RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 FOXD2O60548 495 aaPredicted RBP4.27□□□□□ -1.73
RDH11-204ENST00000553578 RASSF9O75901 435 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 TSPAN9O75954 239 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 SFTPCP11686 197 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 SFPQP23246 707 aaKnown RBP eCLIP4.27□□□□□ -1.73
RDH11-204ENST00000553578 AKT1P31749 480 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 KCNJ5P48544 419 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 TMED10P49755 219 aaKnown RBP4.27□□□□□ -1.73
RDH11-204ENST00000553578 BASP1P80723 227 aaKnown RBP4.27□□□□□ -1.73
RDH11-204ENST00000553578 CHRNDQ07001 517 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 FAPQ12884 760 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 ORC2Q13416 577 aaPredicted RBP4.27□□□□□ -1.73
RDH11-204ENST00000553578 GRM2Q14416 872 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 SLC45A4Q5BKX6 768 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 FAM83BQ5T0W9 1011 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 KLHDC7AQ5VTJ3 777 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 TBC1D9BQ66K14 1250 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 NEK5Q6P3R8 708 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 ZNF554Q86TJ5 538 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 CABP7Q86V35 215 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 AMIGO3Q86WK7 504 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 HIC2Q96JB3 615 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 TCEANC2Q96MN5 208 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 GDAP1L1Q96MZ0 367 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 OSMRQ99650 979 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 PLVAPQ9BX97 442 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 BOLA2Q9H3K6 86 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 ACTR5Q9H9F9 607 aaPredicted RBP4.27□□□□□ -1.73
RDH11-204ENST00000553578 LY9Q9HBG7 655 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 LRRC4BQ9NT99 713 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 HPSEQ9Y251 543 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 SCN9AQ15858 1988 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 ELOA3CA0A087WX78 387 aaPredicted RBP4.27□□□□□ -1.73
RDH11-204ENST00000553578 ELOA3DA6NLF2 546 aaPredicted RBP4.27□□□□□ -1.73
RDH11-204ENST00000553578 J3QW42 95 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 USO1O60763 962 aaKnown RBP4.27□□□□□ -1.73
RDH11-204ENST00000553578 PPP6R2O75170 966 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 RHOBTB3O94955 611 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 LCA5LO95447 670 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 TUBB4AP04350 444 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 POU2F2P09086 479 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 CCDC166P0CW27 439 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 GYS1P13807 737 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 ACPPP15309 386 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 PPARGP37231 505 aaPredicted RBP4.27□□□□□ -1.73
RDH11-204ENST00000553578 STAT6P42226 847 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 TIMM10P62072 90 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 PPFIA1Q13136 1202 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 ELOA3BQ3SY89 546 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 KIAA1614Q5VZ46 1190 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 ADALQ6DHV7 355 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 DDX53Q86TM3 631 aaKnown RBP4.27□□□□□ -1.73
RDH11-204ENST00000553578 SPICE1Q8N0Z3 855 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 FAM133AQ8N9E0 248 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 DAGLBQ8NCG7 672 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 ELOA3Q8NG57 546 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 FBXO41Q8TF61 875 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 TTC17Q96AE7 1141 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 NSUN4Q96CB9 384 aaKnown RBP4.27□□□□□ -1.73
RDH11-204ENST00000553578 CALML4Q96GE6 196 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 RUNDC3BQ96NL0 473 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 RUSC1Q9BVN2 902 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 MOV10L1Q9BXT6 1211 aaKnown RBP4.27□□□□□ -1.73
RDH11-204ENST00000553578 RNF38Q9H0F5 515 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 IFT22Q9H7X7 185 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 NMRK2Q9NPI5 230 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 SH3GLB2Q9NR46 395 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 ATP8A2Q9NTI2 1148 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 ARHGEF38Q9NXL2 777 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 EURLQ9NYK6 297 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 RPS6KA6Q9UK32 745 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 TIMM22Q9Y584 194 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 A0A1W2PQJ5 194 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 PCP4L1A6NKN8 68 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 MAP2K7O14733 419 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 KCNQ2O43526 872 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 TACC1O75410 805 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 ZNF202O95125 648 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 YEATS4O95619 227 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 EPXP11678 715 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 PEX2P28328 305 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 PAFAH1B1P43034 410 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 AKAP17AQ02040 695 aaKnown RBP4.27□□□□□ -1.73
RDH11-204ENST00000553578 NFE2Q16621 373 aaPredicted RBP4.27□□□□□ -1.73
RDH11-204ENST00000553578 TM4SF20Q53R12 229 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 LDHAL6AQ6ZMR3 332 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 RSPH3Q86UC2 560 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 OXR1Q8N573 874 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 MAGEC3Q8TD91 643 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 ZFPM2Q8WW38 1151 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 SNX27Q96L92 541 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 XPO4Q9C0E2 1151 aaKnown RBP4.27□□□□□ -1.73
RDH11-204ENST00000553578 SCAND2PQ9GZW5 306 aaPredicted RBP4.27□□□□□ -1.73
RDH11-204ENST00000553578 CARD9Q9H257 536 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 LIN7BQ9HAP6 207 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 VTA1Q9NP79 307 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 CNGB3Q9NQW8 809 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 OGDHLQ9ULD0 1010 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 MKL2Q9ULH7 1088 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 PHTF1Q9UMS5 762 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms