RNA–Protein interactions for RNA: ENST00000551920.1

GCN1-209, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-209ENST00000551920 POLIQ9UNA4 740 aa17.57■□□□□ 0.4
GCN1-209ENST00000551920 NME7Q9Y5B8 376 aa17.57■□□□□ 0.4
GCN1-209ENST00000551920 ARHGEF37A1IGU5 675 aa17.56■□□□□ 0.4
GCN1-209ENST00000551920 GABRDO14764 452 aa17.56■□□□□ 0.4
GCN1-209ENST00000551920 HUS1O60921 280 aa17.56■□□□□ 0.4
GCN1-209ENST00000551920 SEC24AO95486 1093 aa17.56■□□□□ 0.4
GCN1-209ENST00000551920 ASS1P00966 412 aaKnown RBP17.56■□□□□ 0.4
GCN1-209ENST00000551920 CPB1P15086 417 aa17.56■□□□□ 0.4
GCN1-209ENST00000551920 ATICP31939 592 aa17.56■□□□□ 0.4
GCN1-209ENST00000551920 MXI1P50539 228 aa17.56■□□□□ 0.4
GCN1-209ENST00000551920 CDR1P51861 262 aa17.56■□□□□ 0.4
GCN1-209ENST00000551920 ZNF699Q32M78 642 aa17.56■□□□□ 0.4
GCN1-209ENST00000551920 WDR72Q3MJ13 1102 aa17.56■□□□□ 0.4
GCN1-209ENST00000551920 TJAP1Q5JTD0 557 aa17.56■□□□□ 0.4
GCN1-209ENST00000551920 SPOPLQ6IQ16 392 aa17.56■□□□□ 0.4
GCN1-209ENST00000551920 CAVIN1Q6NZI2 390 aaKnown RBP17.56■□□□□ 0.4
GCN1-209ENST00000551920 IRF2BP1Q8IU81 584 aa17.56■□□□□ 0.4
GCN1-209ENST00000551920 ZNF461Q8TAF7 563 aa17.56■□□□□ 0.4
GCN1-209ENST00000551920 SLC7A14Q8TBB6 771 aa17.56■□□□□ 0.4
GCN1-209ENST00000551920 HDAC7Q8WUI4 952 aa17.56■□□□□ 0.4
GCN1-209ENST00000551920 SEMA4DQ92854 862 aa17.56■□□□□ 0.4
GCN1-209ENST00000551920 SYAP1Q96A49 352 aaPredicted RBP17.56■□□□□ 0.4
GCN1-209ENST00000551920 MRPL45Q9BRJ2 306 aaKnown RBP17.56■□□□□ 0.4
GCN1-209ENST00000551920 PI4K2AQ9BTU6 479 aa17.56■□□□□ 0.4
GCN1-209ENST00000551920 SRRTQ9BXP5 876 aaKnown RBP17.56■□□□□ 0.4
GCN1-209ENST00000551920 ADAM7Q9H2U9 754 aa17.56■□□□□ 0.4
GCN1-209ENST00000551920 CRISPLD1Q9H336 500 aa17.56■□□□□ 0.4
GCN1-209ENST00000551920 PLEKHA4Q9H4M7 779 aa17.56■□□□□ 0.4
GCN1-209ENST00000551920 SMYD3Q9H7B4 428 aa17.56■□□□□ 0.4
GCN1-209ENST00000551920 APOBEC3GQ9HC16 384 aaKnown RBP17.56■□□□□ 0.4
GCN1-209ENST00000551920 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.56■□□□□ 0.4
GCN1-209ENST00000551920 R3HCC1Q9Y3T6 440 aaKnown RBP17.56■□□□□ 0.4
GCN1-209ENST00000551920 ZMYND10O75800 440 aa17.55■□□□□ 0.4
GCN1-209ENST00000551920 C8AP07357 584 aa17.55■□□□□ 0.4
GCN1-209ENST00000551920 ATF2P15336 505 aa17.55■□□□□ 0.4
GCN1-209ENST00000551920 ACAT1P24752 427 aaKnown RBP17.55■□□□□ 0.4
GCN1-209ENST00000551920 GTF2H1P32780 548 aa17.55■□□□□ 0.4
GCN1-209ENST00000551920 SMAD2Q15796 467 aaKnown RBP17.55■□□□□ 0.4
GCN1-209ENST00000551920 CCDC40Q4G0X9 1142 aa17.55■□□□□ 0.4
GCN1-209ENST00000551920 TCERG1LQ5VWI1 586 aa17.55■□□□□ 0.4
GCN1-209ENST00000551920 SCARA5Q6ZMJ2 495 aa17.55■□□□□ 0.4
GCN1-209ENST00000551920 C11orf57Q6ZUT1 292 aaPredicted RBP17.55■□□□□ 0.4
GCN1-209ENST00000551920 FRMD5Q7Z6J6 570 aa17.55■□□□□ 0.4
GCN1-209ENST00000551920 LRRTM3Q86VH5 581 aa17.55■□□□□ 0.4
GCN1-209ENST00000551920 METTL23Q86XA0 190 aa17.55■□□□□ 0.4
GCN1-209ENST00000551920 TRIM59Q8IWR1 403 aa17.55■□□□□ 0.4
GCN1-209ENST00000551920 TMEM86AQ8N2M4 240 aa17.55■□□□□ 0.4
GCN1-209ENST00000551920 TTC9BQ8N6N2 239 aa17.55■□□□□ 0.4
GCN1-209ENST00000551920 CMASQ8NFW8 434 aaPredicted RBP17.55■□□□□ 0.4
GCN1-209ENST00000551920 PGLYRP2Q96PD5 576 aa17.55■□□□□ 0.4
GCN1-209ENST00000551920 PKMYT1Q99640 499 aa17.55■□□□□ 0.4
GCN1-209ENST00000551920 ZCWPW1Q9H0M4 648 aa17.55■□□□□ 0.4
GCN1-209ENST00000551920 SDCBP2Q9H190 292 aa17.55■□□□□ 0.4
GCN1-209ENST00000551920 DDX43Q9NXZ2 648 aaKnown RBP17.55■□□□□ 0.4
GCN1-209ENST00000551920 NXF1Q9UBU9 619 aaKnown RBP17.55■□□□□ 0.4
GCN1-209ENST00000551920 MTMR11A4FU01 709 aa17.54■□□□□ 0.4
GCN1-209ENST00000551920 RAP1GAPP47736 663 aa17.54■□□□□ 0.4
GCN1-209ENST00000551920 MARSP56192 900 aaKnown RBP17.54■□□□□ 0.4
GCN1-209ENST00000551920 TNNC1P63316 161 aa17.54■□□□□ 0.4
GCN1-209ENST00000551920 ITIH3Q06033 890 aa17.54■□□□□ 0.4
GCN1-209ENST00000551920 ADCY1Q08828 1119 aa17.54■□□□□ 0.4
GCN1-209ENST00000551920 GPR17Q13304 367 aa17.54■□□□□ 0.4
GCN1-209ENST00000551920 LIN9Q5TKA1 542 aa17.54■□□□□ 0.4
GCN1-209ENST00000551920 TPGS2Q68CL5 300 aa17.54■□□□□ 0.4
GCN1-209ENST00000551920 KRT39Q6A163 491 aa17.54■□□□□ 0.4
GCN1-209ENST00000551920 GPR149Q86SP6 731 aa17.54■□□□□ 0.4
GCN1-209ENST00000551920 NECAB3Q96P71 396 aaPredicted RBP17.54■□□□□ 0.4
GCN1-209ENST00000551920 MMS19Q96T76 1030 aa17.54■□□□□ 0.4
GCN1-209ENST00000551920 OXCT2Q9BYC2 517 aaPredicted RBP17.54■□□□□ 0.4
GCN1-209ENST00000551920 METTL14Q9HCE5 456 aaKnown RBP17.54■□□□□ 0.4
GCN1-209ENST00000551920 TMLHEQ9NVH6 421 aa17.54■□□□□ 0.4
GCN1-209ENST00000551920 ZDHHC7Q9NXF8 308 aa17.54■□□□□ 0.4
GCN1-209ENST00000551920 AFF4Q9UHB7 1163 aaKnown RBP17.54■□□□□ 0.4
GCN1-209ENST00000551920 MUC3AQ02505 3323 aa17.54■□□□□ 0.4
GCN1-209ENST00000551920 CCDC195A0A1B0GUA6 201 aa17.53■□□□□ 0.4
GCN1-209ENST00000551920 SPDYE4A6NLX3 237 aa17.53■□□□□ 0.4
GCN1-209ENST00000551920 WARSP23381 471 aaKnown RBP17.53■□□□□ 0.4
GCN1-209ENST00000551920 LMO2P25791 158 aa17.53■□□□□ 0.4
GCN1-209ENST00000551920 ERCC5P28715 1186 aaPredicted RBP17.53■□□□□ 0.4
GCN1-209ENST00000551920 ASPAP45381 313 aa17.53■□□□□ 0.4
GCN1-209ENST00000551920 CDH8P55286 799 aa17.53■□□□□ 0.4
GCN1-209ENST00000551920 NOP14P78316 857 aaKnown RBP17.53■□□□□ 0.4
GCN1-209ENST00000551920 CBX2Q14781 532 aaPredicted RBP17.53■□□□□ 0.4
GCN1-209ENST00000551920 KLHL40Q2TBA0 621 aa17.53■□□□□ 0.4
GCN1-209ENST00000551920 PUS10Q3MIT2 529 aaKnown RBP17.53■□□□□ 0.4
GCN1-209ENST00000551920 SLC39A12Q504Y0 691 aa17.53■□□□□ 0.4
GCN1-209ENST00000551920 ZNF667Q5HYK9 610 aa17.53■□□□□ 0.4
GCN1-209ENST00000551920 DPH6Q7L8W6 267 aa17.53■□□□□ 0.4
GCN1-209ENST00000551920 TCEAL8Q8IYN2 117 aa17.53■□□□□ 0.4
GCN1-209ENST00000551920 ATAD1Q8NBU5 361 aa17.53■□□□□ 0.4
GCN1-209ENST00000551920 SPATA18Q8TC71 538 aa17.53■□□□□ 0.4
GCN1-209ENST00000551920 CNOT6LQ96LI5 555 aaKnown RBP17.53■□□□□ 0.4
GCN1-209ENST00000551920 POMKQ9H5K3 350 aa17.53■□□□□ 0.4
GCN1-209ENST00000551920 INSL5Q9Y5Q6 135 aa17.53■□□□□ 0.4
GCN1-209ENST00000551920 CCL16O15467 120 aa17.52■□□□□ 0.4
GCN1-209ENST00000551920 ATP2C2O75185 946 aa17.52■□□□□ 0.4
GCN1-209ENST00000551920 TACC1O75410 805 aa17.52■□□□□ 0.4
GCN1-209ENST00000551920 GNA14O95837 355 aa17.52■□□□□ 0.4
GCN1-209ENST00000551920 HOXA9P31269 272 aa17.52■□□□□ 0.4
GCN1-209ENST00000551920 FMO5P49326 533 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms