RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 ADAMTS1Q9UHI8 967 aa11.16□□□□□ -0.62
TMEM55B-205ENST00000554028 ZMYND8Q9ULU4 1186 aaPredicted RBP11.16□□□□□ -0.62
TMEM55B-205ENST00000554028 CEP83Q9Y592 693 aa11.16□□□□□ -0.62
TMEM55B-205ENST00000554028 KIAA0100Q14667 2235 aaKnown RBP11.16□□□□□ -0.62
TMEM55B-205ENST00000554028 GOLGA6L9A6NEM1 432 aa11.15□□□□□ -0.62
TMEM55B-205ENST00000554028 TMEM189-UBE2V1I3L0A0 370 aa11.15□□□□□ -0.62
TMEM55B-205ENST00000554028 SPTLC1O15269 473 aa11.15□□□□□ -0.62
TMEM55B-205ENST00000554028 CILPO75339 1184 aa11.15□□□□□ -0.62
TMEM55B-205ENST00000554028 PLEKP08567 350 aaPredicted RBP11.15□□□□□ -0.62
TMEM55B-205ENST00000554028 VDRP11473 427 aa11.15□□□□□ -0.62
TMEM55B-205ENST00000554028 MAGEA1P43355 309 aa11.15□□□□□ -0.62
TMEM55B-205ENST00000554028 NDST1P52848 882 aa11.15□□□□□ -0.62
TMEM55B-205ENST00000554028 CDR2Q01850 454 aa11.15□□□□□ -0.62
TMEM55B-205ENST00000554028 INCA1Q0VD86 236 aa11.15□□□□□ -0.62
TMEM55B-205ENST00000554028 ELAVL2Q12926 359 aaKnown RBP11.15□□□□□ -0.62
TMEM55B-205ENST00000554028 BTG3Q14201 252 aaPredicted RBP11.15□□□□□ -0.62
TMEM55B-205ENST00000554028 STILQ15468 1287 aa11.15□□□□□ -0.62
TMEM55B-205ENST00000554028 SLC18A3Q16572 532 aa11.15□□□□□ -0.62
TMEM55B-205ENST00000554028 SOWAHAQ2M3V2 549 aa11.15□□□□□ -0.62
TMEM55B-205ENST00000554028 PAN2Q504Q3 1202 aaKnown RBP11.15□□□□□ -0.62
TMEM55B-205ENST00000554028 CCDC122Q5T0U0 273 aa11.15□□□□□ -0.62
TMEM55B-205ENST00000554028 FAM117BQ6P1L5 589 aa11.15□□□□□ -0.62
TMEM55B-205ENST00000554028 RAD9BQ6WBX8 426 aa11.15□□□□□ -0.62
TMEM55B-205ENST00000554028 TRIM72Q6ZMU5 477 aa11.15□□□□□ -0.62
TMEM55B-205ENST00000554028 ZNF571Q7Z3V5 609 aaPredicted RBP11.15□□□□□ -0.62
TMEM55B-205ENST00000554028 SLC47A2Q86VL8 602 aa11.15□□□□□ -0.62
TMEM55B-205ENST00000554028 CMTR2Q8IYT2 770 aaKnown RBP11.15□□□□□ -0.62
TMEM55B-205ENST00000554028 CRIPAKQ8N1N5 446 aa11.15□□□□□ -0.62
TMEM55B-205ENST00000554028 UBR7Q8N806 425 aa11.15□□□□□ -0.62
TMEM55B-205ENST00000554028 KIAA1524Q8TCG1 905 aa11.15□□□□□ -0.62
TMEM55B-205ENST00000554028 EPS8L1Q8TE68 723 aa11.15□□□□□ -0.62
TMEM55B-205ENST00000554028 RABGGTAQ92696 567 aa11.15□□□□□ -0.62
TMEM55B-205ENST00000554028 NRDE2Q9H7Z3 1164 aa11.15□□□□□ -0.62
TMEM55B-205ENST00000554028 AAASQ9NRG9 546 aa11.15□□□□□ -0.62
TMEM55B-205ENST00000554028 PYCARDQ9ULZ3 195 aa11.15□□□□□ -0.62
TMEM55B-205ENST00000554028 PRG3Q9Y2Y8 225 aaPredicted RBP11.15□□□□□ -0.62
TMEM55B-205ENST00000554028 SLC4A7Q9Y6M7 1214 aa11.15□□□□□ -0.62
TMEM55B-205ENST00000554028 RBAK-RBAKDNI3L0D1 243 aa11.14□□□□□ -0.63
TMEM55B-205ENST00000554028 NRP1O14786 923 aa11.14□□□□□ -0.63
TMEM55B-205ENST00000554028 WARSP23381 471 aaKnown RBP11.14□□□□□ -0.63
TMEM55B-205ENST00000554028 PCSK1P29120 753 aa11.14□□□□□ -0.63
TMEM55B-205ENST00000554028 GATMP50440 423 aa11.14□□□□□ -0.63
TMEM55B-205ENST00000554028 ZNF132P52740 706 aa11.14□□□□□ -0.63
TMEM55B-205ENST00000554028 DEFB103AP81534 67 aa11.14□□□□□ -0.63
TMEM55B-205ENST00000554028 MTF1Q14872 753 aa11.14□□□□□ -0.63
TMEM55B-205ENST00000554028 TIGD5Q53EQ6 642 aa11.14□□□□□ -0.63
TMEM55B-205ENST00000554028 SGO2Q562F6 1265 aa11.14□□□□□ -0.63
TMEM55B-205ENST00000554028 TMEM240Q5SV17 173 aa11.14□□□□□ -0.63
TMEM55B-205ENST00000554028 TAF3Q5VWG9 929 aa11.14□□□□□ -0.63
TMEM55B-205ENST00000554028 ALKBH5Q6P6C2 394 aaKnown RBP11.14□□□□□ -0.63
TMEM55B-205ENST00000554028 NOP9Q86U38 636 aaKnown RBP11.14□□□□□ -0.63
TMEM55B-205ENST00000554028 GLYCTKQ8IVS8 523 aa11.14□□□□□ -0.63
TMEM55B-205ENST00000554028 TMEM130Q8N3G9 435 aa11.14□□□□□ -0.63
TMEM55B-205ENST00000554028 PDCL2Q8N4E4 241 aa11.14□□□□□ -0.63
TMEM55B-205ENST00000554028 PHOSPHO2Q8TCD6 241 aa11.14□□□□□ -0.63
TMEM55B-205ENST00000554028 HERVK_113Q902F9 699 aa11.14□□□□□ -0.63
TMEM55B-205ENST00000554028 VWCEQ96DN2 955 aa11.14□□□□□ -0.63
TMEM55B-205ENST00000554028 SUSD3Q96L08 255 aa11.14□□□□□ -0.63
TMEM55B-205ENST00000554028 SLC9A7Q96T83 725 aa11.14□□□□□ -0.63
TMEM55B-205ENST00000554028 MRPL45Q9BRJ2 306 aaKnown RBP11.14□□□□□ -0.63
TMEM55B-205ENST00000554028 PAAF1Q9BRP4 392 aa11.14□□□□□ -0.63
TMEM55B-205ENST00000554028 SDCBP2Q9H190 292 aa11.14□□□□□ -0.63
TMEM55B-205ENST00000554028 SPTLC3Q9NUV7 552 aa11.14□□□□□ -0.63
TMEM55B-205ENST00000554028 CACNG4Q9UBN1 327 aa11.14□□□□□ -0.63
TMEM55B-205ENST00000554028 PCDHB8Q9UN66 801 aa11.14□□□□□ -0.63
TMEM55B-205ENST00000554028 L1RE1Q9UN81 338 aa11.14□□□□□ -0.63
TMEM55B-205ENST00000554028 INSL6Q9Y581 213 aa11.14□□□□□ -0.63
TMEM55B-205ENST00000554028 ADGRG1Q9Y653 693 aa11.14□□□□□ -0.63
TMEM55B-205ENST00000554028 CITO14578 2027 aa11.13□□□□□ -0.63
TMEM55B-205ENST00000554028 TANC1Q9C0D5 1861 aa11.13□□□□□ -0.63
TMEM55B-205ENST00000554028 A0A087X0T9 212 aa11.13□□□□□ -0.63
TMEM55B-205ENST00000554028 ESPNB1AK53 854 aa11.13□□□□□ -0.63
TMEM55B-205ENST00000554028 M0QZQ0 153 aa11.13□□□□□ -0.63
TMEM55B-205ENST00000554028 LCA5LO95447 670 aa11.13□□□□□ -0.63
TMEM55B-205ENST00000554028 GALTP07902 379 aa11.13□□□□□ -0.63
TMEM55B-205ENST00000554028 MMEP08473 750 aa11.13□□□□□ -0.63
TMEM55B-205ENST00000554028 PDGFRBP09619 1106 aa11.13□□□□□ -0.63
TMEM55B-205ENST00000554028 FAM228BP0C875 321 aa11.13□□□□□ -0.63
TMEM55B-205ENST00000554028 LAG3P18627 525 aa11.13□□□□□ -0.63
TMEM55B-205ENST00000554028 TYMPP19971 482 aa11.13□□□□□ -0.63
TMEM55B-205ENST00000554028 AARSP49588 968 aaKnown RBP eCLIP11.13□□□□□ -0.63
TMEM55B-205ENST00000554028 RAD23BP54727 409 aa11.13□□□□□ -0.63
TMEM55B-205ENST00000554028 BCAR1P56945 870 aa11.13□□□□□ -0.63
TMEM55B-205ENST00000554028 SLC8A3P57103 927 aa11.13□□□□□ -0.63
TMEM55B-205ENST00000554028 GFPT1Q06210 699 aaPredicted RBP11.13□□□□□ -0.63
TMEM55B-205ENST00000554028 KIF5AQ12840 1032 aa11.13□□□□□ -0.63
TMEM55B-205ENST00000554028 ASTE1Q2TB18 679 aaPredicted RBP11.13□□□□□ -0.63
TMEM55B-205ENST00000554028 ARHGAP29Q52LW3 1261 aa11.13□□□□□ -0.63
TMEM55B-205ENST00000554028 WSCD1Q658N2 575 aa11.13□□□□□ -0.63
TMEM55B-205ENST00000554028 TOGARAM2Q6ZUX3 1019 aa11.13□□□□□ -0.63
TMEM55B-205ENST00000554028 C16orf59Q7L2K0 433 aa11.13□□□□□ -0.63
TMEM55B-205ENST00000554028 LIMS2Q7Z4I7 341 aa11.13□□□□□ -0.63
TMEM55B-205ENST00000554028 TMEM35BQ8NCS4 154 aa11.13□□□□□ -0.63
TMEM55B-205ENST00000554028 HASPINQ8TF76 798 aa11.13□□□□□ -0.63
TMEM55B-205ENST00000554028 ZNF606Q8WXB4 792 aa11.13□□□□□ -0.63
TMEM55B-205ENST00000554028 ZNF558Q96NG5 402 aa11.13□□□□□ -0.63
TMEM55B-205ENST00000554028 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.13□□□□□ -0.633e-6■□□□□ 9.4
TMEM55B-205ENST00000554028 DESI2Q9BSY9 194 aa11.13□□□□□ -0.63
TMEM55B-205ENST00000554028 TSGA10Q9BZW7 698 aa11.13□□□□□ -0.63
TMEM55B-205ENST00000554028 ZNF518BQ9C0D4 1074 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms