RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 CDH8P55286 799 aa9.48□□□□□ -0.89
TDP1-210ENST00000554976 KCNA10Q16322 511 aa9.48□□□□□ -0.89
TDP1-210ENST00000554976 PTPROQ16827 1216 aa9.48□□□□□ -0.89
TDP1-210ENST00000554976 GLE1Q53GS7 698 aaKnown RBP9.48□□□□□ -0.89
TDP1-210ENST00000554976 ZNF667Q5HYK9 610 aa9.48□□□□□ -0.89
TDP1-210ENST00000554976 C9orf57Q5W0N0 161 aa9.48□□□□□ -0.89
TDP1-210ENST00000554976 DENND1BQ6P3S1 775 aa9.48□□□□□ -0.89
TDP1-210ENST00000554976 SCARA5Q6ZMJ2 495 aa9.48□□□□□ -0.89
TDP1-210ENST00000554976 LRRC52Q8N7C0 313 aa9.48□□□□□ -0.89
TDP1-210ENST00000554976 GSTCDQ8NEC7 633 aa9.48□□□□□ -0.89
TDP1-210ENST00000554976 PXYLP1Q8TE99 480 aa9.48□□□□□ -0.89
TDP1-210ENST00000554976 C18orf25Q96B23 403 aaPredicted RBP9.48□□□□□ -0.89
TDP1-210ENST00000554976 HPDLQ96IR7 371 aa9.48□□□□□ -0.89
TDP1-210ENST00000554976 PPP1R10Q96QC0 940 aaKnown RBP9.48□□□□□ -0.89
TDP1-210ENST00000554976 TRAIPQ9BWF2 469 aa9.48□□□□□ -0.89
TDP1-210ENST00000554976 WNT8AQ9H1J5 351 aa9.48□□□□□ -0.89
TDP1-210ENST00000554976 XPNPEP3Q9NQH7 507 aa9.48□□□□□ -0.89
TDP1-210ENST00000554976 DMGDHQ9UI17 866 aaKnown RBP9.48□□□□□ -0.89
TDP1-210ENST00000554976 CDY2AQ9Y6F7 541 aa9.48□□□□□ -0.89
TDP1-210ENST00000554976 PTGESO14684 152 aa9.47□□□□□ -0.89
TDP1-210ENST00000554976 ATP8B1O43520 1251 aa9.47□□□□□ -0.89
TDP1-210ENST00000554976 CD58P19256 250 aa9.47□□□□□ -0.89
TDP1-210ENST00000554976 ECHS1P30084 290 aa9.47□□□□□ -0.89
TDP1-210ENST00000554976 MAN1A1P33908 653 aa9.47□□□□□ -0.89
TDP1-210ENST00000554976 APLP1P51693 650 aa9.47□□□□□ -0.89
TDP1-210ENST00000554976 RBP5P82980 135 aa9.47□□□□□ -0.89
TDP1-210ENST00000554976 SOX4Q06945 474 aaPredicted RBP9.47□□□□□ -0.89
TDP1-210ENST00000554976 DSC3Q14574 896 aa9.47□□□□□ -0.89
TDP1-210ENST00000554976 WDR72Q3MJ13 1102 aa9.47□□□□□ -0.89
TDP1-210ENST00000554976 GNASQ5JWF2 1037 aa9.47□□□□□ -0.89
TDP1-210ENST00000554976 LHX8Q68G74 356 aa9.47□□□□□ -0.89
TDP1-210ENST00000554976 PASD1Q8IV76 773 aa9.47□□□□□ -0.89
TDP1-210ENST00000554976 CD99L2Q8TCZ2 262 aa9.47□□□□□ -0.89
TDP1-210ENST00000554976 AENQ8WTP8 325 aaKnown RBP9.47□□□□□ -0.89
TDP1-210ENST00000554976 SEC14L1Q92503 715 aa9.47□□□□□ -0.89
TDP1-210ENST00000554976 ERVK-5Q9HDB9 667 aa9.47□□□□□ -0.89
TDP1-210ENST00000554976 L1RE1Q9UN81 338 aa9.47□□□□□ -0.89
TDP1-210ENST00000554976 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.47□□□□□ -0.89
TDP1-210ENST00000554976 AGAP1Q9UPQ3 857 aa9.47□□□□□ -0.89
TDP1-210ENST00000554976 NR2E1Q9Y466 385 aa9.47□□□□□ -0.89
TDP1-210ENST00000554976 HMGCRP04035 888 aa9.47□□□□□ -0.89
TDP1-210ENST00000554976 TUBBP07437 444 aa9.47□□□□□ -0.89
TDP1-210ENST00000554976 YWHAEP62258 255 aaKnown RBP9.47□□□□□ -0.89
TDP1-210ENST00000554976 TMEM132AQ24JP5 1023 aa9.47□□□□□ -0.89
TDP1-210ENST00000554976 C2CD6Q53TS8 623 aa9.47□□□□□ -0.89
TDP1-210ENST00000554976 AADACL2Q6P093 401 aa9.47□□□□□ -0.89
TDP1-210ENST00000554976 MMS22LQ6ZRQ5 1243 aa9.47□□□□□ -0.89
TDP1-210ENST00000554976 C1orf131Q8NDD1 294 aaKnown RBP9.47□□□□□ -0.89
TDP1-210ENST00000554976 KBTBD7Q8WVZ9 684 aa9.47□□□□□ -0.89
TDP1-210ENST00000554976 KIF12Q96FN5 646 aa9.47□□□□□ -0.89
TDP1-210ENST00000554976 GDAP2Q9NXN4 497 aa9.47□□□□□ -0.89
TDP1-210ENST00000554976 DDX20Q9UHI6 824 aaKnown RBP9.47□□□□□ -0.89
TDP1-210ENST00000554976 SMIM28A0A1B0GU29 152 aa9.46□□□□□ -0.89
TDP1-210ENST00000554976 PGRMC1O00264 195 aaKnown RBP9.46□□□□□ -0.89
TDP1-210ENST00000554976 SPTLC1O15269 473 aa9.46□□□□□ -0.89
TDP1-210ENST00000554976 LRPAP1P30533 357 aa9.46□□□□□ -0.89
TDP1-210ENST00000554976 NSFP46459 744 aaKnown RBP9.46□□□□□ -0.89
TDP1-210ENST00000554976 RPL34P49207 117 aaKnown RBP9.46□□□□□ -0.89
TDP1-210ENST00000554976 OGDHQ02218 1023 aa9.46□□□□□ -0.89
TDP1-210ENST00000554976 CCNI2Q6ZMN8 369 aaPredicted RBP9.46□□□□□ -0.89
TDP1-210ENST00000554976 APBB1IPQ7Z5R6 666 aaPredicted RBP9.46□□□□□ -0.89
TDP1-210ENST00000554976 MRPL10Q7Z7H8 261 aaKnown RBP9.46□□□□□ -0.89
TDP1-210ENST00000554976 NIPA2Q8N8Q9 360 aa9.46□□□□□ -0.89
TDP1-210ENST00000554976 CAGE1Q8TC20 777 aa9.46□□□□□ -0.89
TDP1-210ENST00000554976 DDX27Q96GQ7 796 aaKnown RBP9.46□□□□□ -0.89
TDP1-210ENST00000554976 TMEM176AQ96HP8 235 aa9.46□□□□□ -0.89
TDP1-210ENST00000554976 SCLT1Q96NL6 688 aa9.46□□□□□ -0.89
TDP1-210ENST00000554976 BARX2Q9UMQ3 279 aaPredicted RBP9.46□□□□□ -0.89
TDP1-210ENST00000554976 PIN4Q9Y237 131 aaKnown RBP9.46□□□□□ -0.89
TDP1-210ENST00000554976 BRCA2P51587 3418 aa9.46□□□□□ -0.9
TDP1-210ENST00000554976 TMEM191CA6NGB0 347 aa9.46□□□□□ -0.9
TDP1-210ENST00000554976 O00370 1275 aa9.46□□□□□ -0.9
TDP1-210ENST00000554976 PROSCO94903 275 aa9.46□□□□□ -0.9
TDP1-210ENST00000554976 GNRH1P01148 92 aa9.46□□□□□ -0.9
TDP1-210ENST00000554976 ITGA4P13612 1032 aa9.46□□□□□ -0.9
TDP1-210ENST00000554976 AKAP5P24588 427 aa9.46□□□□□ -0.9
TDP1-210ENST00000554976 PTPN11Q06124 597 aaPredicted RBP9.46□□□□□ -0.9
TDP1-210ENST00000554976 CYP1B1Q16678 543 aa9.46□□□□□ -0.9
TDP1-210ENST00000554976 LONRF2Q1L5Z9 754 aa9.46□□□□□ -0.9
TDP1-210ENST00000554976 PTPN20Q4JDL3 420 aa9.46□□□□□ -0.9
TDP1-210ENST00000554976 RNPC3Q96LT9 517 aaKnown RBP9.46□□□□□ -0.9
TDP1-210ENST00000554976 MRPL45Q9BRJ2 306 aaKnown RBP9.46□□□□□ -0.9
TDP1-210ENST00000554976 C11orf70Q9BRQ4 267 aa9.46□□□□□ -0.9
TDP1-210ENST00000554976 CHST12Q9NRB3 414 aa9.46□□□□□ -0.9
TDP1-210ENST00000554976 TJP2Q9UDY2 1190 aa9.46□□□□□ -0.9
TDP1-210ENST00000554976 GLI1P08151 1106 aa9.45□□□□□ -0.9
TDP1-210ENST00000554976 KRT19P08727 400 aa9.45□□□□□ -0.9
TDP1-210ENST00000554976 PYGMP11217 842 aa9.45□□□□□ -0.9
TDP1-210ENST00000554976 MAP2K2P36507 400 aa9.45□□□□□ -0.9
TDP1-210ENST00000554976 PAFAH1B1P43034 410 aa9.45□□□□□ -0.9
TDP1-210ENST00000554976 GPD2P43304 727 aa9.45□□□□□ -0.9
TDP1-210ENST00000554976 PLA2G4AP47712 749 aa9.45□□□□□ -0.9
TDP1-210ENST00000554976 MESDQ14696 234 aa9.45□□□□□ -0.9
TDP1-210ENST00000554976 SOWAHAQ2M3V2 549 aa9.45□□□□□ -0.9
TDP1-210ENST00000554976 HERPUD2Q9BSE4 406 aa9.45□□□□□ -0.9
TDP1-210ENST00000554976 NXF1Q9UBU9 619 aaKnown RBP9.45□□□□□ -0.9
TDP1-210ENST00000554976 COL4A6Q14031 1691 aa9.45□□□□□ -0.9
TDP1-210ENST00000554976 INPPL1O15357 1258 aa9.45□□□□□ -0.9
TDP1-210ENST00000554976 RAD51CO43502 376 aa9.45□□□□□ -0.9
TDP1-210ENST00000554976 MGEA5O60502 916 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms