RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 ADAM12O43184 909 aa11.41□□□□□ -0.58
PTCH1-225ENST00000551845 MBTPS2O43462 519 aa11.41□□□□□ -0.58
PTCH1-225ENST00000551845 GNA14O95837 355 aa11.41□□□□□ -0.58
PTCH1-225ENST00000551845 PTMSP20962 102 aa11.41□□□□□ -0.58
PTCH1-225ENST00000551845 GTF2H1P32780 548 aa11.41□□□□□ -0.58
PTCH1-225ENST00000551845 NLRP12P59046 1061 aa11.41□□□□□ -0.58
PTCH1-225ENST00000551845 MCCD1P59942 119 aaPredicted RBP11.41□□□□□ -0.58
PTCH1-225ENST00000551845 FOXK2Q01167 660 aa11.41□□□□□ -0.58
PTCH1-225ENST00000551845 SMAD2Q15796 467 aaKnown RBP11.41□□□□□ -0.58
PTCH1-225ENST00000551845 SGSM1Q2NKQ1 1148 aa11.41□□□□□ -0.58
PTCH1-225ENST00000551845 WDR72Q3MJ13 1102 aa11.41□□□□□ -0.58
PTCH1-225ENST00000551845 CT47A1Q5JQC4 288 aaPredicted RBP11.41□□□□□ -0.58
PTCH1-225ENST00000551845 WSCD1Q658N2 575 aa11.41□□□□□ -0.58
PTCH1-225ENST00000551845 TPGS2Q68CL5 300 aa11.41□□□□□ -0.58
PTCH1-225ENST00000551845 SCARA3Q6AZY7 606 aa11.41□□□□□ -0.58
PTCH1-225ENST00000551845 TTI2Q6NXR4 508 aa11.41□□□□□ -0.58
PTCH1-225ENST00000551845 SYCE2Q6PIF2 218 aa11.41□□□□□ -0.58
PTCH1-225ENST00000551845 RSPO2Q6UXX9 243 aaPredicted RBP11.41□□□□□ -0.58
PTCH1-225ENST00000551845 CCDC149Q6ZUS6 474 aa11.41□□□□□ -0.58
PTCH1-225ENST00000551845 SV2AQ7L0J3 742 aa11.41□□□□□ -0.58
PTCH1-225ENST00000551845 RTL10Q7L3V2 364 aa11.41□□□□□ -0.58
PTCH1-225ENST00000551845 BMP8AQ7Z5Y6 402 aa11.41□□□□□ -0.58
PTCH1-225ENST00000551845 FRMD5Q7Z6J6 570 aa11.41□□□□□ -0.58
PTCH1-225ENST00000551845 ZC3H3Q8IXZ2 948 aaKnown RBP11.41□□□□□ -0.58
PTCH1-225ENST00000551845 TMEM86AQ8N2M4 240 aa11.41□□□□□ -0.58
PTCH1-225ENST00000551845 TOP6BLQ8N6T0 577 aa11.41□□□□□ -0.58
PTCH1-225ENST00000551845 FAM84AQ96KN4 292 aa11.41□□□□□ -0.58
PTCH1-225ENST00000551845 MMS19Q96T76 1030 aa11.41□□□□□ -0.58
PTCH1-225ENST00000551845 APOL5Q9BWW9 433 aa11.41□□□□□ -0.58
PTCH1-225ENST00000551845 SRRTQ9BXP5 876 aaKnown RBP11.41□□□□□ -0.58
PTCH1-225ENST00000551845 GZF1Q9H116 711 aaPredicted RBP11.41□□□□□ -0.58
PTCH1-225ENST00000551845 S1PR5Q9H228 398 aa11.41□□□□□ -0.58
PTCH1-225ENST00000551845 SFXN1Q9H9B4 322 aa11.41□□□□□ -0.58
PTCH1-225ENST00000551845 MAN1C1Q9NR34 630 aa11.41□□□□□ -0.58
PTCH1-225ENST00000551845 ARMCX3Q9UH62 379 aaPredicted RBP11.41□□□□□ -0.58
PTCH1-225ENST00000551845 RWDD2AQ9UIY3 292 aa11.41□□□□□ -0.58
PTCH1-225ENST00000551845 MAFFQ9ULX9 164 aa11.41□□□□□ -0.58
PTCH1-225ENST00000551845 CTNND2Q9UQB3 1225 aa11.41□□□□□ -0.58
PTCH1-225ENST00000551845 CCDC195A0A1B0GUA6 201 aa11.4□□□□□ -0.58
PTCH1-225ENST00000551845 ABLIM3O94929 683 aa11.4□□□□□ -0.58
PTCH1-225ENST00000551845 CLSTN1O94985 981 aa11.4□□□□□ -0.58
PTCH1-225ENST00000551845 STAU1O95793 577 aaKnown RBP11.4□□□□□ -0.58
PTCH1-225ENST00000551845 CPB1P15086 417 aa11.4□□□□□ -0.58
PTCH1-225ENST00000551845 ATF2P15336 505 aa11.4□□□□□ -0.58
PTCH1-225ENST00000551845 ERCC5P28715 1186 aaPredicted RBP11.4□□□□□ -0.58
PTCH1-225ENST00000551845 GCLMP48507 274 aa11.4□□□□□ -0.58
PTCH1-225ENST00000551845 LHX1P48742 406 aa11.4□□□□□ -0.58
PTCH1-225ENST00000551845 MYL6P60660 151 aa11.4□□□□□ -0.58
PTCH1-225ENST00000551845 ROR1Q01973 937 aa11.4□□□□□ -0.58
PTCH1-225ENST00000551845 SMARCB1Q12824 385 aa11.4□□□□□ -0.58
PTCH1-225ENST00000551845 TCF15Q12870 199 aa11.4□□□□□ -0.58
PTCH1-225ENST00000551845 GPR17Q13304 367 aa11.4□□□□□ -0.58
PTCH1-225ENST00000551845 SMAD4Q13485 552 aaKnown RBP11.4□□□□□ -0.58
PTCH1-225ENST00000551845 NCOA4Q13772 614 aa11.4□□□□□ -0.58
PTCH1-225ENST00000551845 TPD52L1Q16890 204 aaPredicted RBP11.4□□□□□ -0.58
PTCH1-225ENST00000551845 ZACNQ401N2 412 aa11.4□□□□□ -0.58
PTCH1-225ENST00000551845 CCDC40Q4G0X9 1142 aa11.4□□□□□ -0.58
PTCH1-225ENST00000551845 RARS2Q5T160 578 aaKnown RBP11.4□□□□□ -0.58
PTCH1-225ENST00000551845 LIN9Q5TKA1 542 aa11.4□□□□□ -0.58
PTCH1-225ENST00000551845 TCERG1LQ5VWI1 586 aa11.4□□□□□ -0.58
PTCH1-225ENST00000551845 TDRD10Q5VZ19 366 aaKnown RBP11.4□□□□□ -0.58
PTCH1-225ENST00000551845 KRT39Q6A163 491 aa11.4□□□□□ -0.58
PTCH1-225ENST00000551845 SASS6Q6UVJ0 657 aa11.4□□□□□ -0.58
PTCH1-225ENST00000551845 CYP26C1Q6V0L0 522 aa11.4□□□□□ -0.58
PTCH1-225ENST00000551845 TRIM67Q6ZTA4 783 aa11.4□□□□□ -0.58
PTCH1-225ENST00000551845 CREBRFQ8IUR6 639 aa11.4□□□□□ -0.58
PTCH1-225ENST00000551845 C12orf76Q8N812 135 aaPredicted RBP11.4□□□□□ -0.58
PTCH1-225ENST00000551845 SMRP1Q8NCR6 262 aa11.4□□□□□ -0.58
PTCH1-225ENST00000551845 CCDC150Q8NCX0 1101 aa11.4□□□□□ -0.58
PTCH1-225ENST00000551845 SPATA18Q8TC71 538 aa11.4□□□□□ -0.58
PTCH1-225ENST00000551845 TAF4BQ92750 862 aa11.4□□□□□ -0.58
PTCH1-225ENST00000551845 RIPOR3Q96MK2 946 aa11.4□□□□□ -0.58
PTCH1-225ENST00000551845 DUSP9Q99956 384 aaKnown RBP11.4□□□□□ -0.58
PTCH1-225ENST00000551845 MMRN2Q9H8L6 949 aa11.4□□□□□ -0.58
PTCH1-225ENST00000551845 PRRG1O14668 218 aa11.39□□□□□ -0.59
PTCH1-225ENST00000551845 ZMYND10O75800 440 aa11.39□□□□□ -0.59
PTCH1-225ENST00000551845 TRIM49P0CI25 452 aa11.39□□□□□ -0.59
PTCH1-225ENST00000551845 TRIM49CP0CI26 452 aa11.39□□□□□ -0.59
PTCH1-225ENST00000551845 P4HA1P13674 534 aa11.39□□□□□ -0.59
PTCH1-225ENST00000551845 MTHFRP42898 656 aa11.39□□□□□ -0.59
PTCH1-225ENST00000551845 TNNC1P63316 161 aa11.39□□□□□ -0.59
PTCH1-225ENST00000551845 MYL7Q01449 175 aa11.39□□□□□ -0.59
PTCH1-225ENST00000551845 PPP3CAQ08209 521 aa11.39□□□□□ -0.59
PTCH1-225ENST00000551845 SOWAHAQ2M3V2 549 aa11.39□□□□□ -0.59
PTCH1-225ENST00000551845 DCAF17Q5H9S7 520 aaPredicted RBP11.39□□□□□ -0.59
PTCH1-225ENST00000551845 ZNF667Q5HYK9 610 aa11.39□□□□□ -0.59
PTCH1-225ENST00000551845 PPM1LQ5SGD2 360 aa11.39□□□□□ -0.59
PTCH1-225ENST00000551845 C1orf220Q5T0J3 134 aa11.39□□□□□ -0.59
PTCH1-225ENST00000551845 CCDC183Q5T5S1 534 aa11.39□□□□□ -0.59
PTCH1-225ENST00000551845 TMC5Q6UXY8 1006 aa11.39□□□□□ -0.59
PTCH1-225ENST00000551845 C15orf39Q6ZRI6 1047 aa11.39□□□□□ -0.59
PTCH1-225ENST00000551845 GPR149Q86SP6 731 aa11.39□□□□□ -0.59
PTCH1-225ENST00000551845 DCP1BQ8IZD4 617 aaKnown RBP11.39□□□□□ -0.59
PTCH1-225ENST00000551845 PDCL2Q8N4E4 241 aa11.39□□□□□ -0.59
PTCH1-225ENST00000551845 CMASQ8NFW8 434 aaPredicted RBP11.39□□□□□ -0.59
PTCH1-225ENST00000551845 ATOH1Q92858 354 aaPredicted RBP11.39□□□□□ -0.59
PTCH1-225ENST00000551845 NECTIN4Q96NY8 510 aa11.39□□□□□ -0.59
PTCH1-225ENST00000551845 ACBD6Q9BR61 282 aa11.39□□□□□ -0.59
PTCH1-225ENST00000551845 IMPG2Q9BZV3 1241 aa11.39□□□□□ -0.59
PTCH1-225ENST00000551845 VRTNQ9H8Y1 702 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms