RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 GPR27Q9NS67 375 aa5.69□□□□□ -1.5
ATXN3-228ENST00000554592 INTS7Q9NVH2 962 aaKnown RBP5.69□□□□□ -1.5
ATXN3-228ENST00000554592 MAGEC2Q9UBF1 373 aaPredicted RBP5.69□□□□□ -1.5
ATXN3-228ENST00000554592 GULP1Q9UBP9 304 aa5.69□□□□□ -1.5
ATXN3-228ENST00000554592 ISY1Q9ULR0 285 aaKnown RBP5.69□□□□□ -1.5
ATXN3-228ENST00000554592 RWDD3Q9Y3V2 267 aa5.69□□□□□ -1.5
ATXN3-228ENST00000554592 TNPO3Q9Y5L0 923 aaKnown RBP5.69□□□□□ -1.5
ATXN3-228ENST00000554592 IRAK3Q9Y616 596 aa5.69□□□□□ -1.5
ATXN3-228ENST00000554592 CHD9Q3L8U1 2897 aa5.69□□□□□ -1.5
ATXN3-228ENST00000554592 TRBV23OR9-2A0A075B6M9 112 aa5.68□□□□□ -1.5
ATXN3-228ENST00000554592 TCRBV16S1A1N1A0A5B0 115 aa5.68□□□□□ -1.5
ATXN3-228ENST00000554592 ZC3H12DA2A288 527 aaKnown RBP5.68□□□□□ -1.5
ATXN3-228ENST00000554592 TMEM221A6NGB7 291 aa5.68□□□□□ -1.5
ATXN3-228ENST00000554592 GSG1L2A8MUP6 293 aa5.68□□□□□ -1.5
ATXN3-228ENST00000554592 B4DLN1 442 aa5.68□□□□□ -1.5
ATXN3-228ENST00000554592 M0R296 226 aa5.68□□□□□ -1.5
ATXN3-228ENST00000554592 AQP7O14520 342 aa5.68□□□□□ -1.5
ATXN3-228ENST00000554592 PRDM1O75626 825 aa5.68□□□□□ -1.5
ATXN3-228ENST00000554592 AMHP03971 560 aa5.68□□□□□ -1.5
ATXN3-228ENST00000554592 ICAM1P05362 532 aa5.68□□□□□ -1.5
ATXN3-228ENST00000554592 TSPY3P0CV98 308 aa5.68□□□□□ -1.5
ATXN3-228ENST00000554592 TSPY8P0CW00 308 aa5.68□□□□□ -1.5
ATXN3-228ENST00000554592 TXNP10599 105 aaKnown RBP5.68□□□□□ -1.5
ATXN3-228ENST00000554592 CKBP12277 381 aa5.68□□□□□ -1.5
ATXN3-228ENST00000554592 CASTP20810 708 aaKnown RBP5.68□□□□□ -1.5
ATXN3-228ENST00000554592 MRPL12P52815 198 aaKnown RBP5.68□□□□□ -1.5
ATXN3-228ENST00000554592 NCKAP1LP55160 1127 aa5.68□□□□□ -1.5
ATXN3-228ENST00000554592 GPR85P60893 370 aa5.68□□□□□ -1.5
ATXN3-228ENST00000554592 HTRA4P83105 476 aaPredicted RBP5.68□□□□□ -1.5
ATXN3-228ENST00000554592 PRR5P85299 388 aa5.68□□□□□ -1.5
ATXN3-228ENST00000554592 ZNF200P98182 395 aaPredicted RBP5.68□□□□□ -1.5
ATXN3-228ENST00000554592 AMPD3Q01432 767 aa5.68□□□□□ -1.5
ATXN3-228ENST00000554592 TFAP4Q01664 338 aa5.68□□□□□ -1.5
ATXN3-228ENST00000554592 TCF15Q12870 199 aa5.68□□□□□ -1.5
ATXN3-228ENST00000554592 KCNAB2Q13303 367 aa5.68□□□□□ -1.5
ATXN3-228ENST00000554592 PPP2R5BQ15173 497 aa5.68□□□□□ -1.5
ATXN3-228ENST00000554592 SMAD2Q15796 467 aaKnown RBP5.68□□□□□ -1.5
ATXN3-228ENST00000554592 ZNF385BQ569K4 471 aa5.68□□□□□ -1.5
ATXN3-228ENST00000554592 TCEAL5Q5H9L2 206 aa5.68□□□□□ -1.5
ATXN3-228ENST00000554592 FAM129CQ86XR2 697 aa5.68□□□□□ -1.5
ATXN3-228ENST00000554592 SUGP1Q8IWZ8 645 aaKnown RBP5.68□□□□□ -1.5
ATXN3-228ENST00000554592 LZTR1Q8N653 840 aa5.68□□□□□ -1.5
ATXN3-228ENST00000554592 MAGEB10Q96LZ2 347 aaPredicted RBP5.68□□□□□ -1.5
ATXN3-228ENST00000554592 CTAGE1Q96RT6 745 aa5.68□□□□□ -1.5
ATXN3-228ENST00000554592 ZFYVE21Q9BQ24 234 aa5.68□□□□□ -1.5
ATXN3-228ENST00000554592 BRINP2Q9C0B6 783 aa5.68□□□□□ -1.5
ATXN3-228ENST00000554592 PCDH12Q9NPG4 1184 aa5.68□□□□□ -1.5
ATXN3-228ENST00000554592 CLDND1Q9NY35 253 aa5.68□□□□□ -1.5
ATXN3-228ENST00000554592 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.68□□□□□ -1.5
ATXN3-228ENST00000554592 MUTYHQ9UIF7 546 aa5.68□□□□□ -1.5
ATXN3-228ENST00000554592 PNMA2Q9UL42 364 aa5.68□□□□□ -1.5
ATXN3-228ENST00000554592 CCPG1Q9ULG6 757 aa5.68□□□□□ -1.5
ATXN3-228ENST00000554592 PCDHA9Q9Y5H5 950 aa5.68□□□□□ -1.5
ATXN3-228ENST00000554592 PCDHA8Q9Y5H6 950 aa5.68□□□□□ -1.5
ATXN3-228ENST00000554592 PTPDC1A2A3K4 754 aa5.67□□□□□ -1.5
ATXN3-228ENST00000554592 MBTPS2O43462 519 aa5.67□□□□□ -1.5
ATXN3-228ENST00000554592 RAB11FIP3O75154 756 aa5.67□□□□□ -1.5
ATXN3-228ENST00000554592 CHGBP05060 677 aa5.67□□□□□ -1.5
ATXN3-228ENST00000554592 APPP05067 770 aa5.67□□□□□ -1.5
ATXN3-228ENST00000554592 RB1P06400 928 aa5.67□□□□□ -1.5
ATXN3-228ENST00000554592 SLC3A2P08195 630 aaKnown RBP5.67□□□□□ -1.5
ATXN3-228ENST00000554592 GNAT2P19087 354 aa5.67□□□□□ -1.5
ATXN3-228ENST00000554592 CALML3P27482 149 aa5.67□□□□□ -1.5
ATXN3-228ENST00000554592 SNAP25P60880 206 aa5.67□□□□□ -1.5
ATXN3-228ENST00000554592 ZNF460Q14592 562 aa5.67□□□□□ -1.5
ATXN3-228ENST00000554592 TCTN1Q2MV58 587 aa5.67□□□□□ -1.5
ATXN3-228ENST00000554592 CNNM4Q6P4Q7 775 aa5.67□□□□□ -1.5
ATXN3-228ENST00000554592 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.67□□□□□ -1.5
ATXN3-228ENST00000554592 RNF207Q6ZRF8 634 aa5.67□□□□□ -1.5
ATXN3-228ENST00000554592 KCTD1Q719H9 257 aa5.67□□□□□ -1.5
ATXN3-228ENST00000554592 ITPRIPQ8IWB1 547 aa5.67□□□□□ -1.5
ATXN3-228ENST00000554592 FTSJ3Q8IY81 847 aaKnown RBP5.67□□□□□ -1.5
ATXN3-228ENST00000554592 IFNL3Q8IZI9 196 aa5.67□□□□□ -1.5
ATXN3-228ENST00000554592 C7orf31Q8N865 590 aa5.67□□□□□ -1.5
ATXN3-228ENST00000554592 DBF4BQ8NFT6 615 aa5.67□□□□□ -1.5
ATXN3-228ENST00000554592 DNERQ8NFT8 737 aa5.67□□□□□ -1.5
ATXN3-228ENST00000554592 DDX1Q92499 740 aaKnown RBP5.67□□□□□ -1.5
ATXN3-228ENST00000554592 KAT2BQ92831 832 aa5.67□□□□□ -1.5
ATXN3-228ENST00000554592 ATOH1Q92858 354 aaPredicted RBP5.67□□□□□ -1.5
ATXN3-228ENST00000554592 LMAN2LQ9H0V9 348 aa5.67□□□□□ -1.5
ATXN3-228ENST00000554592 RXFP1Q9HBX9 757 aa5.67□□□□□ -1.5
ATXN3-228ENST00000554592 CHD7Q9P2D1 2997 aa5.67□□□□□ -1.5
ATXN3-228ENST00000554592 EMSYQ7Z589 1322 aa5.67□□□□□ -1.5
ATXN3-228ENST00000554592 LRRC37A2A6NM11 1700 aa5.66□□□□□ -1.5
ATXN3-228ENST00000554592 KRTAP9-7A8MTY7 169 aa5.66□□□□□ -1.5
ATXN3-228ENST00000554592 OPA1O60313 960 aa5.66□□□□□ -1.5
ATXN3-228ENST00000554592 NPHS1O60500 1241 aa5.66□□□□□ -1.5
ATXN3-228ENST00000554592 BUB1BO60566 1050 aaPredicted RBP5.66□□□□□ -1.5
ATXN3-228ENST00000554592 HMMRO75330 724 aa5.66□□□□□ -1.5
ATXN3-228ENST00000554592 GH1P01241 217 aa5.66□□□□□ -1.5
ATXN3-228ENST00000554592 ASLP04424 464 aa5.66□□□□□ -1.5
ATXN3-228ENST00000554592 ATF2P15336 505 aa5.66□□□□□ -1.5
ATXN3-228ENST00000554592 EDNRBP24530 442 aa5.66□□□□□ -1.5
ATXN3-228ENST00000554592 TDO2P48775 406 aa5.66□□□□□ -1.5
ATXN3-228ENST00000554592 ZXDAP98168 799 aa5.66□□□□□ -1.5
ATXN3-228ENST00000554592 GUCY1A3Q02108 690 aa5.66□□□□□ -1.5
ATXN3-228ENST00000554592 SMAD4Q13485 552 aaKnown RBP5.66□□□□□ -1.5
ATXN3-228ENST00000554592 DGKDQ16760 1214 aa5.66□□□□□ -1.5
ATXN3-228ENST00000554592 TRIM71Q2Q1W2 868 aaKnown RBP5.66□□□□□ -1.5
ATXN3-228ENST00000554592 ZNF618Q5T7W0 954 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms