RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 PDCD2LQ9BRP1 358 aa6.48□□□□□ -1.37
SCAF11-213ENST00000550629 ARHGAP39Q9C0H5 1083 aa6.48□□□□□ -1.37
SCAF11-213ENST00000550629 EPN3Q9H201 632 aa6.48□□□□□ -1.37
SCAF11-213ENST00000550629 TMEM260Q9NX78 707 aa6.48□□□□□ -1.37
SCAF11-213ENST00000550629 CHMP5Q9NZZ3 219 aa6.48□□□□□ -1.37
SCAF11-213ENST00000550629 SIT1Q9Y3P8 196 aa6.48□□□□□ -1.37
SCAF11-213ENST00000550629 MORC2Q9Y6X9 1032 aaPredicted RBP6.48□□□□□ -1.37
SCAF11-213ENST00000550629 MYH6P13533 1939 aa6.48□□□□□ -1.37
SCAF11-213ENST00000550629 ASTN1O14525 1302 aa6.48□□□□□ -1.37
SCAF11-213ENST00000550629 PCNTO95613 3336 aa6.47□□□□□ -1.37
SCAF11-213ENST00000550629 BAZ2BQ9UIF8 2168 aaKnown RBP6.47□□□□□ -1.37
SCAF11-213ENST00000550629 KIF28PB7ZC32 967 aa6.47□□□□□ -1.37
SCAF11-213ENST00000550629 LAD1O00515 517 aa6.47□□□□□ -1.37
SCAF11-213ENST00000550629 ADAMTS3O15072 1205 aa6.47□□□□□ -1.37
SCAF11-213ENST00000550629 FOXN1O15353 648 aa6.47□□□□□ -1.37
SCAF11-213ENST00000550629 MEFVO15553 781 aaPredicted RBP6.47□□□□□ -1.37
SCAF11-213ENST00000550629 CPP00450 1065 aa6.47□□□□□ -1.37
SCAF11-213ENST00000550629 ASGR2P07307 311 aa6.47□□□□□ -1.37
SCAF11-213ENST00000550629 HSPA1AP0DMV8 641 aaKnown RBP6.47□□□□□ -1.37
SCAF11-213ENST00000550629 HSPA1BP0DMV9 641 aaKnown RBP6.47□□□□□ -1.37
SCAF11-213ENST00000550629 TGFB3P10600 412 aa6.47□□□□□ -1.37
SCAF11-213ENST00000550629 SETQ01105 290 aaPredicted RBP6.47□□□□□ -1.37
SCAF11-213ENST00000550629 VMACQ2NL98 169 aa6.47□□□□□ -1.37
SCAF11-213ENST00000550629 Q4G0T1 1027 aa6.47□□□□□ -1.37
SCAF11-213ENST00000550629 CEP55Q53EZ4 464 aa6.47□□□□□ -1.37
SCAF11-213ENST00000550629 MFSD14CQ5VZR4 134 aa6.47□□□□□ -1.37
SCAF11-213ENST00000550629 DENND5AQ6IQ26 1287 aa6.47□□□□□ -1.37
SCAF11-213ENST00000550629 DBX2Q6ZNG2 339 aa6.47□□□□□ -1.37
SCAF11-213ENST00000550629 PIK3AP1Q6ZUJ8 805 aa6.47□□□□□ -1.37
SCAF11-213ENST00000550629 OTOP1Q7RTM1 612 aa6.47□□□□□ -1.37
SCAF11-213ENST00000550629 TMEM145Q8NBT3 493 aa6.47□□□□□ -1.37
SCAF11-213ENST00000550629 CXorf38Q8TB03 319 aa6.47□□□□□ -1.37
SCAF11-213ENST00000550629 TBCKQ8TEA7 893 aa6.47□□□□□ -1.37
SCAF11-213ENST00000550629 DIO2Q92813 273 aa6.47□□□□□ -1.37
SCAF11-213ENST00000550629 CCDC140Q96MF4 163 aa6.47□□□□□ -1.37
SCAF11-213ENST00000550629 ZNF396Q96N95 335 aaPredicted RBP6.47□□□□□ -1.37
SCAF11-213ENST00000550629 INPP4AQ96PE3 977 aaPredicted RBP6.47□□□□□ -1.37
SCAF11-213ENST00000550629 XYLT2Q9H1B5 865 aa6.47□□□□□ -1.37
SCAF11-213ENST00000550629 ABHD16BQ9H3Z7 469 aa6.47□□□□□ -1.37
SCAF11-213ENST00000550629 VTA1Q9NP79 307 aa6.47□□□□□ -1.37
SCAF11-213ENST00000550629 NUDT5Q9UKK9 219 aa6.47□□□□□ -1.37
SCAF11-213ENST00000550629 CNPY2Q9Y2B0 182 aa6.47□□□□□ -1.37
SCAF11-213ENST00000550629 UBIAD1Q9Y5Z9 338 aa6.47□□□□□ -1.37
SCAF11-213ENST00000550629 PLXNB2O15031 1838 aa6.47□□□□□ -1.37
SCAF11-213ENST00000550629 CASP8AP2Q9UKL3 1982 aa6.46□□□□□ -1.37
SCAF11-213ENST00000550629 IGLV3-22A0A075B6J6 115 aa6.46□□□□□ -1.38
SCAF11-213ENST00000550629 A0A1W2PQU0 124 aa6.46□□□□□ -1.38
SCAF11-213ENST00000550629 C22orf46C9J442 243 aa6.46□□□□□ -1.38
SCAF11-213ENST00000550629 AGRPO00253 132 aa6.46□□□□□ -1.38
SCAF11-213ENST00000550629 TBX3O15119 743 aa6.46□□□□□ -1.38
SCAF11-213ENST00000550629 FIBPO43427 364 aa6.46□□□□□ -1.38
SCAF11-213ENST00000550629 ADCY3O60266 1144 aa6.46□□□□□ -1.38
SCAF11-213ENST00000550629 HMGCRP04035 888 aa6.46□□□□□ -1.38
SCAF11-213ENST00000550629 NCAM1P13591 858 aa6.46□□□□□ -1.38
SCAF11-213ENST00000550629 PMLP29590 882 aa6.46□□□□□ -1.38
SCAF11-213ENST00000550629 ICAM3P32942 547 aa6.46□□□□□ -1.38
SCAF11-213ENST00000550629 MC3RP41968 323 aa6.46□□□□□ -1.38
SCAF11-213ENST00000550629 TOB1P50616 345 aaPredicted RBP6.46□□□□□ -1.38
SCAF11-213ENST00000550629 RPL11P62913 178 aaKnown RBP6.46□□□□□ -1.38
SCAF11-213ENST00000550629 PPP2R2AP63151 447 aa6.46□□□□□ -1.38
SCAF11-213ENST00000550629 MRPS9P82933 396 aaKnown RBP6.46□□□□□ -1.38
SCAF11-213ENST00000550629 MTMR1Q13613 665 aa6.46□□□□□ -1.38
SCAF11-213ENST00000550629 PKP1Q13835 747 aa6.46□□□□□ -1.38
SCAF11-213ENST00000550629 RAB33AQ14088 237 aa6.46□□□□□ -1.38
SCAF11-213ENST00000550629 EARS2Q5JPH6 523 aaKnown RBP6.46□□□□□ -1.38
SCAF11-213ENST00000550629 MAP3K21Q5TCX8 1036 aa6.46□□□□□ -1.38
SCAF11-213ENST00000550629 ARMCX2Q7L311 632 aa6.46□□□□□ -1.38
SCAF11-213ENST00000550629 CTU1Q7Z7A3 348 aaKnown RBP6.46□□□□□ -1.38
SCAF11-213ENST00000550629 FERMT3Q86UX7 667 aa6.46□□□□□ -1.38
SCAF11-213ENST00000550629 PPIL6Q8IXY8 311 aa6.46□□□□□ -1.38
SCAF11-213ENST00000550629 GIMAP8Q8ND71 665 aaPredicted RBP6.46□□□□□ -1.38
SCAF11-213ENST00000550629 IL31RAQ8NI17 732 aa6.46□□□□□ -1.38
SCAF11-213ENST00000550629 RAET1EQ8TD07 263 aa6.46□□□□□ -1.38
SCAF11-213ENST00000550629 SCFD2Q8WU76 684 aa6.46□□□□□ -1.38
SCAF11-213ENST00000550629 C1orf159Q96HA4 380 aa6.46□□□□□ -1.38
SCAF11-213ENST00000550629 FAM20AQ96MK3 541 aa6.46□□□□□ -1.38
SCAF11-213ENST00000550629 MXRA8Q9BRK3 442 aa6.46□□□□□ -1.38
SCAF11-213ENST00000550629 RNF38Q9H0F5 515 aa6.46□□□□□ -1.38
SCAF11-213ENST00000550629 JADE2Q9NQC1 790 aa6.46□□□□□ -1.38
SCAF11-213ENST00000550629 CFAP45Q9UL16 551 aa6.46□□□□□ -1.38
SCAF11-213ENST00000550629 PTPN22Q9Y2R2 807 aa6.46□□□□□ -1.38
SCAF11-213ENST00000550629 ZDHHC9Q9Y397 364 aa6.46□□□□□ -1.38
SCAF11-213ENST00000550629 TRIM17Q9Y577 477 aa6.46□□□□□ -1.38
SCAF11-213ENST00000550629 TIMM13Q9Y5L4 95 aaPredicted RBP6.46□□□□□ -1.38
SCAF11-213ENST00000550629 MGAMO43451 1857 aa6.45□□□□□ -1.38
SCAF11-213ENST00000550629 OTOL1A6NHN0 477 aaPredicted RBP6.45□□□□□ -1.38
SCAF11-213ENST00000550629 FAM86B1E9PN63 330 aa6.45□□□□□ -1.38
SCAF11-213ENST00000550629 NKRFO15226 690 aaKnown RBP eCLIP6.45□□□□□ -1.38
SCAF11-213ENST00000550629 EDIL3O43854 480 aa6.45□□□□□ -1.38
SCAF11-213ENST00000550629 NEMFO60524 1076 aa6.45□□□□□ -1.38
SCAF11-213ENST00000550629 CCNT1O60563 726 aaKnown RBP6.45□□□□□ -1.38
SCAF11-213ENST00000550629 SNAI1O95863 264 aaPredicted RBP6.45□□□□□ -1.38
SCAF11-213ENST00000550629 CELA3BP08861 270 aa6.45□□□□□ -1.38
SCAF11-213ENST00000550629 FAM86B2P0C5J1 330 aa6.45□□□□□ -1.38
SCAF11-213ENST00000550629 MYCLP12524 364 aaPredicted RBP6.45□□□□□ -1.38
SCAF11-213ENST00000550629 LCP1P13796 627 aa6.45□□□□□ -1.38
SCAF11-213ENST00000550629 CAPN2P17655 700 aa6.45□□□□□ -1.38
SCAF11-213ENST00000550629 CYP2B6P20813 491 aa6.45□□□□□ -1.38
SCAF11-213ENST00000550629 FPR2P25090 351 aa6.45□□□□□ -1.38
SCAF11-213ENST00000550629 PRPHP41219 470 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms