□□□ 0.08
CHMP4BP1-201ENST00000556017 CSGALNACT1Q8TDX6 532 aa15.55■□□□□ 0.08
CHMP4BP1-201ENST00000556017 MSANTD3Q96H12 275 aa15.55■□□□□ 0.08
CHMP4BP1-201ENST00000556017 FAM83CQ9BQN1 747 aa15.55■□□□□ 0.08
CHMP4BP1-201ENST00000556017 RTKNQ9BST9 563 aa15.55■□□□□ 0.08
CHMP4BP1-201ENST00000556017 STRA6Q9BX79 667 aa15.55■□□□□ 0.08
CHMP4BP1-201ENST00000556017 CCSER1Q9C0I3 900 aa15.55■□□□□ 0.08
CHMP4BP1-201ENST00000556017 ATXN3LQ9H3M9 355 aa15.55■□□□□ 0.08
CHMP4BP1-201ENST00000556017 TASP1Q9H6P5 420 aa15.55■□□□□ 0.08
CHMP4BP1-201ENST00000556017 PARVGQ9HBI0 331 aa15.55■□□□□ 0.08
CHMP4BP1-201ENST00000556017 HPS4Q9NQG7 708 aa15.55■□□□□ 0.08
CHMP4BP1-201ENST00000556017 TMLHEQ9NVH6 421 aa15.55■□□□□ 0.08
CHMP4BP1-201ENST00000556017 CDV3Q9UKY7 258 aaKnown RBP15.55■□□□□ 0.08
CHMP4BP1-201ENST00000556017 DERAQ9Y315 318 aa15.55■□□□□ 0.08
CHMP4BP1-201ENST00000556017 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.55■□□□□ 0.08
CHMP4BP1-201ENST00000556017 SLC26A4O43511 780 aa15.54■□□□□ 0.08
CHMP4BP1-201ENST00000556017 XPOTO43592 962 aaKnown RBP15.54■□□□□ 0.08
CHMP4BP1-201ENST00000556017 GDF9O60383 454 aa15.54■□□□□ 0.08
CHMP4BP1-201ENST00000556017 LRP3O75074 770 aa15.54■□□□□ 0.08
CHMP4BP1-201ENST00000556017 PPP1R37O75864 691 aa15.54■□□□□ 0.08
CHMP4BP1-201ENST00000556017 SDHBP21912 280 aa15.54■□□□□ 0.08
CHMP4BP1-201ENST00000556017 TMEM132DQ14C87 1099 aa15.54■□□□□ 0.08
CHMP4BP1-201ENST00000556017 WSCD1Q658N2 575 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms