RNA–Protein interactions for RNA: ENST00000549220.5

EFCAB2-215, Transcript of EF-hand calcium binding domain 2, humanhuman

TSL 4

Gene EFCAB2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB2-215ENST00000549220 PANK2Q9BZ23 570 aa6.51□□□□□ -1.37
EFCAB2-215ENST00000549220 CELF4Q9BZC1 486 aaKnown RBP6.51□□□□□ -1.37
EFCAB2-215ENST00000549220 MTIF3Q9H2K0 278 aaKnown RBP6.51□□□□□ -1.37
EFCAB2-215ENST00000549220 ZSCAN16Q9H4T2 348 aaPredicted RBP6.51□□□□□ -1.37
EFCAB2-215ENST00000549220 SUCLA2Q9P2R7 463 aaPredicted RBP6.51□□□□□ -1.37
EFCAB2-215ENST00000549220 SLC4A7Q9Y6M7 1214 aa6.51□□□□□ -1.37
EFCAB2-215ENST00000549220 MYH10P35580 1976 aa6.51□□□□□ -1.37
EFCAB2-215ENST00000549220 TCF20Q9UGU0 1960 aaKnown RBP6.5□□□□□ -1.37
EFCAB2-215ENST00000549220 A0A087WZ62 844 aa6.5□□□□□ -1.37
EFCAB2-215ENST00000549220 MAFO75444 373 aaPredicted RBP6.5□□□□□ -1.37
EFCAB2-215ENST00000549220 RPS6KA5O75582 802 aa6.5□□□□□ -1.37
EFCAB2-215ENST00000549220 BMP15O95972 392 aa6.5□□□□□ -1.37
EFCAB2-215ENST00000549220 SRFP11831 508 aa6.5□□□□□ -1.37
EFCAB2-215ENST00000549220 MYOGP15173 224 aa6.5□□□□□ -1.37
EFCAB2-215ENST00000549220 RPA1P27694 616 aa6.5□□□□□ -1.37
EFCAB2-215ENST00000549220 PRPHP41219 470 aa6.5□□□□□ -1.37
EFCAB2-215ENST00000549220 UBA7P41226 1012 aa6.5□□□□□ -1.37
EFCAB2-215ENST00000549220 RARRES1P49788 294 aa6.5□□□□□ -1.37
EFCAB2-215ENST00000549220 DEFB103AP81534 67 aa6.5□□□□□ -1.37
EFCAB2-215ENST00000549220 MGAT3Q09327 533 aa6.5□□□□□ -1.37
EFCAB2-215ENST00000549220 GPNMBQ14956 572 aa6.5□□□□□ -1.37
EFCAB2-215ENST00000549220 KARSQ15046 597 aaKnown RBP6.5□□□□□ -1.37
EFCAB2-215ENST00000549220 GAB4Q2WGN9 574 aa6.5□□□□□ -1.37
EFCAB2-215ENST00000549220 LONRF3Q496Y0 759 aa6.5□□□□□ -1.37
EFCAB2-215ENST00000549220 FBLN7Q53RD9 439 aa6.5□□□□□ -1.37
EFCAB2-215ENST00000549220 FBXO47Q5MNV8 452 aa6.5□□□□□ -1.37
EFCAB2-215ENST00000549220 CDKAL1Q5VV42 579 aa6.5□□□□□ -1.37
EFCAB2-215ENST00000549220 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.5□□□□□ -1.37
EFCAB2-215ENST00000549220 PRR23BQ6ZRT6 265 aa6.5□□□□□ -1.37
EFCAB2-215ENST00000549220 Q7L0L9 218 aa6.5□□□□□ -1.37
EFCAB2-215ENST00000549220 CDH24Q86UP0 819 aa6.5□□□□□ -1.37
EFCAB2-215ENST00000549220 NPAS4Q8IUM7 802 aa6.5□□□□□ -1.37
EFCAB2-215ENST00000549220 PDILTQ8N807 584 aa6.5□□□□□ -1.37
EFCAB2-215ENST00000549220 IGSF22Q8N9C0 903 aa6.5□□□□□ -1.37
EFCAB2-215ENST00000549220 RNF169Q8NCN4 708 aa6.5□□□□□ -1.37
EFCAB2-215ENST00000549220 CALML4Q96GE6 196 aa6.5□□□□□ -1.37
EFCAB2-215ENST00000549220 FAM84AQ96KN4 292 aa6.5□□□□□ -1.37
EFCAB2-215ENST00000549220 HSD17B14Q9BPX1 270 aa6.5□□□□□ -1.37
EFCAB2-215ENST00000549220 FDXACB1Q9BRP7 624 aaPredicted RBP6.5□□□□□ -1.37
EFCAB2-215ENST00000549220 POLR3CQ9BUI4 534 aaPredicted RBP6.5□□□□□ -1.37
EFCAB2-215ENST00000549220 CSRNP2Q9H175 543 aa6.5□□□□□ -1.37
EFCAB2-215ENST00000549220 POLR3FQ9H1D9 316 aaPredicted RBP6.5□□□□□ -1.37
EFCAB2-215ENST00000549220 DUSP15Q9H1R2 295 aaPredicted RBP6.5□□□□□ -1.37
EFCAB2-215ENST00000549220 BHMT2Q9H2M3 363 aa6.5□□□□□ -1.37
EFCAB2-215ENST00000549220 PRO3102Q9H379 93 aa6.5□□□□□ -1.37
EFCAB2-215ENST00000549220 AGO3Q9H9G7 860 aaKnown RBP6.5□□□□□ -1.37
EFCAB2-215ENST00000549220 ATP6V0A4Q9HBG4 840 aa6.5□□□□□ -1.37
EFCAB2-215ENST00000549220 TUFT1Q9NNX1 390 aa6.5□□□□□ -1.37
EFCAB2-215ENST00000549220 GPRC5CQ9NQ84 441 aa6.5□□□□□ -1.37
EFCAB2-215ENST00000549220 PADI3Q9ULW8 664 aa6.5□□□□□ -1.37
EFCAB2-215ENST00000549220 NOC2LQ9Y3T9 749 aaKnown RBP6.5□□□□□ -1.37
EFCAB2-215ENST00000549220 KDM3AQ9Y4C1 1321 aa6.5□□□□□ -1.37
EFCAB2-215ENST00000549220 PRRC2BQ5JSZ5 2229 aaKnown RBP6.49□□□□□ -1.37
EFCAB2-215ENST00000549220 NPHP3-ACAD11A0A0J9YXS1 232 aa6.49□□□□□ -1.37
EFCAB2-215ENST00000549220 DENND3A2RUS2 1198 aa6.49□□□□□ -1.37
EFCAB2-215ENST00000549220 FAM221AA4D161 298 aa6.49□□□□□ -1.37
EFCAB2-215ENST00000549220 LRRIQ4A6NIV6 560 aa6.49□□□□□ -1.37
EFCAB2-215ENST00000549220 SPTLC2O15270 562 aa6.49□□□□□ -1.37
EFCAB2-215ENST00000549220 CAND2O75155 1236 aa6.49□□□□□ -1.37
EFCAB2-215ENST00000549220 CSPG5O95196 566 aa6.49□□□□□ -1.37
EFCAB2-215ENST00000549220 PARNO95453 639 aaKnown RBP6.49□□□□□ -1.37
EFCAB2-215ENST00000549220 KRT18P05783 430 aaKnown RBP6.49□□□□□ -1.37
EFCAB2-215ENST00000549220 GLI1P08151 1106 aa6.49□□□□□ -1.37
EFCAB2-215ENST00000549220 PFKMP08237 780 aa6.49□□□□□ -1.37
EFCAB2-215ENST00000549220 ATP2A2P16615 1042 aaKnown RBP6.49□□□□□ -1.37
EFCAB2-215ENST00000549220 ME1P48163 572 aa6.49□□□□□ -1.37
EFCAB2-215ENST00000549220 GPC3P51654 580 aa6.49□□□□□ -1.37
EFCAB2-215ENST00000549220 WDR5P61964 334 aaKnown RBP6.49□□□□□ -1.37
EFCAB2-215ENST00000549220 ETF1P62495 437 aaKnown RBP6.49□□□□□ -1.37
EFCAB2-215ENST00000549220 RBL2Q08999 1139 aa6.49□□□□□ -1.37
EFCAB2-215ENST00000549220 GRB10Q13322 594 aa6.49□□□□□ -1.37
EFCAB2-215ENST00000549220 PDIA5Q14554 519 aa6.49□□□□□ -1.37
EFCAB2-215ENST00000549220 PTPAQ15257 358 aa6.49□□□□□ -1.37
EFCAB2-215ENST00000549220 TARBP2Q15633 366 aaKnown RBP6.49□□□□□ -1.37
EFCAB2-215ENST00000549220 CCDC85BQ15834 202 aaPredicted RBP6.49□□□□□ -1.37
EFCAB2-215ENST00000549220 KCNMB1Q16558 191 aa6.49□□□□□ -1.37
EFCAB2-215ENST00000549220 PLEKHG4Q58EX7 1191 aa6.49□□□□□ -1.37
EFCAB2-215ENST00000549220 ARL6IP4Q66PJ3 421 aaKnown RBP6.49□□□□□ -1.37
EFCAB2-215ENST00000549220 TSHZ1Q6ZSZ6 1077 aa6.49□□□□□ -1.37
EFCAB2-215ENST00000549220 USP49Q70CQ1 688 aa6.49□□□□□ -1.37
EFCAB2-215ENST00000549220 CATSPER4Q7RTX7 472 aa6.49□□□□□ -1.37
EFCAB2-215ENST00000549220 KCNK18Q7Z418 384 aa6.49□□□□□ -1.37
EFCAB2-215ENST00000549220 FAM228AQ86W67 206 aa6.49□□□□□ -1.37
EFCAB2-215ENST00000549220 MCATQ8IVS2 390 aaKnown RBP6.49□□□□□ -1.37
EFCAB2-215ENST00000549220 NME8Q8N427 588 aa6.49□□□□□ -1.37
EFCAB2-215ENST00000549220 RNF149Q8NC42 400 aa6.49□□□□□ -1.37
EFCAB2-215ENST00000549220 TCP11Q8WWU5 503 aa6.49□□□□□ -1.37
EFCAB2-215ENST00000549220 PRPF31Q8WWY3 499 aaKnown RBP6.49□□□□□ -1.37
EFCAB2-215ENST00000549220 PSPC1Q8WXF1 523 aaKnown RBP6.49□□□□□ -1.37
EFCAB2-215ENST00000549220 HERVK_113Q902F9 699 aa6.49□□□□□ -1.37
EFCAB2-215ENST00000549220 VWCEQ96DN2 955 aa6.49□□□□□ -1.37
EFCAB2-215ENST00000549220 EPSTI1Q96J88 318 aa6.49□□□□□ -1.37
EFCAB2-215ENST00000549220 CEP89Q96ST8 783 aa6.49□□□□□ -1.37
EFCAB2-215ENST00000549220 JPH2Q9BR39 696 aaPredicted RBP6.49□□□□□ -1.37
EFCAB2-215ENST00000549220 MMTAG2Q9BU76 263 aaKnown RBP6.49□□□□□ -1.37
EFCAB2-215ENST00000549220 GCOM2Q9BZD3 368 aaPredicted RBP6.49□□□□□ -1.37
EFCAB2-215ENST00000549220 NKX2-4Q9H2Z4 354 aa6.49□□□□□ -1.37
EFCAB2-215ENST00000549220 ZHX3Q9H4I2 956 aa6.49□□□□□ -1.37
EFCAB2-215ENST00000549220 CERS4Q9HA82 394 aa6.49□□□□□ -1.37
EFCAB2-215ENST00000549220 XPNPEP1Q9NQW7 623 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms