RNA–Protein interactions for RNA: ENST00000550411.5

CBX5-204, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-204ENST00000550411 ZNF396Q96N95 335 aaPredicted RBP7.48□□□□□ -1.21
CBX5-204ENST00000550411 CCDC94Q9BW85 323 aaPredicted RBP7.48□□□□□ -1.21
CBX5-204ENST00000550411 BCO2Q9BYV7 579 aa7.48□□□□□ -1.21
CBX5-204ENST00000550411 PANK2Q9BZ23 570 aa7.48□□□□□ -1.21
CBX5-204ENST00000550411 PCDHA7Q9UN72 937 aa7.48□□□□□ -1.21
CBX5-204ENST00000550411 STYXL1Q9Y6J8 313 aa7.48□□□□□ -1.21
CBX5-204ENST00000550411 MED19A0JLT2 244 aaPredicted RBP7.47□□□□□ -1.21
CBX5-204ENST00000550411 H0YCG3 227 aa7.47□□□□□ -1.21
CBX5-204ENST00000550411 OGTO15294 1046 aa7.47□□□□□ -1.21
CBX5-204ENST00000550411 KRT18P05783 430 aaKnown RBP7.47□□□□□ -1.21
CBX5-204ENST00000550411 CLTAP09496 248 aa7.47□□□□□ -1.21
CBX5-204ENST00000550411 TKTP29401 623 aaKnown RBP7.47□□□□□ -1.21
CBX5-204ENST00000550411 CASP1P29466 404 aa7.47□□□□□ -1.21
CBX5-204ENST00000550411 OR1D2P34982 312 aa7.47□□□□□ -1.21
CBX5-204ENST00000550411 TXLNAP40222 546 aa7.47□□□□□ -1.21
CBX5-204ENST00000550411 MAGEA9P43362 315 aa7.47□□□□□ -1.21
CBX5-204ENST00000550411 BRCC3P46736 316 aa7.47□□□□□ -1.21
CBX5-204ENST00000550411 LIG4P49917 911 aa7.47□□□□□ -1.21
CBX5-204ENST00000550411 PFKPQ01813 784 aa7.47□□□□□ -1.21
CBX5-204ENST00000550411 SPAG1Q07617 926 aa7.47□□□□□ -1.21
CBX5-204ENST00000550411 EHHADHQ08426 723 aa7.47□□□□□ -1.21
CBX5-204ENST00000550411 RAB33AQ14088 237 aa7.47□□□□□ -1.21
CBX5-204ENST00000550411 UBXN2BQ14CS0 331 aa7.47□□□□□ -1.21
CBX5-204ENST00000550411 ZBTB6Q15916 424 aa7.47□□□□□ -1.21
CBX5-204ENST00000550411 UVSSAQ2YD98 709 aa7.47□□□□□ -1.21
CBX5-204ENST00000550411 SLC44A4Q53GD3 710 aa7.47□□□□□ -1.21
CBX5-204ENST00000550411 TMEM164Q5U3C3 297 aa7.47□□□□□ -1.21
CBX5-204ENST00000550411 DESI1Q6ICB0 168 aa7.47□□□□□ -1.21
CBX5-204ENST00000550411 CNNM4Q6P4Q7 775 aa7.47□□□□□ -1.21
CBX5-204ENST00000550411 CRELD2Q6UXH1 353 aaPredicted RBP7.47□□□□□ -1.21
CBX5-204ENST00000550411 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.47□□□□□ -1.21
CBX5-204ENST00000550411 CCDC73Q6ZRK6 1079 aa7.47□□□□□ -1.21
CBX5-204ENST00000550411 SV2BQ7L1I2 683 aa7.47□□□□□ -1.21
CBX5-204ENST00000550411 ZNF720Q7Z2F6 126 aa7.47□□□□□ -1.21
CBX5-204ENST00000550411 GRAMD1CQ8IYS0 662 aa7.47□□□□□ -1.21
CBX5-204ENST00000550411 MAML2Q8IZL2 1156 aaPredicted RBP7.47□□□□□ -1.21
CBX5-204ENST00000550411 SUMF1Q8NBK3 374 aa7.47□□□□□ -1.21
CBX5-204ENST00000550411 ITFG1Q8TB96 612 aa7.47□□□□□ -1.21
CBX5-204ENST00000550411 SLC7A14Q8TBB6 771 aa7.47□□□□□ -1.21
CBX5-204ENST00000550411 LEO1Q8WVC0 666 aaPredicted RBP7.47□□□□□ -1.21
CBX5-204ENST00000550411 BICD1Q96G01 975 aa7.47□□□□□ -1.21
CBX5-204ENST00000550411 ACAP3Q96P50 834 aa7.47□□□□□ -1.21
CBX5-204ENST00000550411 KXD1Q9BQD3 176 aa7.47□□□□□ -1.21
CBX5-204ENST00000550411 DDX23Q9BUQ8 820 aaKnown RBP7.47□□□□□ -1.21
CBX5-204ENST00000550411 SLC4A5Q9BY07 1137 aa7.47□□□□□ -1.21
CBX5-204ENST00000550411 OSBPL6Q9BZF3 934 aa7.47□□□□□ -1.21
CBX5-204ENST00000550411 TRIM9Q9C026 710 aa7.47□□□□□ -1.21
CBX5-204ENST00000550411 ZHX3Q9H4I2 956 aa7.47□□□□□ -1.21
CBX5-204ENST00000550411 LTB4R2Q9NPC1 389 aa7.47□□□□□ -1.21
CBX5-204ENST00000550411 OLFML3Q9NRN5 406 aa7.47□□□□□ -1.21
CBX5-204ENST00000550411 TOPORSQ9NS56 1045 aaPredicted RBP7.47□□□□□ -1.21
CBX5-204ENST00000550411 KBTBD4Q9NVX7 518 aa7.47□□□□□ -1.21
CBX5-204ENST00000550411 SPATA6Q9NWH7 488 aaPredicted RBP7.47□□□□□ -1.21
CBX5-204ENST00000550411 HCFC1R1Q9NWW0 138 aa7.47□□□□□ -1.21
CBX5-204ENST00000550411 DNMT3BQ9UBC3 853 aaKnown RBP7.47□□□□□ -1.21
CBX5-204ENST00000550411 CCDC39Q9UFE4 941 aa7.47□□□□□ -1.21
CBX5-204ENST00000550411 CPSF3Q9UKF6 684 aaKnown RBP7.47□□□□□ -1.21
CBX5-204ENST00000550411 RCOR1Q9UKL0 485 aa7.47□□□□□ -1.21
CBX5-204ENST00000550411 FBXO4Q9UKT5 387 aa7.47□□□□□ -1.21
CBX5-204ENST00000550411 MTF2Q9Y483 593 aaPredicted RBP7.47□□□□□ -1.21
CBX5-204ENST00000550411 EPG5Q9HCE0 2579 aa7.47□□□□□ -1.21
CBX5-204ENST00000550411 CHD8Q9HCK8 2581 aa7.47□□□□□ -1.21
CBX5-204ENST00000550411 SHROOM3Q8TF72 1996 aa7.46□□□□□ -1.21
CBX5-204ENST00000550411 FAM170BA6NMN3 283 aa7.46□□□□□ -1.22
CBX5-204ENST00000550411 LACTBL1A8MY62 500 aa7.46□□□□□ -1.22
CBX5-204ENST00000550411 PODXLO00592 558 aa7.46□□□□□ -1.22
CBX5-204ENST00000550411 NCAM2O15394 837 aa7.46□□□□□ -1.22
CBX5-204ENST00000550411 CLDN3O15551 220 aa7.46□□□□□ -1.22
CBX5-204ENST00000550411 ACTN4O43707 911 aaKnown RBP7.46□□□□□ -1.22
CBX5-204ENST00000550411 TBC1D4O60343 1298 aa7.46□□□□□ -1.22
CBX5-204ENST00000550411 RNF40O75150 1001 aa7.46□□□□□ -1.22
CBX5-204ENST00000550411 HSP90AA1P07900 732 aaKnown RBP7.46□□□□□ -1.22
CBX5-204ENST00000550411 NFICP08651 508 aa7.46□□□□□ -1.22
CBX5-204ENST00000550411 POU2F2P09086 479 aa7.46□□□□□ -1.22
CBX5-204ENST00000550411 GAP43P17677 238 aa7.46□□□□□ -1.22
CBX5-204ENST00000550411 CD72P21854 359 aa7.46□□□□□ -1.22
CBX5-204ENST00000550411 SCP2P22307 547 aa7.46□□□□□ -1.22
CBX5-204ENST00000550411 LRPAP1P30533 357 aa7.46□□□□□ -1.22
CBX5-204ENST00000550411 AARSP49588 968 aaKnown RBP eCLIP7.46□□□□□ -1.22
CBX5-204ENST00000550411 PABPC1LQ4VXU2 614 aaKnown RBP7.46□□□□□ -1.22
CBX5-204ENST00000550411 VARS2Q5ST30 1063 aaKnown RBP7.46□□□□□ -1.22
CBX5-204ENST00000550411 L1TD1Q5T7N2 865 aaKnown RBP7.46□□□□□ -1.22
CBX5-204ENST00000550411 DMRTA1Q5VZB9 504 aa7.46□□□□□ -1.22
CBX5-204ENST00000550411 SCARA3Q6AZY7 606 aa7.46□□□□□ -1.22
CBX5-204ENST00000550411 TPRG1Q6ZUI0 275 aa7.46□□□□□ -1.22
CBX5-204ENST00000550411 RTL10Q7L3V2 364 aa7.46□□□□□ -1.22
CBX5-204ENST00000550411 EPM2AIP1Q7L775 607 aaPredicted RBP7.46□□□□□ -1.22
CBX5-204ENST00000550411 APBB1IPQ7Z5R6 666 aaPredicted RBP7.46□□□□□ -1.22
CBX5-204ENST00000550411 NPAS3Q8IXF0 933 aa7.46□□□□□ -1.22
CBX5-204ENST00000550411 EFCAB13Q8IY85 973 aa7.46□□□□□ -1.22
CBX5-204ENST00000550411 ING5Q8WYH8 240 aa7.46□□□□□ -1.22
CBX5-204ENST00000550411 DHX58Q96C10 678 aa7.46□□□□□ -1.22
CBX5-204ENST00000550411 HVCN1Q96D96 273 aa7.46□□□□□ -1.22
CBX5-204ENST00000550411 MCRS1Q96EZ8 462 aa7.46□□□□□ -1.22
CBX5-204ENST00000550411 UROC1Q96N76 676 aa7.46□□□□□ -1.22
CBX5-204ENST00000550411 NELL2Q99435 816 aa7.46□□□□□ -1.22
CBX5-204ENST00000550411 TCHPQ9BT92 498 aa7.46□□□□□ -1.22
CBX5-204ENST00000550411 MSTO1Q9BUK6 570 aa7.46□□□□□ -1.22
CBX5-204ENST00000550411 TNMDQ9H2S6 317 aa7.46□□□□□ -1.22
CBX5-204ENST00000550411 DLL3Q9NYJ7 618 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms