RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 TUBGCP4Q9UGJ1 667 aa22.24■■□□□ 1.15
PRDM4-205ENST00000550376 SNX24Q9Y343 169 aa22.24■■□□□ 1.15
PRDM4-205ENST00000550376 F8VP50 259 aa22.24■■□□□ 1.15
PRDM4-205ENST00000550376 PI4K2BG5E9Z4 385 aa22.24■■□□□ 1.15
PRDM4-205ENST00000550376 RNF40O75150 1001 aa22.24■■□□□ 1.15
PRDM4-205ENST00000550376 C6orf222P0C671 652 aaPredicted RBP22.24■■□□□ 1.15
PRDM4-205ENST00000550376 RGS2P41220 211 aa22.24■■□□□ 1.15
PRDM4-205ENST00000550376 C1QBPQ07021 282 aaKnown RBP22.24■■□□□ 1.15
PRDM4-205ENST00000550376 ERICH1Q86X53 443 aa22.24■■□□□ 1.15
PRDM4-205ENST00000550376 CCDC50Q8IVM0 306 aa22.24■■□□□ 1.15
PRDM4-205ENST00000550376 C12orf29Q8N999 325 aa22.24■■□□□ 1.15
PRDM4-205ENST00000550376 TMEM35BQ8NCS4 154 aa22.24■■□□□ 1.15
PRDM4-205ENST00000550376 RUBCNQ92622 972 aa22.24■■□□□ 1.15
PRDM4-205ENST00000550376 CAVIN3Q969G5 261 aa22.24■■□□□ 1.15
PRDM4-205ENST00000550376 ADAM21Q9UKJ8 722 aa22.24■■□□□ 1.15
PRDM4-205ENST00000550376 TRIP11Q15643 1979 aa22.23■■□□□ 1.15
PRDM4-205ENST00000550376 FAM155AB1AL88 458 aaPredicted RBP22.23■■□□□ 1.15
PRDM4-205ENST00000550376 PGK1P00558 417 aa22.23■■□□□ 1.15
PRDM4-205ENST00000550376 SLC10A3P09131 477 aa22.23■■□□□ 1.15
PRDM4-205ENST00000550376 TRIM32Q13049 653 aa22.23■■□□□ 1.15
PRDM4-205ENST00000550376 SIX1Q15475 284 aaPredicted RBP22.23■■□□□ 1.15
PRDM4-205ENST00000550376 UBA3Q8TBC4 463 aa22.23■■□□□ 1.15
PRDM4-205ENST00000550376 FEZF2Q8TBJ5 459 aa22.23■■□□□ 1.15
PRDM4-205ENST00000550376 HEXIM2Q96MH2 286 aaKnown RBP22.23■■□□□ 1.15
PRDM4-205ENST00000550376 LPIN3Q9BQK8 851 aa22.23■■□□□ 1.15
PRDM4-205ENST00000550376 ZFYVE28Q9HCC9 887 aa22.23■■□□□ 1.15
PRDM4-205ENST00000550376 PARVAQ9NVD7 372 aa22.23■■□□□ 1.15
PRDM4-205ENST00000550376 GABRQQ9UN88 632 aa22.23■■□□□ 1.15
PRDM4-205ENST00000550376 UTP11Q9Y3A2 253 aaKnown RBP22.23■■□□□ 1.15
PRDM4-205ENST00000550376 DARSP14868 501 aaKnown RBP22.23■■□□□ 1.15
PRDM4-205ENST00000550376 ZNF252P-AS1Q0IIN9 211 aa22.23■■□□□ 1.15
PRDM4-205ENST00000550376 FSCN1Q16658 493 aaKnown RBP22.23■■□□□ 1.15
PRDM4-205ENST00000550376 PTPN20Q4JDL3 420 aa22.23■■□□□ 1.15
PRDM4-205ENST00000550376 TXNRD3NBQ6F5E7 133 aa22.23■■□□□ 1.15
PRDM4-205ENST00000550376 CCDC137Q6PK04 289 aaKnown RBP22.23■■□□□ 1.15
PRDM4-205ENST00000550376 DDX27Q96GQ7 796 aaKnown RBP22.23■■□□□ 1.15
PRDM4-205ENST00000550376 ZIM3Q96PE6 472 aa22.23■■□□□ 1.15
PRDM4-205ENST00000550376 PIN4Q9Y237 131 aaKnown RBP22.23■■□□□ 1.15
PRDM4-205ENST00000550376 MBLAC1A4D2B0 266 aaPredicted RBP22.22■■□□□ 1.15
PRDM4-205ENST00000550376 KRT14P02533 472 aa22.22■■□□□ 1.15
PRDM4-205ENST00000550376 EIF4BP23588 611 aaKnown RBP22.22■■□□□ 1.15
PRDM4-205ENST00000550376 GABPB1Q06547 395 aaPredicted RBP22.22■■□□□ 1.15
PRDM4-205ENST00000550376 JAMLQ86YT9 394 aa22.22■■□□□ 1.15
PRDM4-205ENST00000550376 RNF25Q96BH1 459 aaPredicted RBP22.22■■□□□ 1.15
PRDM4-205ENST00000550376 MRPL47Q9HD33 250 aaKnown RBP22.22■■□□□ 1.15
PRDM4-205ENST00000550376 HCRTO43612 131 aa22.22■■□□□ 1.15
PRDM4-205ENST00000550376 AARSP49588 968 aaKnown RBP eCLIP22.22■■□□□ 1.15
PRDM4-205ENST00000550376 CAP1Q01518 475 aa22.22■■□□□ 1.15
PRDM4-205ENST00000550376 ZFYVE27Q5T4F4 411 aa22.22■■□□□ 1.15
PRDM4-205ENST00000550376 DCUN1D2Q6PH85 259 aa22.22■■□□□ 1.15
PRDM4-205ENST00000550376 SESTD1Q86VW0 696 aa22.22■■□□□ 1.15
PRDM4-205ENST00000550376 TRIM6Q9C030 488 aaPredicted RBP22.22■■□□□ 1.15
PRDM4-205ENST00000550376 ACBD3Q9H3P7 528 aa22.22■■□□□ 1.15
PRDM4-205ENST00000550376 PHF2O75151 1096 aa22.21■■□□□ 1.15
PRDM4-205ENST00000550376 GRM5P41594 1212 aa22.21■■□□□ 1.15
PRDM4-205ENST00000550376 NDST1P52848 882 aa22.21■■□□□ 1.15
PRDM4-205ENST00000550376 ADAM17P78536 824 aa22.21■■□□□ 1.15
PRDM4-205ENST00000550376 DNAJC24Q6P3W2 148 aa22.21■■□□□ 1.15
PRDM4-205ENST00000550376 SLC27A1Q6PCB7 646 aa22.21■■□□□ 1.15
PRDM4-205ENST00000550376 CCDC105Q8IYK2 499 aa22.21■■□□□ 1.15
PRDM4-205ENST00000550376 OR2W6PQ8NHA6 318 aa22.21■■□□□ 1.15
PRDM4-205ENST00000550376 PIK3R5Q8WYR1 880 aa22.21■■□□□ 1.15
PRDM4-205ENST00000550376 VCPIP1Q96JH7 1222 aa22.21■■□□□ 1.15
PRDM4-205ENST00000550376 CPXM1Q96SM3 734 aa22.21■■□□□ 1.15
PRDM4-205ENST00000550376 APBA2Q99767 749 aa22.21■■□□□ 1.15
PRDM4-205ENST00000550376 CHST7Q9NS84 486 aa22.21■■□□□ 1.15
PRDM4-205ENST00000550376 R3HDM2Q9Y2K5 976 aaKnown RBP22.21■■□□□ 1.15
PRDM4-205ENST00000550376 SMIM35A0A1B0GVV1 85 aa22.21■■□□□ 1.15
PRDM4-205ENST00000550376 CILPO75339 1184 aa22.21■■□□□ 1.15
PRDM4-205ENST00000550376 PTGIRP43119 386 aa22.21■■□□□ 1.15
PRDM4-205ENST00000550376 CPT1AP50416 773 aa22.21■■□□□ 1.15
PRDM4-205ENST00000550376 PPARDQ03181 441 aa22.21■■□□□ 1.15
PRDM4-205ENST00000550376 SNX17Q15036 470 aa22.21■■□□□ 1.15
PRDM4-205ENST00000550376 CXCL17Q6UXB2 119 aa22.21■■□□□ 1.15
PRDM4-205ENST00000550376 TMEM176AQ96HP8 235 aa22.21■■□□□ 1.15
PRDM4-205ENST00000550376 SNX9Q9Y5X1 595 aa22.21■■□□□ 1.15
PRDM4-205ENST00000550376 TMEM191CA6NGB0 347 aa22.2■■□□□ 1.14
PRDM4-205ENST00000550376 RALAP11233 206 aa22.2■■□□□ 1.14
PRDM4-205ENST00000550376 PTPN11Q06124 597 aaPredicted RBP22.2■■□□□ 1.14
PRDM4-205ENST00000550376 GNASQ5JWF2 1037 aa22.2■■□□□ 1.14
PRDM4-205ENST00000550376 EMC1Q8N766 993 aa22.2■■□□□ 1.14
PRDM4-205ENST00000550376 ARL8AQ96BM9 186 aa22.2■■□□□ 1.14
PRDM4-205ENST00000550376 GOLGA2P5Q9HBQ8 144 aa22.2■■□□□ 1.14
PRDM4-205ENST00000550376 RECQL4O94761 1208 aa22.2■■□□□ 1.14
PRDM4-205ENST00000550376 RFC1P35251 1148 aaPredicted RBP22.2■■□□□ 1.14
PRDM4-205ENST00000550376 RBP5P82980 135 aa22.2■■□□□ 1.14
PRDM4-205ENST00000550376 ADCY2Q08462 1091 aa22.2■■□□□ 1.14
PRDM4-205ENST00000550376 C7orf31Q8N865 590 aa22.2■■□□□ 1.14
PRDM4-205ENST00000550376 JOSD2Q8TAC2 188 aa22.2■■□□□ 1.14
PRDM4-205ENST00000550376 ERP44Q9BS26 406 aa22.2■■□□□ 1.14
PRDM4-205ENST00000550376 FAM204AQ9H8W3 233 aa22.2■■□□□ 1.14
PRDM4-205ENST00000550376 BHMG1C9JSJ3 638 aaPredicted RBP22.19■■□□□ 1.14
PRDM4-205ENST00000550376 HAS3O00219 553 aa22.19■■□□□ 1.14
PRDM4-205ENST00000550376 KRT10P13645 584 aa22.19■■□□□ 1.14
PRDM4-205ENST00000550376 PSMC4P43686 418 aa22.19■■□□□ 1.14
PRDM4-205ENST00000550376 PLTPP55058 493 aa22.19■■□□□ 1.14
PRDM4-205ENST00000550376 PURAQ00577 322 aaKnown RBP22.19■■□□□ 1.14
PRDM4-205ENST00000550376 TRIP13Q15645 432 aaPredicted RBP22.19■■□□□ 1.14
PRDM4-205ENST00000550376 KAZNQ674X7 775 aa22.19■■□□□ 1.14
PRDM4-205ENST00000550376 FAM71BQ8TC56 605 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms