RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 CASQ1P31415 396 aa7.37□□□□□ -1.23
SLIRP-204ENST00000555890 HNRNPH3P31942 346 aaKnown RBP7.37□□□□□ -1.23
SLIRP-204ENST00000555890 NPTX2P47972 431 aa7.37□□□□□ -1.23
SLIRP-204ENST00000555890 CASP4P49662 377 aa7.37□□□□□ -1.23
SLIRP-204ENST00000555890 CYP2J2P51589 502 aa7.37□□□□□ -1.23
SLIRP-204ENST00000555890 KCNMA1Q12791 1236 aa7.37□□□□□ -1.23
SLIRP-204ENST00000555890 CETN1Q12798 172 aa7.37□□□□□ -1.23
SLIRP-204ENST00000555890 MTF1Q14872 753 aa7.37□□□□□ -1.23
SLIRP-204ENST00000555890 SPA17Q15506 151 aa7.37□□□□□ -1.23
SLIRP-204ENST00000555890 KCNA10Q16322 511 aa7.37□□□□□ -1.23
SLIRP-204ENST00000555890 MEA1Q16626 185 aa7.37□□□□□ -1.23
SLIRP-204ENST00000555890 COL28A1Q2UY09 1125 aa7.37□□□□□ -1.23
SLIRP-204ENST00000555890 MTERF2Q49AM1 385 aa7.37□□□□□ -1.23
SLIRP-204ENST00000555890 ARHGAP29Q52LW3 1261 aa7.37□□□□□ -1.23
SLIRP-204ENST00000555890 DCAF17Q5H9S7 520 aaPredicted RBP7.37□□□□□ -1.23
SLIRP-204ENST00000555890 CELF3Q5SZQ8 465 aaKnown RBP7.37□□□□□ -1.23
SLIRP-204ENST00000555890 SFMBT2Q5VUG0 894 aa7.37□□□□□ -1.23
SLIRP-204ENST00000555890 PDXDC1Q6P996 788 aa7.37□□□□□ -1.23
SLIRP-204ENST00000555890 SYT10Q6XYQ8 523 aa7.37□□□□□ -1.23
SLIRP-204ENST00000555890 INTS8Q75QN2 995 aaKnown RBP7.37□□□□□ -1.23
SLIRP-204ENST00000555890 RRAGAQ7L523 313 aa7.37□□□□□ -1.23
SLIRP-204ENST00000555890 EEPD1Q7L9B9 569 aa7.37□□□□□ -1.23
SLIRP-204ENST00000555890 RNF180Q86T96 592 aa7.37□□□□□ -1.23
SLIRP-204ENST00000555890 DPP9Q86TI2 863 aa7.37□□□□□ -1.23
SLIRP-204ENST00000555890 FMNL3Q8IVF7 1028 aa7.37□□□□□ -1.23
SLIRP-204ENST00000555890 KSR1Q8IVT5 923 aa7.37□□□□□ -1.23
SLIRP-204ENST00000555890 FAM126BQ8IXS8 530 aa7.37□□□□□ -1.23
SLIRP-204ENST00000555890 XXYLT1Q8NBI6 393 aa7.37□□□□□ -1.23
SLIRP-204ENST00000555890 MYRIPQ8NFW9 859 aa7.37□□□□□ -1.23
SLIRP-204ENST00000555890 RHBDD1Q8TEB9 315 aa7.37□□□□□ -1.23
SLIRP-204ENST00000555890 AFAP1L1Q8TED9 768 aa7.37□□□□□ -1.23
SLIRP-204ENST00000555890 SCFD2Q8WU76 684 aa7.37□□□□□ -1.23
SLIRP-204ENST00000555890 SLC7A3Q8WY07 619 aa7.37□□□□□ -1.23
SLIRP-204ENST00000555890 SYN2Q92777 582 aaPredicted RBP7.37□□□□□ -1.23
SLIRP-204ENST00000555890 CCDC42Q96M95 316 aa7.37□□□□□ -1.23
SLIRP-204ENST00000555890 CHP1Q99653 195 aa7.37□□□□□ -1.23
SLIRP-204ENST00000555890 JPH2Q9BR39 696 aaPredicted RBP7.37□□□□□ -1.23
SLIRP-204ENST00000555890 SH2D3AQ9BRG2 576 aa7.37□□□□□ -1.23
SLIRP-204ENST00000555890 DESI2Q9BSY9 194 aa7.37□□□□□ -1.23
SLIRP-204ENST00000555890 POLR3FQ9H1D9 316 aaPredicted RBP7.37□□□□□ -1.23
SLIRP-204ENST00000555890 NHEJ1Q9H9Q4 299 aaPredicted RBP7.37□□□□□ -1.23
SLIRP-204ENST00000555890 PLCB1Q9NQ66 1216 aa7.37□□□□□ -1.23
SLIRP-204ENST00000555890 GPRC5CQ9NQ84 441 aa7.37□□□□□ -1.23
SLIRP-204ENST00000555890 AGPAT5Q9NUQ2 364 aa7.37□□□□□ -1.23
SLIRP-204ENST00000555890 SLC5A4Q9NY91 659 aa7.37□□□□□ -1.23
SLIRP-204ENST00000555890 DNAI1Q9UI46 699 aa7.37□□□□□ -1.23
SLIRP-204ENST00000555890 TBX20Q9UMR3 447 aa7.37□□□□□ -1.23
SLIRP-204ENST00000555890 PLAGL2Q9UPG8 496 aa7.37□□□□□ -1.23
SLIRP-204ENST00000555890 DAAM1Q9Y4D1 1078 aa7.37□□□□□ -1.23
SLIRP-204ENST00000555890 FREM2Q5SZK8 3169 aa7.36□□□□□ -1.23
SLIRP-204ENST00000555890 TET1Q8NFU7 2136 aa7.36□□□□□ -1.23
SLIRP-204ENST00000555890 DENND3A2RUS2 1198 aa7.36□□□□□ -1.23
SLIRP-204ENST00000555890 EIF3CLB5ME19 914 aaKnown RBP7.36□□□□□ -1.23
SLIRP-204ENST00000555890 TGFBR3LH3BV60 316 aa7.36□□□□□ -1.23
SLIRP-204ENST00000555890 NKRFO15226 690 aaKnown RBP eCLIP7.36□□□□□ -1.23
SLIRP-204ENST00000555890 RARBP10826 455 aa7.36□□□□□ -1.23
SLIRP-204ENST00000555890 TCF7P36402 384 aaPredicted RBP7.36□□□□□ -1.23
SLIRP-204ENST00000555890 SLC26A2P50443 739 aa7.36□□□□□ -1.23
SLIRP-204ENST00000555890 ST13P50502 369 aaKnown RBP7.36□□□□□ -1.23
SLIRP-204ENST00000555890 POLR2FP61218 127 aaKnown RBP7.36□□□□□ -1.23
SLIRP-204ENST00000555890 GNG11P61952 73 aa7.36□□□□□ -1.23
SLIRP-204ENST00000555890 STRN3Q13033 797 aa7.36□□□□□ -1.23
SLIRP-204ENST00000555890 SMAD4Q13485 552 aaKnown RBP7.36□□□□□ -1.23
SLIRP-204ENST00000555890 LAMC2Q13753 1193 aa7.36□□□□□ -1.23
SLIRP-204ENST00000555890 EMC2Q15006 297 aa7.36□□□□□ -1.23
SLIRP-204ENST00000555890 EXOC3L4Q17RC7 722 aa7.36□□□□□ -1.23
SLIRP-204ENST00000555890 LY6KQ17RY6 165 aa7.36□□□□□ -1.23
SLIRP-204ENST00000555890 WDR59Q6PJI9 974 aa7.36□□□□□ -1.23
SLIRP-204ENST00000555890 XKR5Q6UX68 686 aa7.36□□□□□ -1.23
SLIRP-204ENST00000555890 Q6ZVU0 165 aa7.36□□□□□ -1.23
SLIRP-204ENST00000555890 PLPPR4Q7Z2D5 763 aa7.36□□□□□ -1.23
SLIRP-204ENST00000555890 USP37Q86T82 979 aa7.36□□□□□ -1.23
SLIRP-204ENST00000555890 KIAA1328Q86T90 577 aa7.36□□□□□ -1.23
SLIRP-204ENST00000555890 DTWD2Q8NBA8 298 aa7.36□□□□□ -1.23
SLIRP-204ENST00000555890 TCP11Q8WWU5 503 aa7.36□□□□□ -1.23
SLIRP-204ENST00000555890 GLG1Q92896 1179 aa7.36□□□□□ -1.23
SLIRP-204ENST00000555890 SLC35C1Q96A29 364 aa7.36□□□□□ -1.23
SLIRP-204ENST00000555890 CCDC74AQ96AQ1 378 aa7.36□□□□□ -1.23
SLIRP-204ENST00000555890 BORCS6Q96GS4 357 aa7.36□□□□□ -1.23
SLIRP-204ENST00000555890 EIF3CQ99613 913 aaKnown RBP7.36□□□□□ -1.23
SLIRP-204ENST00000555890 CRACR2AQ9BSW2 395 aa7.36□□□□□ -1.23
SLIRP-204ENST00000555890 OSBPL7Q9BZF2 842 aa7.36□□□□□ -1.23
SLIRP-204ENST00000555890 DEF6Q9H4E7 631 aa7.36□□□□□ -1.23
SLIRP-204ENST00000555890 SMARCAD1Q9H4L7 1026 aa7.36□□□□□ -1.23
SLIRP-204ENST00000555890 HAUS4Q9H6D7 363 aa7.36□□□□□ -1.23
SLIRP-204ENST00000555890 VTA1Q9NP79 307 aa7.36□□□□□ -1.23
SLIRP-204ENST00000555890 NLRC4Q9NPP4 1024 aa7.36□□□□□ -1.23
SLIRP-204ENST00000555890 LUC7LQ9NQ29 371 aaKnown RBP7.36□□□□□ -1.23
SLIRP-204ENST00000555890 STARD7Q9NQZ5 370 aa7.36□□□□□ -1.23
SLIRP-204ENST00000555890 HSPBP1Q9NZL4 362 aa7.36□□□□□ -1.23
SLIRP-204ENST00000555890 MYO1AQ9UBC5 1043 aa7.36□□□□□ -1.23
SLIRP-204ENST00000555890 FAM8A1Q9UBU6 413 aa7.36□□□□□ -1.23
SLIRP-204ENST00000555890 MYO6Q9UM54 1294 aa7.36□□□□□ -1.23
SLIRP-204ENST00000555890 FNDC3AQ9Y2H6 1198 aaKnown RBP7.36□□□□□ -1.23
SLIRP-204ENST00000555890 DIS3Q9Y2L1 958 aaKnown RBP7.36□□□□□ -1.23
SLIRP-204ENST00000555890 UQCRHLA0A096LP55 91 aa7.35□□□□□ -1.23
SLIRP-204ENST00000555890 SSU72P8A0A1W2PR75 194 aa7.35□□□□□ -1.23
SLIRP-204ENST00000555890 A6NHS1 94 aa7.35□□□□□ -1.23
SLIRP-204ENST00000555890 LRRC53A6NM62 1247 aa7.35□□□□□ -1.23
SLIRP-204ENST00000555890 ARVCFO00192 962 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms