RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 MUTP22033 750 aa16.66■□□□□ 0.26
CACNB3-220ENST00000551716 RPA1P27694 616 aa16.66■□□□□ 0.26
CACNB3-220ENST00000551716 GALK1P51570 392 aa16.66■□□□□ 0.26
CACNB3-220ENST00000551716 DGKEP52429 567 aa16.66■□□□□ 0.26
CACNB3-220ENST00000551716 IRX4P78413 519 aa16.66■□□□□ 0.26
CACNB3-220ENST00000551716 STK3Q13188 491 aa16.66■□□□□ 0.26
CACNB3-220ENST00000551716 DMC1Q14565 340 aa16.66■□□□□ 0.26
CACNB3-220ENST00000551716 PDCD11Q14690 1871 aaKnown RBP16.66■□□□□ 0.26
CACNB3-220ENST00000551716 TAF12Q16514 161 aa16.66■□□□□ 0.26
CACNB3-220ENST00000551716 CMTM8Q8IZV2 173 aa16.66■□□□□ 0.26
CACNB3-220ENST00000551716 RBM19Q9Y4C8 960 aaKnown RBP16.66■□□□□ 0.26
CACNB3-220ENST00000551716 LAMA1P25391 3075 aa16.66■□□□□ 0.26
CACNB3-220ENST00000551716 MEFVO15553 781 aaPredicted RBP16.65■□□□□ 0.26
CACNB3-220ENST00000551716 MED24O75448 989 aa16.65■□□□□ 0.26
CACNB3-220ENST00000551716 PAX3P23760 479 aa16.65■□□□□ 0.26
CACNB3-220ENST00000551716 DDX6P26196 483 aaKnown RBP eCLIP16.65■□□□□ 0.26
CACNB3-220ENST00000551716 AVPR1AP37288 418 aa16.65■□□□□ 0.26
CACNB3-220ENST00000551716 DPP6P42658 865 aa16.65■□□□□ 0.26
CACNB3-220ENST00000551716 PDGFRLQ15198 375 aa16.65■□□□□ 0.26
CACNB3-220ENST00000551716 ATAD1Q8NBU5 361 aa16.65■□□□□ 0.26
CACNB3-220ENST00000551716 RPLP0P6Q8NHW5 317 aa16.65■□□□□ 0.26
CACNB3-220ENST00000551716 NUSAP1Q9BXS6 441 aaKnown RBP16.65■□□□□ 0.26
CACNB3-220ENST00000551716 SLC46A2Q9BY10 475 aa16.65■□□□□ 0.26
CACNB3-220ENST00000551716 CRISPLD1Q9H336 500 aa16.65■□□□□ 0.26
CACNB3-220ENST00000551716 EBF3Q9H4W6 596 aa16.65■□□□□ 0.26
CACNB3-220ENST00000551716 KIF9Q9HAQ2 790 aa16.65■□□□□ 0.26
CACNB3-220ENST00000551716 PLEKHA5Q9HAU0 1116 aa16.65■□□□□ 0.26
CACNB3-220ENST00000551716 HPS4Q9NQG7 708 aa16.65■□□□□ 0.26
CACNB3-220ENST00000551716 ANKFY1Q9P2R3 1169 aa16.65■□□□□ 0.26
CACNB3-220ENST00000551716 DMXL2Q8TDJ6 3036 aa16.64■□□□□ 0.26
CACNB3-220ENST00000551716 CCDC169A6NNP5 214 aa16.64■□□□□ 0.25
CACNB3-220ENST00000551716 UPK3BL1B0FP48 263 aa16.64■□□□□ 0.25
CACNB3-220ENST00000551716 UPK3BL2E5RIL1 263 aa16.64■□□□□ 0.25
CACNB3-220ENST00000551716 REC8O95072 547 aa16.64■□□□□ 0.25
CACNB3-220ENST00000551716 OR4Q2P0C623 313 aa16.64■□□□□ 0.25
CACNB3-220ENST00000551716 TYMPP19971 482 aa16.64■□□□□ 0.25
CACNB3-220ENST00000551716 BFSP1Q12934 665 aa16.64■□□□□ 0.25
CACNB3-220ENST00000551716 NR5A1Q13285 461 aa16.64■□□□□ 0.25
CACNB3-220ENST00000551716 OVOS1Q6IE37 1185 aa16.64■□□□□ 0.25
CACNB3-220ENST00000551716 KIAA1211LQ6NV74 962 aa16.64■□□□□ 0.25
CACNB3-220ENST00000551716 MPZL3Q6UWV2 235 aa16.64■□□□□ 0.25
CACNB3-220ENST00000551716 DSTYKQ6XUX3 929 aa16.64■□□□□ 0.25
CACNB3-220ENST00000551716 PROSER1Q86XN7 944 aa16.64■□□□□ 0.25
CACNB3-220ENST00000551716 TSTD1Q8NFU3 115 aa16.64■□□□□ 0.25
CACNB3-220ENST00000551716 TNFRSF25Q93038 417 aa16.64■□□□□ 0.25
CACNB3-220ENST00000551716 GJB4Q9NTQ9 266 aa16.64■□□□□ 0.25
CACNB3-220ENST00000551716 KCNG1Q9UIX4 513 aa16.64■□□□□ 0.25
CACNB3-220ENST00000551716 TIMM13Q9Y5L4 95 aaPredicted RBP16.64■□□□□ 0.25
CACNB3-220ENST00000551716 MTMR11A4FU01 709 aa16.63■□□□□ 0.25
CACNB3-220ENST00000551716 FAM205CA6NFA0 338 aa16.63■□□□□ 0.25
CACNB3-220ENST00000551716 CYP3A5P20815 502 aa16.63■□□□□ 0.25
CACNB3-220ENST00000551716 PROZP22891 400 aa16.63■□□□□ 0.25
CACNB3-220ENST00000551716 LRPAP1P30533 357 aa16.63■□□□□ 0.25
CACNB3-220ENST00000551716 AARSP49588 968 aaKnown RBP eCLIP16.63■□□□□ 0.25
CACNB3-220ENST00000551716 SIM1P81133 766 aaPredicted RBP16.63■□□□□ 0.25
CACNB3-220ENST00000551716 CPA6Q8N4T0 437 aa16.63■□□□□ 0.25
CACNB3-220ENST00000551716 TARS2Q9BW92 718 aaKnown RBP16.63■□□□□ 0.25
CACNB3-220ENST00000551716 TM6SF1Q9BZW5 370 aa16.63■□□□□ 0.25
CACNB3-220ENST00000551716 FBRSL1Q9HCM7 1045 aaKnown RBP16.63■□□□□ 0.25
CACNB3-220ENST00000551716 TDP1Q9NUW8 608 aa16.63■□□□□ 0.25
CACNB3-220ENST00000551716 POLR3BQ9NW08 1133 aaPredicted RBP16.63■□□□□ 0.25
CACNB3-220ENST00000551716 KLK13Q9UKR3 277 aa16.63■□□□□ 0.25
CACNB3-220ENST00000551716 TBX20Q9UMR3 447 aa16.63■□□□□ 0.25
CACNB3-220ENST00000551716 FLNBO75369 2602 aaKnown RBP16.62■□□□□ 0.25
CACNB3-220ENST00000551716 OTOL1A6NHN0 477 aaPredicted RBP16.62■□□□□ 0.25
CACNB3-220ENST00000551716 XPOTO43592 962 aaKnown RBP16.62■□□□□ 0.25
CACNB3-220ENST00000551716 NPTX2P47972 431 aa16.62■□□□□ 0.25
CACNB3-220ENST00000551716 DHPSP49366 369 aaPredicted RBP16.62■□□□□ 0.25
CACNB3-220ENST00000551716 PEX3P56589 373 aa16.62■□□□□ 0.25
CACNB3-220ENST00000551716 CYP4F8P98187 520 aa16.62■□□□□ 0.25
CACNB3-220ENST00000551716 SMARCB1Q12824 385 aa16.62■□□□□ 0.25
CACNB3-220ENST00000551716 DMP1Q13316 513 aaPredicted RBP16.62■□□□□ 0.25
CACNB3-220ENST00000551716 HNRNPDQ14103 355 aaKnown RBP16.62■□□□□ 0.25
CACNB3-220ENST00000551716 SLC10A6Q3KNW5 377 aa16.62■□□□□ 0.25
CACNB3-220ENST00000551716 SOWAHCQ53LP3 525 aaPredicted RBP16.62■□□□□ 0.25
CACNB3-220ENST00000551716 HAUS3Q68CZ6 603 aa16.62■□□□□ 0.25
CACNB3-220ENST00000551716 PIGKQ92643 395 aa16.62■□□□□ 0.25
CACNB3-220ENST00000551716 CD101Q93033 1021 aa16.62■□□□□ 0.25
CACNB3-220ENST00000551716 CHFRQ96EP1 664 aa16.62■□□□□ 0.25
CACNB3-220ENST00000551716 TSPAN18Q96SJ8 248 aa16.62■□□□□ 0.25
CACNB3-220ENST00000551716 LARP6Q9BRS8 491 aaKnown RBP16.62■□□□□ 0.25
CACNB3-220ENST00000551716 SMG9Q9H0W8 520 aaKnown RBP16.62■□□□□ 0.25
CACNB3-220ENST00000551716 IL21Q9HBE4 155 aa16.62■□□□□ 0.25
CACNB3-220ENST00000551716 GPSM3Q9Y4H4 160 aa16.62■□□□□ 0.25
CACNB3-220ENST00000551716 AKAP13Q12802 2813 aa16.62■□□□□ 0.25
CACNB3-220ENST00000551716 SETXQ7Z333 2677 aaKnown RBP16.62■□□□□ 0.25
CACNB3-220ENST00000551716 PATE3B3GLJ2 98 aa16.61■□□□□ 0.25
CACNB3-220ENST00000551716 TNFRSF10BO14763 440 aa16.61■□□□□ 0.25
CACNB3-220ENST00000551716 TOM1L1O75674 476 aa16.61■□□□□ 0.25
CACNB3-220ENST00000551716 GJA4P35212 333 aa16.61■□□□□ 0.25
CACNB3-220ENST00000551716 SCRN1Q12765 414 aa16.61■□□□□ 0.25
CACNB3-220ENST00000551716 NR1H3Q13133 447 aa16.61■□□□□ 0.25
CACNB3-220ENST00000551716 PSMD2Q13200 908 aa16.61■□□□□ 0.25
CACNB3-220ENST00000551716 ZNF268Q14587 947 aaPredicted RBP16.61■□□□□ 0.25
CACNB3-220ENST00000551716 ZNF423Q2M1K9 1284 aa16.61■□□□□ 0.25
CACNB3-220ENST00000551716 TRIM61Q5EBN2 209 aa16.61■□□□□ 0.25
CACNB3-220ENST00000551716 SPDYCQ5MJ68 293 aa16.61■□□□□ 0.25
CACNB3-220ENST00000551716 LMBRD2Q68DH5 695 aaPredicted RBP16.61■□□□□ 0.25
CACNB3-220ENST00000551716 TRIM68Q6AZZ1 485 aa16.61■□□□□ 0.25
CACNB3-220ENST00000551716 LPCAT2Q7L5N7 544 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms