RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 VPS11Q9H270 941 aa24.38■■□□□ 1.49
NPAS3-206ENST00000548645 MMADHCQ9H3L0 296 aaPredicted RBP24.38■■□□□ 1.49
NPAS3-206ENST00000548645 ZHX2Q9Y6X8 837 aa24.38■■□□□ 1.49
NPAS3-206ENST00000548645 MAGEA13PA6NCF6 341 aa24.38■■□□□ 1.49
NPAS3-206ENST00000548645 TM9SF1O15321 606 aa24.38■■□□□ 1.49
NPAS3-206ENST00000548645 BPIFB4P59827 614 aa24.38■■□□□ 1.49
NPAS3-206ENST00000548645 AP1B1Q10567 949 aa24.38■■□□□ 1.49
NPAS3-206ENST00000548645 SV2AQ7L0J3 742 aa24.38■■□□□ 1.49
NPAS3-206ENST00000548645 MON1BQ7L1V2 547 aa24.38■■□□□ 1.49
NPAS3-206ENST00000548645 ELMO3Q96BJ8 720 aa24.38■■□□□ 1.49
NPAS3-206ENST00000548645 ADAM33Q9BZ11 813 aa24.38■■□□□ 1.49
NPAS3-206ENST00000548645 PPP1R12CQ9BZL4 782 aa24.38■■□□□ 1.49
NPAS3-206ENST00000548645 MANSC1Q9H8J5 431 aa24.38■■□□□ 1.49
NPAS3-206ENST00000548645 FETUBQ9UGM5 382 aa24.38■■□□□ 1.49
NPAS3-206ENST00000548645 SHOC2Q9UQ13 582 aa24.38■■□□□ 1.49
NPAS3-206ENST00000548645 SMCHD1A6NHR9 2005 aa24.37■■□□□ 1.49
NPAS3-206ENST00000548645 KCNA3P22001 575 aa24.37■■□□□ 1.49
NPAS3-206ENST00000548645 ARFIP2P53365 341 aa24.37■■□□□ 1.49
NPAS3-206ENST00000548645 ZBTB16Q05516 673 aa24.37■■□□□ 1.49
NPAS3-206ENST00000548645 DNAJC6O75061 913 aa24.37■■□□□ 1.49
NPAS3-206ENST00000548645 TBX10O75333 385 aa24.37■■□□□ 1.49
NPAS3-206ENST00000548645 CYP1A1P04798 512 aaPredicted RBP24.37■■□□□ 1.49
NPAS3-206ENST00000548645 RPS6KA3P51812 740 aa24.37■■□□□ 1.49
NPAS3-206ENST00000548645 NCKAP1LP55160 1127 aa24.37■■□□□ 1.49
NPAS3-206ENST00000548645 VPS72Q15906 364 aa24.37■■□□□ 1.49
NPAS3-206ENST00000548645 SCYL3Q8IZE3 742 aa24.37■■□□□ 1.49
NPAS3-206ENST00000548645 ZNF212Q9UDV6 495 aa24.37■■□□□ 1.49
NPAS3-206ENST00000548645 MTO1Q9Y2Z2 717 aaKnown RBP24.37■■□□□ 1.49
NPAS3-206ENST00000548645 SIPA1L1O43166 1804 aa24.37■■□□□ 1.49
NPAS3-206ENST00000548645 ADAMTSL1Q8N6G6 1762 aa24.36■■□□□ 1.49
NPAS3-206ENST00000548645 MAP3K7O43318 606 aa24.36■■□□□ 1.49
NPAS3-206ENST00000548645 TJP3O95049 919 aa24.36■■□□□ 1.49
NPAS3-206ENST00000548645 PHBP35232 272 aa24.36■■□□□ 1.49
NPAS3-206ENST00000548645 PIK3CAP42336 1068 aa24.36■■□□□ 1.49
NPAS3-206ENST00000548645 CACNA2D1P54289 1103 aa24.36■■□□□ 1.49
NPAS3-206ENST00000548645 AOC3Q16853 763 aa24.36■■□□□ 1.49
NPAS3-206ENST00000548645 RCOR2Q8IZ40 523 aa24.36■■□□□ 1.49
NPAS3-206ENST00000548645 ALKBH8Q96BT7 664 aaKnown RBP24.36■■□□□ 1.49
NPAS3-206ENST00000548645 RBM41Q96IZ5 413 aaKnown RBP24.36■■□□□ 1.49
NPAS3-206ENST00000548645 FGD4Q96M96 766 aa24.36■■□□□ 1.49
NPAS3-206ENST00000548645 C1orf112Q9NSG2 853 aa24.36■■□□□ 1.49
NPAS3-206ENST00000548645 DRG1Q9Y295 367 aaKnown RBP24.36■■□□□ 1.49
NPAS3-206ENST00000548645 ZC3H11AO75152 810 aaKnown RBP eCLIP24.36■■□□□ 1.49
NPAS3-206ENST00000548645 RNASEH2BQ5TBB1 312 aaKnown RBP24.36■■□□□ 1.49
NPAS3-206ENST00000548645 KAZNQ674X7 775 aa24.36■■□□□ 1.49
NPAS3-206ENST00000548645 CCDC62Q6P9F0 684 aa24.36■■□□□ 1.49
NPAS3-206ENST00000548645 ZNF276Q8N554 614 aa24.36■■□□□ 1.49
NPAS3-206ENST00000548645 TCP10LQ8TDR4 215 aa24.36■■□□□ 1.49
NPAS3-206ENST00000548645 ZDHHC15Q96MV8 337 aa24.36■■□□□ 1.49
NPAS3-206ENST00000548645 TIPINQ9BVW5 301 aa24.36■■□□□ 1.49
NPAS3-206ENST00000548645 ETS1P14921 441 aa24.35■■□□□ 1.49
NPAS3-206ENST00000548645 ZFYVE27Q5T4F4 411 aa24.35■■□□□ 1.49
NPAS3-206ENST00000548645 SH3BP5LQ7L8J4 393 aa24.35■■□□□ 1.49
NPAS3-206ENST00000548645 SP8Q8IXZ3 490 aa24.35■■□□□ 1.49
NPAS3-206ENST00000548645 MFSD14AQ96MC6 490 aa24.35■■□□□ 1.49
NPAS3-206ENST00000548645 MXRA8Q9BRK3 442 aa24.35■■□□□ 1.49
NPAS3-206ENST00000548645 C11orf70Q9BRQ4 267 aa24.35■■□□□ 1.49
NPAS3-206ENST00000548645 TSSK1BQ9BXA7 367 aa24.35■■□□□ 1.49
NPAS3-206ENST00000548645 METTL5Q9NRN9 209 aaKnown RBP24.35■■□□□ 1.49
NPAS3-206ENST00000548645 SERPINB2P05120 415 aa24.35■■□□□ 1.49
NPAS3-206ENST00000548645 KRT10P13645 584 aa24.35■■□□□ 1.49
NPAS3-206ENST00000548645 POLE2P56282 527 aa24.35■■□□□ 1.49
NPAS3-206ENST00000548645 NOP14P78316 857 aaKnown RBP24.35■■□□□ 1.49
NPAS3-206ENST00000548645 KRT72Q14CN4 511 aa24.35■■□□□ 1.49
NPAS3-206ENST00000548645 ARHGAP24Q8N264 748 aa24.35■■□□□ 1.49
NPAS3-206ENST00000548645 PI4K2AQ9BTU6 479 aa24.35■■□□□ 1.49
NPAS3-206ENST00000548645 FAM198AQ9UFP1 575 aa24.35■■□□□ 1.49
NPAS3-206ENST00000548645 MRPL11Q9Y3B7 192 aaKnown RBP24.35■■□□□ 1.49
NPAS3-206ENST00000548645 GH2P01242 217 aa24.34■■□□□ 1.49
NPAS3-206ENST00000548645 ESRRAP11474 423 aaPredicted RBP24.34■■□□□ 1.49
NPAS3-206ENST00000548645 CDK16Q00536 496 aa24.34■■□□□ 1.49
NPAS3-206ENST00000548645 MAMLD1Q13495 774 aa24.34■■□□□ 1.49
NPAS3-206ENST00000548645 TBC1D10BQ4KMP7 808 aaPredicted RBP24.34■■□□□ 1.49
NPAS3-206ENST00000548645 PDP2Q9P2J9 529 aa24.34■■□□□ 1.49
NPAS3-206ENST00000548645 RABGEF1Q9UJ41 708 aa24.34■■□□□ 1.49
NPAS3-206ENST00000548645 TBX20Q9UMR3 447 aa24.34■■□□□ 1.49
NPAS3-206ENST00000548645 SCINQ9Y6U3 715 aa24.34■■□□□ 1.49
NPAS3-206ENST00000548645 NFASCO94856 1347 aa24.34■■□□□ 1.49
NPAS3-206ENST00000548645 A8MXQ7 604 aa24.34■■□□□ 1.49
NPAS3-206ENST00000548645 ATF7P17544 494 aaPredicted RBP24.34■■□□□ 1.49
NPAS3-206ENST00000548645 DOK7Q18PE1 504 aa24.34■■□□□ 1.49
NPAS3-206ENST00000548645 DTX3LQ8TDB6 740 aa24.34■■□□□ 1.49
NPAS3-206ENST00000548645 GATA6Q92908 595 aa24.34■■□□□ 1.49
NPAS3-206ENST00000548645 SKA1Q96BD8 255 aa24.34■■□□□ 1.49
NPAS3-206ENST00000548645 IDI2Q9BXS1 227 aa24.34■■□□□ 1.49
NPAS3-206ENST00000548645 PKD2L1Q9P0L9 805 aa24.34■■□□□ 1.49
NPAS3-206ENST00000548645 SERPINB3P29508 390 aa24.34■■□□□ 1.49
NPAS3-206ENST00000548645 GPX6P59796 221 aa24.34■■□□□ 1.49
NPAS3-206ENST00000548645 PDCD2Q16342 344 aaPredicted RBP24.34■■□□□ 1.49
NPAS3-206ENST00000548645 ADGRD1Q6QNK2 874 aa24.34■■□□□ 1.49
NPAS3-206ENST00000548645 ANKMY2Q8IV38 441 aa24.34■■□□□ 1.49
NPAS3-206ENST00000548645 VCPIP1Q96JH7 1222 aa24.34■■□□□ 1.49
NPAS3-206ENST00000548645 ZNF184Q99676 751 aaPredicted RBP24.34■■□□□ 1.49
NPAS3-206ENST00000548645 FAM192AQ9GZU8 254 aa24.34■■□□□ 1.49
NPAS3-206ENST00000548645 TAS2R1Q9NYW7 299 aa24.34■■□□□ 1.49
NPAS3-206ENST00000548645 PI4K2BG5E9Z4 385 aa24.33■■□□□ 1.49
NPAS3-206ENST00000548645 PPEF1O14829 653 aaPredicted RBP24.33■■□□□ 1.49
NPAS3-206ENST00000548645 TLR3O15455 904 aaKnown RBP24.33■■□□□ 1.49
NPAS3-206ENST00000548645 QARSP47897 775 aaKnown RBP24.33■■□□□ 1.49
NPAS3-206ENST00000548645 HIF1AQ16665 826 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms