RNA–Protein interactions for RNA: ENST00000552620.1

CHMP4A-210, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 716 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-210ENST00000552620 TGFB1I1O43294 461 aa6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 PLA2G6O60733 806 aa6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 ENTPD3O75355 529 aa6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 SLITRK3O94933 977 aa6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 TIAF1O95411 115 aa6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 GGPS1O95749 300 aa6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 FAM107AO95990 144 aa6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 KRT14P02533 472 aa6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 FAM86B2P0C5J1 330 aa6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 POLR2MP0CAP2 368 aa6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 NAT2P11245 290 aa6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 BMP3P12645 472 aa6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 DRD2P14416 443 aa6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 ECHS1P30084 290 aa6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 NTF4P34130 210 aa6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 PDE6BP35913 854 aa6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 CAP2P40123 477 aa6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 FMO5P49326 533 aa6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 GSK3AP49840 483 aa6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 CASP5P51878 434 aa6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 PRELPP51888 382 aa6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 ZNF131P52739 623 aa6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 GALCP54803 685 aa6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 ICA1Q05084 483 aa6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 PPATQ06203 517 aa6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 DDR1Q08345 913 aa6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 CETN1Q12798 172 aa6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 PDCLQ13371 301 aa6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 ALCAMQ13740 583 aa6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 ABCB5Q2M3G0 1257 aa6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 GNPTABQ3T906 1256 aa6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 DCAF17Q5H9S7 520 aaPredicted RBP6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 TCERG1LQ5VWI1 586 aa6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 MMS22LQ6ZRQ5 1243 aa6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 ZNF720Q7Z2F6 126 aa6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 DAAM2Q86T65 1068 aa6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 SLC51AQ86UW1 340 aa6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 TAX1BP1Q86VP1 789 aa6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 NLRP14Q86W24 1093 aa6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 MYCT1Q8N699 235 aa6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 OTUD6BQ8N6M0 293 aa6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 NEK9Q8TD19 979 aa6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 ZNF473Q8WTR7 871 aaKnown RBP6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 U2AF1L4Q8WU68 220 aaKnown RBP6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 CTNNBL1Q8WYA6 563 aaPredicted RBP6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 RFFLQ8WZ73 363 aa6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 P3H4Q92791 437 aa6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 SLC5A5Q92911 643 aa6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 CENPTQ96BT3 561 aa6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 ZBTB9Q96C00 473 aa6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 CCT8L2Q96SF2 557 aa6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 CEP41Q9BYV8 373 aa6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 WDR11Q9BZH6 1224 aa6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 FAM129AQ9BZQ8 928 aa6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 CARD9Q9H257 536 aa6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 BHMT2Q9H2M3 363 aa6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 GSX1Q9H4S2 264 aaPredicted RBP6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 CNOT10Q9H9A5 744 aaKnown RBP6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 PARVGQ9HBI0 331 aa6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 GCNT4Q9P109 453 aa6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 DNAJC12Q9UKB3 198 aa6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 PACSIN2Q9UNF0 486 aaPredicted RBP6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 FRMD4BQ9Y2L6 1034 aa6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 NOC2LQ9Y3T9 749 aaKnown RBP6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 THSD7AQ9UPZ6 1657 aa6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 LRRC37AA6NMS7 1700 aa6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 ASTN1O14525 1302 aa6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 PFASO15067 1338 aa6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 SPATA31A6Q5VVP1 1343 aa6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 LTBP3Q9NS15 1303 aa6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 MYH4Q9Y623 1939 aa6.43□□□□□ -1.38
CHMP4A-210ENST00000552620 LTBP1Q14766 1721 aa6.43□□□□□ -1.38
CHMP4A-210ENST00000552620 ESYT3A0FGR9 886 aa6.43□□□□□ -1.38
CHMP4A-210ENST00000552620 GMNCA6NCL1 334 aa6.43□□□□□ -1.38
CHMP4A-210ENST00000552620 IQCA1LA6NCM1 817 aa6.43□□□□□ -1.38
CHMP4A-210ENST00000552620 ZSCAN5CA6NGD5 496 aaPredicted RBP6.43□□□□□ -1.38
CHMP4A-210ENST00000552620 F8VZ95 297 aa6.43□□□□□ -1.38
CHMP4A-210ENST00000552620 F8W735 103 aaPredicted RBP6.43□□□□□ -1.38
CHMP4A-210ENST00000552620 PODXLO00592 558 aa6.43□□□□□ -1.38
CHMP4A-210ENST00000552620 CLIC2O15247 247 aa6.43□□□□□ -1.38
CHMP4A-210ENST00000552620 MAPK13O15264 365 aa6.43□□□□□ -1.38
CHMP4A-210ENST00000552620 PMM2O15305 246 aa6.43□□□□□ -1.38
CHMP4A-210ENST00000552620 GAS2O43903 313 aaKnown RBP6.43□□□□□ -1.38
CHMP4A-210ENST00000552620 PPFIA2O75334 1257 aa6.43□□□□□ -1.38
CHMP4A-210ENST00000552620 PSMD10O75832 226 aa6.43□□□□□ -1.38
CHMP4A-210ENST00000552620 FSBPO95073 299 aa6.43□□□□□ -1.38
CHMP4A-210ENST00000552620 NDUFB10O96000 172 aa6.43□□□□□ -1.38
CHMP4A-210ENST00000552620 CST3P01034 146 aaPredicted RBP6.43□□□□□ -1.38
CHMP4A-210ENST00000552620 PAEPP09466 180 aa6.43□□□□□ -1.38
CHMP4A-210ENST00000552620 KRT13P13646 458 aa6.43□□□□□ -1.38
CHMP4A-210ENST00000552620 POLR2BP30876 1174 aaKnown RBP6.43□□□□□ -1.38
CHMP4A-210ENST00000552620 CTNNA1P35221 906 aaKnown RBP6.43□□□□□ -1.38
CHMP4A-210ENST00000552620 CASP4P49662 377 aa6.43□□□□□ -1.38
CHMP4A-210ENST00000552620 DNA2P51530 1060 aa6.43□□□□□ -1.38
CHMP4A-210ENST00000552620 RNASE9P60153 205 aaKnown RBP6.43□□□□□ -1.38
CHMP4A-210ENST00000552620 PTENP60484 403 aa6.43□□□□□ -1.38
CHMP4A-210ENST00000552620 PPP2R2AP63151 447 aa6.43□□□□□ -1.38
CHMP4A-210ENST00000552620 SETQ01105 290 aaPredicted RBP6.43□□□□□ -1.38
CHMP4A-210ENST00000552620 POU5F1Q01860 360 aaKnown RBP6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms