RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 NSUN7Q8NE18 718 aaKnown RBP5.53□□□□□ -1.52
CCDC38-204ENST00000546816 NSUN6Q8TEA1 469 aaKnown RBP5.53□□□□□ -1.52
CCDC38-204ENST00000546816 ZBTB9Q96C00 473 aa5.53□□□□□ -1.52
CCDC38-204ENST00000546816 MTMR8Q96EF0 704 aa5.53□□□□□ -1.52
CCDC38-204ENST00000546816 KLC4Q9NSK0 619 aa5.53□□□□□ -1.52
CCDC38-204ENST00000546816 MRFAP1Q9Y605 127 aa5.53□□□□□ -1.52
CCDC38-204ENST00000546816 ADGRA2Q96PE1 1338 aa5.52□□□□□ -1.53
CCDC38-204ENST00000546816 CCDC195A0A1B0GUA6 201 aa5.52□□□□□ -1.53
CCDC38-204ENST00000546816 ZRANB2O95218 330 aaKnown RBP eCLIP5.52□□□□□ -1.53
CCDC38-204ENST00000546816 GRM1Q13255 1194 aa5.52□□□□□ -1.53
CCDC38-204ENST00000546816 PPP4R3AQ6IN85 833 aa5.52□□□□□ -1.53
CCDC38-204ENST00000546816 CFAP52Q8N1V2 620 aa5.52□□□□□ -1.53
CCDC38-204ENST00000546816 SNX19Q92543 992 aa5.52□□□□□ -1.53
CCDC38-204ENST00000546816 VRK1Q99986 396 aaPredicted RBP5.52□□□□□ -1.53
CCDC38-204ENST00000546816 PACSIN1Q9BY11 444 aa5.52□□□□□ -1.53
CCDC38-204ENST00000546816 SLC13A1Q9BZW2 595 aa5.52□□□□□ -1.53
CCDC38-204ENST00000546816 SERGEFQ9UGK8 458 aa5.52□□□□□ -1.53
CCDC38-204ENST00000546816 BTBD3Q9Y2F9 522 aa5.52□□□□□ -1.53
CCDC38-204ENST00000546816 NT5C1B-RDH14C9J2C7 533 aa5.51□□□□□ -1.53
CCDC38-204ENST00000546816 E7ENX8 843 aa5.51□□□□□ -1.53
CCDC38-204ENST00000546816 E9PLN8 166 aa5.51□□□□□ -1.53
CCDC38-204ENST00000546816 F2RL2O00254 374 aa5.51□□□□□ -1.53
CCDC38-204ENST00000546816 PTGER1P34995 402 aa5.51□□□□□ -1.53
CCDC38-204ENST00000546816 ADKP55263 362 aaKnown RBP5.51□□□□□ -1.53
CCDC38-204ENST00000546816 TAP2Q03519 686 aa5.51□□□□□ -1.53
CCDC38-204ENST00000546816 ITIH3Q06033 890 aa5.51□□□□□ -1.53
CCDC38-204ENST00000546816 SNAPC2Q13487 334 aa5.51□□□□□ -1.53
CCDC38-204ENST00000546816 PTPN21Q16825 1174 aa5.51□□□□□ -1.53
CCDC38-204ENST00000546816 FAM153CQ494X1 144 aa5.51□□□□□ -1.53
CCDC38-204ENST00000546816 KHDC1Q4VXA5 237 aaKnown RBP5.51□□□□□ -1.53
CCDC38-204ENST00000546816 EFCAB2Q5VUJ9 269 aa5.51□□□□□ -1.53
CCDC38-204ENST00000546816 GADL1Q6ZQY3 521 aa5.51□□□□□ -1.53
CCDC38-204ENST00000546816 PNMA8AQ86V59 439 aaPredicted RBP5.51□□□□□ -1.53
CCDC38-204ENST00000546816 SLC17A8Q8NDX2 589 aa5.51□□□□□ -1.53
CCDC38-204ENST00000546816 FCRL4Q96PJ5 515 aa5.51□□□□□ -1.53
CCDC38-204ENST00000546816 VKORC1Q9BQB6 163 aa5.51□□□□□ -1.53
CCDC38-204ENST00000546816 IMPG2Q9BZV3 1241 aa5.51□□□□□ -1.53
CCDC38-204ENST00000546816 SEMA4CQ9C0C4 833 aa5.51□□□□□ -1.53
CCDC38-204ENST00000546816 PADI4Q9UM07 663 aa5.51□□□□□ -1.53
CCDC38-204ENST00000546816 ALG1L2C9J202 215 aa5.5□□□□□ -1.53
CCDC38-204ENST00000546816 URI1O94763 535 aaPredicted RBP5.5□□□□□ -1.53
CCDC38-204ENST00000546816 MALP21145 153 aa5.5□□□□□ -1.53
CCDC38-204ENST00000546816 POU6F2P78424 691 aaPredicted RBP5.5□□□□□ -1.53
CCDC38-204ENST00000546816 KLF9Q13886 244 aaPredicted RBP5.5□□□□□ -1.53
CCDC38-204ENST00000546816 UAP1L1Q3KQV9 507 aa5.5□□□□□ -1.53
CCDC38-204ENST00000546816 PREPLQ4J6C6 727 aaPredicted RBP5.5□□□□□ -1.53
CCDC38-204ENST00000546816 SUMO4Q6EEV6 95 aa5.5□□□□□ -1.53
CCDC38-204ENST00000546816 TTC7BQ86TV6 843 aa5.5□□□□□ -1.53
CCDC38-204ENST00000546816 B3GALNT2Q8NCR0 500 aa5.5□□□□□ -1.53
CCDC38-204ENST00000546816 RFKQ969G6 155 aa5.5□□□□□ -1.53
CCDC38-204ENST00000546816 PBKQ96KB5 322 aa5.5□□□□□ -1.53
CCDC38-204ENST00000546816 ZNF48Q96MX3 618 aaPredicted RBP5.5□□□□□ -1.53
CCDC38-204ENST00000546816 ASPSCR1Q9BZE9 553 aa5.5□□□□□ -1.53
CCDC38-204ENST00000546816 CFAP20Q9Y6A4 193 aaKnown RBP5.5□□□□□ -1.53
CCDC38-204ENST00000546816 PRSS29PA6NIE9 313 aa5.49□□□□□ -1.53
CCDC38-204ENST00000546816 TOR1BO14657 336 aa5.49□□□□□ -1.53
CCDC38-204ENST00000546816 IGKV2-30P06310 120 aa5.49□□□□□ -1.53
CCDC38-204ENST00000546816 DRD4P21917 467 aa5.49□□□□□ -1.53
CCDC38-204ENST00000546816 LPOP22079 712 aaPredicted RBP5.49□□□□□ -1.53
CCDC38-204ENST00000546816 KELP23276 732 aa5.49□□□□□ -1.53
CCDC38-204ENST00000546816 RPL36ALQ969Q0 106 aaKnown RBP5.49□□□□□ -1.53
CCDC38-204ENST00000546816 LRRC14BA6NHZ5 514 aa5.48□□□□□ -1.53
CCDC38-204ENST00000546816 TARM1B6A8C7 271 aa5.48□□□□□ -1.53
CCDC38-204ENST00000546816 TTLL1O95922 423 aa5.48□□□□□ -1.53
CCDC38-204ENST00000546816 BMP15O95972 392 aa5.48□□□□□ -1.53
CCDC38-204ENST00000546816 ANXA1P04083 346 aa5.48□□□□□ -1.53
CCDC38-204ENST00000546816 RPLP2P05387 115 aaKnown RBP5.48□□□□□ -1.53
CCDC38-204ENST00000546816 HOXB6P17509 224 aaKnown RBP5.48□□□□□ -1.53
CCDC38-204ENST00000546816 NPTX2P47972 431 aa5.48□□□□□ -1.53
CCDC38-204ENST00000546816 FXR1P51114 621 aaKnown RBP eCLIP5.48□□□□□ -1.53
CCDC38-204ENST00000546816 TUBA4AP68366 448 aa5.48□□□□□ -1.53
CCDC38-204ENST00000546816 PIGFQ07326 219 aa5.48□□□□□ -1.53
CCDC38-204ENST00000546816 ETFDHQ16134 617 aa5.48□□□□□ -1.53
CCDC38-204ENST00000546816 TMEM119Q4V9L6 283 aa5.48□□□□□ -1.53
CCDC38-204ENST00000546816 SLC44A4Q53GD3 710 aa5.48□□□□□ -1.53
CCDC38-204ENST00000546816 CCDC93Q567U6 631 aa5.48□□□□□ -1.53
CCDC38-204ENST00000546816 ZNF66Q6ZN08 573 aa5.48□□□□□ -1.53
CCDC38-204ENST00000546816 NEK8Q86SG6 692 aa5.48□□□□□ -1.53
CCDC38-204ENST00000546816 PDSS2Q86YH6 399 aa5.48□□□□□ -1.53
CCDC38-204ENST00000546816 CAMKK1Q8N5S9 505 aa5.48□□□□□ -1.53
CCDC38-204ENST00000546816 POC1BQ8TC44 478 aa5.48□□□□□ -1.53
CCDC38-204ENST00000546816 SIDT1Q9NXL6 827 aaKnown RBP5.48□□□□□ -1.53
CCDC38-204ENST00000546816 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.48□□□□□ -1.53
CCDC38-204ENST00000546816 MOSPD3O75425 235 aa5.47□□□□□ -1.53
CCDC38-204ENST00000546816 HNRNPCP07910 306 aaKnown RBP eCLIP5.47□□□□□ -1.53
CCDC38-204ENST00000546816 RHOP08100 348 aa5.47□□□□□ -1.53
CCDC38-204ENST00000546816 CCT8P50990 548 aa5.47□□□□□ -1.53
CCDC38-204ENST00000546816 KRTAP10-7P60409 375 aaPredicted RBP5.47□□□□□ -1.53
CCDC38-204ENST00000546816 MORN5Q5VZ52 161 aa5.47□□□□□ -1.53
CCDC38-204ENST00000546816 TAPT1Q6NXT6 567 aa5.47□□□□□ -1.53
CCDC38-204ENST00000546816 SLC4A10Q6U841 1118 aa5.47□□□□□ -1.53
CCDC38-204ENST00000546816 FBXO41Q8TF61 875 aa5.47□□□□□ -1.53
CCDC38-204ENST00000546816 TRIB1Q96RU8 372 aa5.47□□□□□ -1.53
CCDC38-204ENST00000546816 ALG8Q9BVK2 526 aa5.47□□□□□ -1.53
CCDC38-204ENST00000546816 MRPS18AQ9NVS2 196 aaKnown RBP5.47□□□□□ -1.53
CCDC38-204ENST00000546816 SPATA31A3Q5VYP0 1347 aa5.47□□□□□ -1.53
CCDC38-204ENST00000546816 TRIM38O00635 465 aa5.46□□□□□ -1.54
CCDC38-204ENST00000546816 NR2F6P10588 404 aa5.46□□□□□ -1.54
CCDC38-204ENST00000546816 EPHB2P29323 1055 aa5.46□□□□□ -1.54
CCDC38-204ENST00000546816 CYP2C19P33261 490 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms