RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 LPCAT2Q7L5N7 544 aa18.47■□□□□ 0.55
NEK9-204ENST00000554258 KRT25Q7Z3Z0 450 aa18.47■□□□□ 0.55
NEK9-204ENST00000554258 SCUBE3Q8IX30 993 aa18.47■□□□□ 0.55
NEK9-204ENST00000554258 LSM14AQ8ND56 463 aaKnown RBP18.47■□□□□ 0.55
NEK9-204ENST00000554258 PIP4K2CQ8TBX8 421 aa18.47■□□□□ 0.55
NEK9-204ENST00000554258 BRMS1Q9HCU9 246 aa18.47■□□□□ 0.55
NEK9-204ENST00000554258 TMEM74BQ9NUR3 256 aa18.47■□□□□ 0.55
NEK9-204ENST00000554258 MTMR6Q9Y217 621 aa18.47■□□□□ 0.55
NEK9-204ENST00000554258 ATMQ13315 3056 aa18.47■□□□□ 0.55
NEK9-204ENST00000554258 COL12A1Q99715 3063 aa18.46■□□□□ 0.55
NEK9-204ENST00000554258 ZNF638Q14966 1978 aaKnown RBP18.46■□□□□ 0.55
NEK9-204ENST00000554258 TEX15Q9BXT5 2789 aa18.46■□□□□ 0.55
NEK9-204ENST00000554258 TNFRSF10BO14763 440 aa18.46■□□□□ 0.55
NEK9-204ENST00000554258 TBX3O15119 743 aa18.46■□□□□ 0.55
NEK9-204ENST00000554258 STX6O43752 255 aa18.46■□□□□ 0.55
NEK9-204ENST00000554258 DKC1O60832 514 aaKnown RBP eCLIP18.46■□□□□ 0.55
NEK9-204ENST00000554258 RECQL4O94761 1208 aa18.46■□□□□ 0.55
NEK9-204ENST00000554258 AMPD2Q01433 879 aa18.46■□□□□ 0.55
NEK9-204ENST00000554258 NR5A1Q13285 461 aa18.46■□□□□ 0.55
NEK9-204ENST00000554258 CAMK1GQ96NX5 476 aa18.46■□□□□ 0.55
NEK9-204ENST00000554258 IPO9Q96P70 1041 aaKnown RBP18.46■□□□□ 0.55
NEK9-204ENST00000554258 MTRQ99707 1265 aa18.46■□□□□ 0.55
NEK9-204ENST00000554258 FBRSL1Q9HCM7 1045 aaKnown RBP18.46■□□□□ 0.55
NEK9-204ENST00000554258 FSCN3Q9NQT6 498 aa18.46■□□□□ 0.55
NEK9-204ENST00000554258 CEP192Q8TEP8 1941 aa18.46■□□□□ 0.55
NEK9-204ENST00000554258 ATXN2Q99700 1313 aaKnown RBP18.46■□□□□ 0.55
NEK9-204ENST00000554258 H3BQV1 296 aa18.45■□□□□ 0.54
NEK9-204ENST00000554258 H7C4K7 107 aa18.45■□□□□ 0.54
NEK9-204ENST00000554258 CAPN9O14815 690 aa18.45■□□□□ 0.54
NEK9-204ENST00000554258 PRAMEF12O95522 483 aa18.45■□□□□ 0.54
NEK9-204ENST00000554258 CD59P13987 128 aa18.45■□□□□ 0.54
NEK9-204ENST00000554258 DPP6P42658 865 aa18.45■□□□□ 0.54
NEK9-204ENST00000554258 GFPT1Q06210 699 aaPredicted RBP18.45■□□□□ 0.54
NEK9-204ENST00000554258 POU5F1BQ06416 359 aa18.45■□□□□ 0.54
NEK9-204ENST00000554258 CYP4F3Q08477 520 aa18.45■□□□□ 0.54
NEK9-204ENST00000554258 PSMD2Q13200 908 aa18.45■□□□□ 0.54
NEK9-204ENST00000554258 CAPSQ13938 189 aa18.45■□□□□ 0.54
NEK9-204ENST00000554258 EARS2Q5JPH6 523 aaKnown RBP18.45■□□□□ 0.54
NEK9-204ENST00000554258 ANO7Q6IWH7 933 aa18.45■□□□□ 0.54
NEK9-204ENST00000554258 CD300LGQ6UXG3 332 aa18.45■□□□□ 0.54
NEK9-204ENST00000554258 TMC8Q8IU68 726 aa18.45■□□□□ 0.54
NEK9-204ENST00000554258 CHFRQ96EP1 664 aa18.45■□□□□ 0.54
NEK9-204ENST00000554258 LRRC3Q9BY71 257 aa18.45■□□□□ 0.54
NEK9-204ENST00000554258 GKN1Q9NS71 199 aa18.45■□□□□ 0.54
NEK9-204ENST00000554258 AFF4Q9UHB7 1163 aaKnown RBP18.45■□□□□ 0.54
NEK9-204ENST00000554258 FBXL5Q9UKA1 691 aa18.45■□□□□ 0.54
NEK9-204ENST00000554258 APOBEC2Q9Y235 224 aaKnown RBP18.45■□□□□ 0.54
NEK9-204ENST00000554258 MGAQ8IWI9 3026 aa18.44■□□□□ 0.54
NEK9-204ENST00000554258 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.44■□□□□ 0.54
NEK9-204ENST00000554258 MAP3K13O43283 966 aa18.44■□□□□ 0.54
NEK9-204ENST00000554258 PTGER3P43115 390 aa18.44■□□□□ 0.54
NEK9-204ENST00000554258 USP11P51784 963 aa18.44■□□□□ 0.54
NEK9-204ENST00000554258 RUNX3Q13761 415 aa18.44■□□□□ 0.54
NEK9-204ENST00000554258 UPP1Q16831 310 aa18.44■□□□□ 0.54
NEK9-204ENST00000554258 GPR158Q5T848 1215 aa18.44■□□□□ 0.54
NEK9-204ENST00000554258 TMEFF1Q8IYR6 380 aa18.44■□□□□ 0.54
NEK9-204ENST00000554258 MINDY1Q8N5J2 469 aa18.44■□□□□ 0.54
NEK9-204ENST00000554258 C3orf58Q8NDZ4 430 aa18.44■□□□□ 0.54
NEK9-204ENST00000554258 UROC1Q96N76 676 aa18.44■□□□□ 0.54
NEK9-204ENST00000554258 DCBLD2Q96PD2 775 aa18.44■□□□□ 0.54
NEK9-204ENST00000554258 CIZ1Q9ULV3 898 aaPredicted RBP18.44■□□□□ 0.54
NEK9-204ENST00000554258 MAFFQ9ULX9 164 aa18.44■□□□□ 0.54
NEK9-204ENST00000554258 SLC6A14Q9UN76 642 aa18.44■□□□□ 0.54
NEK9-204ENST00000554258 PCDH15Q96QU1 1955 aa18.43■□□□□ 0.54
NEK9-204ENST00000554258 SH3BP5O60239 455 aa18.43■□□□□ 0.54
NEK9-204ENST00000554258 GALK1P51570 392 aa18.43■□□□□ 0.54
NEK9-204ENST00000554258 CTXN3Q4LDR2 81 aa18.43■□□□□ 0.54
NEK9-204ENST00000554258 ARHGAP15Q53QZ3 475 aa18.43■□□□□ 0.54
NEK9-204ENST00000554258 XKR9Q5GH70 373 aa18.43■□□□□ 0.54
NEK9-204ENST00000554258 GLRA4Q5JXX5 417 aa18.43■□□□□ 0.54
NEK9-204ENST00000554258 NOSTRINQ8IVI9 506 aa18.43■□□□□ 0.54
NEK9-204ENST00000554258 EXOC4Q96A65 974 aa18.43■□□□□ 0.54
NEK9-204ENST00000554258 CNOT6LQ96LI5 555 aaKnown RBP18.43■□□□□ 0.54
NEK9-204ENST00000554258 P2RY13Q9BPV8 354 aa18.43■□□□□ 0.54
NEK9-204ENST00000554258 ATXN3LQ9H3M9 355 aa18.43■□□□□ 0.54
NEK9-204ENST00000554258 EBF3Q9H4W6 596 aa18.43■□□□□ 0.54
NEK9-204ENST00000554258 YIPF1Q9Y548 306 aa18.43■□□□□ 0.54
NEK9-204ENST00000554258 STK24Q9Y6E0 443 aa18.43■□□□□ 0.54
NEK9-204ENST00000554258 CAPN8A6NHC0 703 aa18.42■□□□□ 0.54
NEK9-204ENST00000554258 OTOL1A6NHN0 477 aaPredicted RBP18.42■□□□□ 0.54
NEK9-204ENST00000554258 EML1O00423 815 aa18.42■□□□□ 0.54
NEK9-204ENST00000554258 CPB1P15086 417 aa18.42■□□□□ 0.54
NEK9-204ENST00000554258 YWHABP31946 246 aaKnown RBP18.42■□□□□ 0.54
NEK9-204ENST00000554258 PLD1Q13393 1074 aa18.42■□□□□ 0.54
NEK9-204ENST00000554258 Q4G0T1 1027 aa18.42■□□□□ 0.54
NEK9-204ENST00000554258 LYSMD4Q5XG99 296 aa18.42■□□□□ 0.54
NEK9-204ENST00000554258 TOGARAM2Q6ZUX3 1019 aa18.42■□□□□ 0.54
NEK9-204ENST00000554258 OTUD6AQ7L8S5 288 aa18.42■□□□□ 0.54
NEK9-204ENST00000554258 RASSF3Q86WH2 238 aa18.42■□□□□ 0.54
NEK9-204ENST00000554258 TTC30AQ86WT1 665 aa18.42■□□□□ 0.54
NEK9-204ENST00000554258 OR2I1PQ8NGU4 316 aa18.42■□□□□ 0.54
NEK9-204ENST00000554258 ASAP3Q8TDY4 903 aa18.42■□□□□ 0.54
NEK9-204ENST00000554258 TBCKQ8TEA7 893 aa18.42■□□□□ 0.54
NEK9-204ENST00000554258 NFKBIZQ9BYH8 718 aa18.42■□□□□ 0.54
NEK9-204ENST00000554258 GOLGA2P5Q9HBQ8 144 aa18.42■□□□□ 0.54
NEK9-204ENST00000554258 POLMQ9NP87 494 aaPredicted RBP18.42■□□□□ 0.54
NEK9-204ENST00000554258 HPS4Q9NQG7 708 aa18.42■□□□□ 0.54
NEK9-204ENST00000554258 WRAP73Q9P2S5 460 aaPredicted RBP18.42■□□□□ 0.54
NEK9-204ENST00000554258 DAXXQ9UER7 740 aaPredicted RBP18.42■□□□□ 0.54
NEK9-204ENST00000554258 ZDHHC9Q9Y397 364 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms