RNA–Protein interactions for RNA: ENST00000552162.5

RAB5C-209, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5C, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-209ENST00000552162 PCDHB6Q9Y5E3 794 aa17.74■□□□□ 0.43
RAB5C-209ENST00000552162 AXIN1O15169 862 aa17.73■□□□□ 0.43
RAB5C-209ENST00000552162 XPOTO43592 962 aaKnown RBP17.73■□□□□ 0.43
RAB5C-209ENST00000552162 EXTL3O43909 919 aa17.73■□□□□ 0.43
RAB5C-209ENST00000552162 TOB1P50616 345 aaPredicted RBP17.73■□□□□ 0.43
RAB5C-209ENST00000552162 CYP4F8P98187 520 aa17.73■□□□□ 0.43
RAB5C-209ENST00000552162 CACNB1Q02641 598 aaPredicted RBP17.73■□□□□ 0.43
RAB5C-209ENST00000552162 CCDC6Q16204 474 aa17.73■□□□□ 0.43
RAB5C-209ENST00000552162 IL17AQ16552 155 aa17.73■□□□□ 0.43
RAB5C-209ENST00000552162 GAB3Q8WWW8 586 aa17.73■□□□□ 0.43
RAB5C-209ENST00000552162 TMEM209Q96SK2 561 aa17.73■□□□□ 0.43
RAB5C-209ENST00000552162 LPIN3Q9BQK8 851 aa17.73■□□□□ 0.43
RAB5C-209ENST00000552162 MMTAG2Q9BU76 263 aaKnown RBP17.73■□□□□ 0.43
RAB5C-209ENST00000552162 KCNG1Q9UIX4 513 aa17.73■□□□□ 0.43
RAB5C-209ENST00000552162 CEP295Q9C0D2 2601 aa17.72■□□□□ 0.43
RAB5C-209ENST00000552162 EML5Q05BV3 1969 aa17.72■□□□□ 0.43
RAB5C-209ENST00000552162 LACTBL1A8MY62 500 aa17.72■□□□□ 0.43
RAB5C-209ENST00000552162 LAD1O00515 517 aa17.72■□□□□ 0.43
RAB5C-209ENST00000552162 PPEF2O14830 753 aa17.72■□□□□ 0.43
RAB5C-209ENST00000552162 RPP40O75818 363 aaKnown RBP17.72■□□□□ 0.43
RAB5C-209ENST00000552162 EPN2O95208 641 aa17.72■□□□□ 0.43
RAB5C-209ENST00000552162 ODC1P11926 461 aa17.72■□□□□ 0.43
RAB5C-209ENST00000552162 PMLP29590 882 aa17.72■□□□□ 0.43
RAB5C-209ENST00000552162 WEE1P30291 646 aa17.72■□□□□ 0.43
RAB5C-209ENST00000552162 PXNP49023 591 aaPredicted RBP17.72■□□□□ 0.43
RAB5C-209ENST00000552162 MCM2P49736 904 aa17.72■□□□□ 0.43
RAB5C-209ENST00000552162 ZRSR1Q15695 479 aaKnown RBP17.72■□□□□ 0.43
RAB5C-209ENST00000552162 ITPRIPL2Q3MIP1 535 aa17.72■□□□□ 0.43
RAB5C-209ENST00000552162 N4BP2L1Q5TBK1 243 aaPredicted RBP17.72■□□□□ 0.43
RAB5C-209ENST00000552162 ARMCX5Q6P1M9 558 aa17.72■□□□□ 0.43
RAB5C-209ENST00000552162 PKN3Q6P5Z2 889 aa17.72■□□□□ 0.43
RAB5C-209ENST00000552162 LOXL4Q96JB6 756 aa17.72■□□□□ 0.43
RAB5C-209ENST00000552162 SEPT5Q99719 369 aaPredicted RBP17.72■□□□□ 0.43
RAB5C-209ENST00000552162 TASP1Q9H6P5 420 aa17.72■□□□□ 0.43
RAB5C-209ENST00000552162 RXFP3Q9NSD7 469 aa17.72■□□□□ 0.43
RAB5C-209ENST00000552162 HSFX1Q9UBD0 423 aa17.72■□□□□ 0.43
RAB5C-209ENST00000552162 LIMCH1Q9UPQ0 1083 aa17.72■□□□□ 0.43
RAB5C-209ENST00000552162 FRYQ5TBA9 3013 aa17.72■□□□□ 0.43
RAB5C-209ENST00000552162 LAMA1P25391 3075 aa17.71■□□□□ 0.43
RAB5C-209ENST00000552162 ZNF806P0C7X5 589 aa17.71■□□□□ 0.43
RAB5C-209ENST00000552162 ATF6P18850 670 aa17.71■□□□□ 0.43
RAB5C-209ENST00000552162 U2AF2P26368 475 aaKnown RBP eCLIP17.71■□□□□ 0.43
RAB5C-209ENST00000552162 CDC25CP30307 473 aa17.71■□□□□ 0.43
RAB5C-209ENST00000552162 PRPHP41219 470 aa17.71■□□□□ 0.43
RAB5C-209ENST00000552162 RAP1GAPP47736 663 aa17.71■□□□□ 0.43
RAB5C-209ENST00000552162 LILRA4P59901 499 aa17.71■□□□□ 0.43
RAB5C-209ENST00000552162 HMGN5P82970 282 aaKnown RBP17.71■□□□□ 0.43
RAB5C-209ENST00000552162 VEPH1Q14D04 833 aa17.71■□□□□ 0.43
RAB5C-209ENST00000552162 ENOX2Q16206 610 aaKnown RBP17.71■□□□□ 0.43
RAB5C-209ENST00000552162 DTHD1Q6ZMT9 781 aa17.71■□□□□ 0.43
RAB5C-209ENST00000552162 CACNA2D4Q7Z3S7 1137 aa17.71■□□□□ 0.43
RAB5C-209ENST00000552162 KBTBD6Q86V97 674 aa17.71■□□□□ 0.43
RAB5C-209ENST00000552162 FAM184AQ8NB25 1140 aa17.71■□□□□ 0.43
RAB5C-209ENST00000552162 OR10T2Q8NGX3 314 aa17.71■□□□□ 0.43
RAB5C-209ENST00000552162 SENP8Q96LD8 212 aa17.71■□□□□ 0.43
RAB5C-209ENST00000552162 GCNAQ96QF7 691 aa17.71■□□□□ 0.43
RAB5C-209ENST00000552162 SMG9Q9H0W8 520 aaKnown RBP17.71■□□□□ 0.43
RAB5C-209ENST00000552162 THG1LQ9NWX6 298 aaKnown RBP17.71■□□□□ 0.43
RAB5C-209ENST00000552162 CCDC163A0A0D9SF12 145 aa17.7■□□□□ 0.42
RAB5C-209ENST00000552162 H0YCG3 227 aa17.7■□□□□ 0.42
RAB5C-209ENST00000552162 FAM189A1O60320 539 aa17.7■□□□□ 0.42
RAB5C-209ENST00000552162 CCDC192P0DO97 292 aa17.7■□□□□ 0.42
RAB5C-209ENST00000552162 LIG4P49917 911 aa17.7■□□□□ 0.42
RAB5C-209ENST00000552162 NCKAP1LP55160 1127 aa17.7■□□□□ 0.42
RAB5C-209ENST00000552162 PTPAQ15257 358 aa17.7■□□□□ 0.42
RAB5C-209ENST00000552162 KYAT1Q16773 422 aa17.7■□□□□ 0.42
RAB5C-209ENST00000552162 MGAT5BQ3V5L5 792 aa17.7■□□□□ 0.42
RAB5C-209ENST00000552162 SLC39A12Q504Y0 691 aa17.7■□□□□ 0.42
RAB5C-209ENST00000552162 SPATA1Q5VX52 437 aa17.7■□□□□ 0.42
RAB5C-209ENST00000552162 SYT2Q8N9I0 419 aaPredicted RBP17.7■□□□□ 0.42
RAB5C-209ENST00000552162 RPF1Q9H9Y2 349 aaKnown RBP17.7■□□□□ 0.42
RAB5C-209ENST00000552162 IL21Q9HBE4 155 aa17.7■□□□□ 0.42
RAB5C-209ENST00000552162 DENND4CQ5VZ89 1909 aa17.7■□□□□ 0.42
RAB5C-209ENST00000552162 TM4SF5O14894 197 aa17.69■□□□□ 0.42
RAB5C-209ENST00000552162 HNRNPDLO14979 420 aaKnown RBP17.69■□□□□ 0.42
RAB5C-209ENST00000552162 TUFMP49411 452 aaKnown RBP17.69■□□□□ 0.42
RAB5C-209ENST00000552162 CDR1P51861 262 aa17.69■□□□□ 0.42
RAB5C-209ENST00000552162 SLC12A3P55017 1021 aa17.69■□□□□ 0.42
RAB5C-209ENST00000552162 SHC2P98077 582 aa17.69■□□□□ 0.42
RAB5C-209ENST00000552162 GRSF1Q12849 480 aaKnown RBP eCLIP17.69■□□□□ 0.42
RAB5C-209ENST00000552162 TMEM196Q5HYL7 178 aa17.69■□□□□ 0.42
RAB5C-209ENST00000552162 HYIQ5T013 277 aa17.69■□□□□ 0.42
RAB5C-209ENST00000552162 STPG1Q5TH74 334 aa17.69■□□□□ 0.42
RAB5C-209ENST00000552162 JADE1Q6IE81 842 aa17.69■□□□□ 0.42
RAB5C-209ENST00000552162 FSTL4Q6MZW2 842 aa17.69■□□□□ 0.42
RAB5C-209ENST00000552162 PNMA5Q96PV4 448 aa17.69■□□□□ 0.42
RAB5C-209ENST00000552162 TSPAN18Q96SJ8 248 aa17.69■□□□□ 0.42
RAB5C-209ENST00000552162 KCND2Q9NZV8 630 aa17.69■□□□□ 0.42
RAB5C-209ENST00000552162 LARSQ9P2J5 1176 aaKnown RBP17.69■□□□□ 0.42
RAB5C-209ENST00000552162 SLC8A2Q9UPR5 921 aa17.69■□□□□ 0.42
RAB5C-209ENST00000552162 OBSL1O75147 1896 aa17.69■□□□□ 0.42
RAB5C-209ENST00000552162 TCHHQ07283 1943 aa17.68■□□□□ 0.42
RAB5C-209ENST00000552162 ATG2BQ96BY7 2078 aa17.68■□□□□ 0.42
RAB5C-209ENST00000552162 ZNF638Q14966 1978 aaKnown RBP17.68■□□□□ 0.42
RAB5C-209ENST00000552162 NPHP3-ACAD11A0A0J9YXS1 232 aa17.68■□□□□ 0.42
RAB5C-209ENST00000552162 OGTO15294 1046 aa17.68■□□□□ 0.42
RAB5C-209ENST00000552162 ATG13O75143 517 aa17.68■□□□□ 0.42
RAB5C-209ENST00000552162 AKAP3O75969 853 aa17.68■□□□□ 0.42
RAB5C-209ENST00000552162 CYP11A1P05108 521 aa17.68■□□□□ 0.42
RAB5C-209ENST00000552162 ADRB2P07550 413 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms