RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 MCL1Q07820 350 aa8.31□□□□□ -1.08
NEK3-201ENST00000550331 UBXN2BQ14CS0 331 aa8.31□□□□□ -1.08
NEK3-201ENST00000550331 SLC10A6Q3KNW5 377 aa8.31□□□□□ -1.08
NEK3-201ENST00000550331 CTXN3Q4LDR2 81 aa8.31□□□□□ -1.08
NEK3-201ENST00000550331 ZBTB41Q5SVQ8 909 aa8.31□□□□□ -1.08
NEK3-201ENST00000550331 ZNF852Q6ZMS4 543 aa8.31□□□□□ -1.08
NEK3-201ENST00000550331 TPRG1Q6ZUI0 275 aa8.31□□□□□ -1.08
NEK3-201ENST00000550331 KCNK18Q7Z418 384 aa8.31□□□□□ -1.08
NEK3-201ENST00000550331 APPL2Q8NEU8 664 aa8.31□□□□□ -1.08
NEK3-201ENST00000550331 DNASE1L2Q92874 299 aa8.31□□□□□ -1.08
NEK3-201ENST00000550331 C18orf25Q96B23 403 aaPredicted RBP8.31□□□□□ -1.08
NEK3-201ENST00000550331 CLDN23Q96B33 292 aa8.31□□□□□ -1.08
NEK3-201ENST00000550331 MCRS1Q96EZ8 462 aa8.31□□□□□ -1.08
NEK3-201ENST00000550331 TSPAN18Q96SJ8 248 aa8.31□□□□□ -1.08
NEK3-201ENST00000550331 RTKNQ9BST9 563 aa8.31□□□□□ -1.08
NEK3-201ENST00000550331 PLEKHA5Q9HAU0 1116 aa8.31□□□□□ -1.08
NEK3-201ENST00000550331 LTB4R2Q9NPC1 389 aa8.31□□□□□ -1.08
NEK3-201ENST00000550331 LARSQ9P2J5 1176 aaKnown RBP8.31□□□□□ -1.08
NEK3-201ENST00000550331 AFF4Q9UHB7 1163 aaKnown RBP8.31□□□□□ -1.08
NEK3-201ENST00000550331 FBXL5Q9UKA1 691 aa8.31□□□□□ -1.08
NEK3-201ENST00000550331 MRPS17Q9Y2R5 130 aaKnown RBP8.31□□□□□ -1.08
NEK3-201ENST00000550331 PCDHGA2Q9Y5H1 932 aa8.31□□□□□ -1.08
NEK3-201ENST00000550331 INSL5Q9Y5Q6 135 aa8.31□□□□□ -1.08
NEK3-201ENST00000550331 SFI1A8K8P3 1242 aa8.3□□□□□ -1.08
NEK3-201ENST00000550331 M0QZQ0 153 aa8.3□□□□□ -1.08
NEK3-201ENST00000550331 CLDN3O15551 220 aa8.3□□□□□ -1.08
NEK3-201ENST00000550331 SLC26A4O43511 780 aa8.3□□□□□ -1.08
NEK3-201ENST00000550331 OAZ2O95190 189 aa8.3□□□□□ -1.08
NEK3-201ENST00000550331 SEC24AO95486 1093 aa8.3□□□□□ -1.08
NEK3-201ENST00000550331 CYP3A5P20815 502 aa8.3□□□□□ -1.08
NEK3-201ENST00000550331 FCARP24071 287 aa8.3□□□□□ -1.08
NEK3-201ENST00000550331 LRPAP1P30533 357 aa8.3□□□□□ -1.08
NEK3-201ENST00000550331 RPS9P46781 194 aaKnown RBP8.3□□□□□ -1.08
NEK3-201ENST00000550331 EPHA5P54756 1037 aa8.3□□□□□ -1.08
NEK3-201ENST00000550331 ARPP19P56211 112 aa8.3□□□□□ -1.08
NEK3-201ENST00000550331 YWHAHQ04917 246 aaPredicted RBP8.3□□□□□ -1.08
NEK3-201ENST00000550331 RABEP1Q15276 862 aa8.3□□□□□ -1.08
NEK3-201ENST00000550331 KYAT1Q16773 422 aa8.3□□□□□ -1.08
NEK3-201ENST00000550331 FAM78AQ5JUQ0 283 aa8.3□□□□□ -1.08
NEK3-201ENST00000550331 CYP4A22Q5TCH4 519 aa8.3□□□□□ -1.08
NEK3-201ENST00000550331 ARL6IP4Q66PJ3 421 aaKnown RBP8.3□□□□□ -1.08
NEK3-201ENST00000550331 TANGO2Q6ICL3 276 aa8.3□□□□□ -1.08
NEK3-201ENST00000550331 IQCEQ6IPM2 695 aa8.3□□□□□ -1.08
NEK3-201ENST00000550331 PDZD4Q76G19 769 aaPredicted RBP8.3□□□□□ -1.08
NEK3-201ENST00000550331 METTL3Q86U44 580 aaKnown RBP8.3□□□□□ -1.08
NEK3-201ENST00000550331 ELMOD1Q8N336 334 aa8.3□□□□□ -1.08
NEK3-201ENST00000550331 BEST2Q8NFU1 509 aa8.3□□□□□ -1.08
NEK3-201ENST00000550331 CDK5RAP3Q96JB5 506 aa8.3□□□□□ -1.08
NEK3-201ENST00000550331 ZBTB45Q96K62 511 aaPredicted RBP8.3□□□□□ -1.08
NEK3-201ENST00000550331 AK8Q96MA6 479 aa8.3□□□□□ -1.08
NEK3-201ENST00000550331 TBC1D32Q96NH3 1257 aa8.3□□□□□ -1.08
NEK3-201ENST00000550331 ASB16Q96NS5 453 aa8.3□□□□□ -1.08
NEK3-201ENST00000550331 PNMA5Q96PV4 448 aa8.3□□□□□ -1.08
NEK3-201ENST00000550331 SPOCK3Q9BQ16 436 aa8.3□□□□□ -1.08
NEK3-201ENST00000550331 CORO1BQ9BR76 489 aa8.3□□□□□ -1.08
NEK3-201ENST00000550331 PLA2G2FQ9BZM2 168 aa8.3□□□□□ -1.08
NEK3-201ENST00000550331 ZFP14Q9HCL3 533 aa8.3□□□□□ -1.08
NEK3-201ENST00000550331 TRPV5Q9NQA5 729 aa8.3□□□□□ -1.08
NEK3-201ENST00000550331 TUBGCP4Q9UGJ1 667 aa8.3□□□□□ -1.08
NEK3-201ENST00000550331 ODF2LQ9ULJ1 636 aa8.3□□□□□ -1.08
NEK3-201ENST00000550331 UBQLN1Q9UMX0 589 aaKnown RBP8.3□□□□□ -1.08
NEK3-201ENST00000550331 MTF2Q9Y483 593 aaPredicted RBP8.3□□□□□ -1.08
NEK3-201ENST00000550331 TTC26A0AVF1 554 aa8.29□□□□□ -1.08
NEK3-201ENST00000550331 VWA3AA6NCI4 1184 aa8.29□□□□□ -1.08
NEK3-201ENST00000550331 MAN2B1O00754 1011 aa8.29□□□□□ -1.08
NEK3-201ENST00000550331 XPOTO43592 962 aaKnown RBP8.29□□□□□ -1.08
NEK3-201ENST00000550331 CLTAP09496 248 aa8.29□□□□□ -1.08
NEK3-201ENST00000550331 PLA2G4BP0C869 781 aa8.29□□□□□ -1.08
NEK3-201ENST00000550331 CXCL8P10145 99 aa8.29□□□□□ -1.08
NEK3-201ENST00000550331 CPB1P15086 417 aa8.29□□□□□ -1.08
NEK3-201ENST00000550331 CD72P21854 359 aa8.29□□□□□ -1.08
NEK3-201ENST00000550331 TARSP26639 723 aaKnown RBP8.29□□□□□ -1.08
NEK3-201ENST00000550331 MARCKSP29966 332 aaPredicted RBP8.29□□□□□ -1.08
NEK3-201ENST00000550331 CCR2P41597 374 aa8.29□□□□□ -1.08
NEK3-201ENST00000550331 AARSP49588 968 aaKnown RBP eCLIP8.29□□□□□ -1.08
NEK3-201ENST00000550331 NCKAP1LP55160 1127 aa8.29□□□□□ -1.08
NEK3-201ENST00000550331 PPP2R3AQ06190 1150 aa8.29□□□□□ -1.08
NEK3-201ENST00000550331 ADCY1Q08828 1119 aa8.29□□□□□ -1.08
NEK3-201ENST00000550331 RAD51AP2Q09MP3 1159 aa8.29□□□□□ -1.08
NEK3-201ENST00000550331 TWF1Q12792 350 aa8.29□□□□□ -1.08
NEK3-201ENST00000550331 PLD1Q13393 1074 aa8.29□□□□□ -1.08
NEK3-201ENST00000550331 ZRSR1Q15695 479 aaKnown RBP8.29□□□□□ -1.08
NEK3-201ENST00000550331 ZBTB6Q15916 424 aa8.29□□□□□ -1.08
NEK3-201ENST00000550331 C8orf34Q49A92 452 aa8.29□□□□□ -1.08
NEK3-201ENST00000550331 TMEM119Q4V9L6 283 aa8.29□□□□□ -1.08
NEK3-201ENST00000550331 SEZ6Q53EL9 994 aa8.29□□□□□ -1.08
NEK3-201ENST00000550331 PPM1JQ5JR12 505 aa8.29□□□□□ -1.08
NEK3-201ENST00000550331 MCTP1Q6DN14 999 aa8.29□□□□□ -1.08
NEK3-201ENST00000550331 HAUS6Q7Z4H7 955 aa8.29□□□□□ -1.08
NEK3-201ENST00000550331 ZBTB44Q8NCP5 570 aa8.29□□□□□ -1.08
NEK3-201ENST00000550331 DEPDC1BQ8WUY9 529 aa8.29□□□□□ -1.08
NEK3-201ENST00000550331 NELL1Q92832 810 aa8.29□□□□□ -1.08
NEK3-201ENST00000550331 SMARCD2Q92925 531 aa8.29□□□□□ -1.08
NEK3-201ENST00000550331 TCEAL4Q96EI5 215 aa8.29□□□□□ -1.08
NEK3-201ENST00000550331 ZNF512Q96ME7 567 aaPredicted RBP8.29□□□□□ -1.08
NEK3-201ENST00000550331 USB1Q9BQ65 265 aaKnown RBP8.29□□□□□ -1.08
NEK3-201ENST00000550331 IER2Q9BTL4 223 aa8.29□□□□□ -1.08
NEK3-201ENST00000550331 TRMT61BQ9BVS5 477 aaKnown RBP8.29□□□□□ -1.08
NEK3-201ENST00000550331 FAM126AQ9BYI3 521 aaPredicted RBP8.29□□□□□ -1.08
NEK3-201ENST00000550331 GPR88Q9GZN0 384 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms