RNA–Protein interactions for RNA: ENST00000546590.2

TMTC2-202, Transcript of transmembrane and tetratricopeptide repeat containing 2, humanhuman

TSL 1 (best)

Gene TMTC2, Length 4,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMTC2-202ENST00000546590 P3H4Q92791 437 aa8.9□□□□□ -0.98
TMTC2-202ENST00000546590 CCDC124Q96CT7 223 aaKnown RBP8.9□□□□□ -0.98
TMTC2-202ENST00000546590 FDXACB1Q9BRP7 624 aaPredicted RBP8.9□□□□□ -0.98
TMTC2-202ENST00000546590 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.9□□□□□ -0.98
TMTC2-202ENST00000546590 CCT8L1PA6NM43 557 aa8.9□□□□□ -0.99
TMTC2-202ENST00000546590 CTSHP09668 335 aa8.9□□□□□ -0.99
TMTC2-202ENST00000546590 SUPT20HL2P0C7V6 817 aa8.9□□□□□ -0.99
TMTC2-202ENST00000546590 CTCFP49711 727 aaPredicted RBP8.9□□□□□ -0.99
TMTC2-202ENST00000546590 WNT7BP56706 349 aa8.9□□□□□ -0.99
TMTC2-202ENST00000546590 TFDP1Q14186 410 aa8.9□□□□□ -0.99
TMTC2-202ENST00000546590 CFAP157Q5JU67 520 aa8.9□□□□□ -0.99
TMTC2-202ENST00000546590 LVRNQ6Q4G3 990 aa8.9□□□□□ -0.99
TMTC2-202ENST00000546590 LRIG3Q6UXM1 1119 aa8.9□□□□□ -0.99
TMTC2-202ENST00000546590 VSIG10LQ86VR7 867 aa8.9□□□□□ -0.99
TMTC2-202ENST00000546590 FAM71AQ8IYT1 594 aa8.9□□□□□ -0.99
TMTC2-202ENST00000546590 C12orf29Q8N999 325 aa8.9□□□□□ -0.99
TMTC2-202ENST00000546590 DNAAF3Q8N9W5 541 aa8.9□□□□□ -0.99
TMTC2-202ENST00000546590 SEPT1Q8WYJ6 367 aa8.9□□□□□ -0.99
TMTC2-202ENST00000546590 STMN2Q93045 179 aa8.9□□□□□ -0.99
TMTC2-202ENST00000546590 SMYD3Q9H7B4 428 aa8.9□□□□□ -0.99
TMTC2-202ENST00000546590 ACSS2Q9NR19 701 aa8.9□□□□□ -0.99
TMTC2-202ENST00000546590 PDGFCQ9NRA1 345 aa8.9□□□□□ -0.99
TMTC2-202ENST00000546590 C2orf71A6NGG8 1288 aa8.89□□□□□ -0.99
TMTC2-202ENST00000546590 A6NJR5 290 aa8.89□□□□□ -0.99
TMTC2-202ENST00000546590 A8MUI8 341 aa8.89□□□□□ -0.99
TMTC2-202ENST00000546590 CPP00450 1065 aa8.89□□□□□ -0.99
TMTC2-202ENST00000546590 RARBP10826 455 aa8.89□□□□□ -0.99
TMTC2-202ENST00000546590 PTPRAP18433 802 aa8.89□□□□□ -0.99
TMTC2-202ENST00000546590 RFC1P35251 1148 aaPredicted RBP8.89□□□□□ -0.99
TMTC2-202ENST00000546590 RABGGTBP53611 331 aa8.89□□□□□ -0.99
TMTC2-202ENST00000546590 KCNJ2P63252 427 aa8.89□□□□□ -0.99
TMTC2-202ENST00000546590 KDSRQ06136 332 aa8.89□□□□□ -0.99
TMTC2-202ENST00000546590 TAF5Q15542 800 aa8.89□□□□□ -0.99
TMTC2-202ENST00000546590 ATF7IP2Q5U623 682 aa8.89□□□□□ -0.99
TMTC2-202ENST00000546590 EEF1DP3Q658K8 133 aa8.89□□□□□ -0.99
TMTC2-202ENST00000546590 DUPD1Q68J44 220 aa8.89□□□□□ -0.99
TMTC2-202ENST00000546590 CYP4F11Q9HBI6 524 aa8.89□□□□□ -0.99
TMTC2-202ENST00000546590 KCND2Q9NZV8 630 aa8.89□□□□□ -0.99
TMTC2-202ENST00000546590 IP6K2Q9UHH9 426 aa8.89□□□□□ -0.99
TMTC2-202ENST00000546590 XPO7Q9UIA9 1087 aaKnown RBP8.89□□□□□ -0.99
TMTC2-202ENST00000546590 PIK3CDO00329 1044 aa8.89□□□□□ -0.99
TMTC2-202ENST00000546590 TRAPPC3O43617 180 aa8.89□□□□□ -0.99
TMTC2-202ENST00000546590 TROVE2P10155 538 aaKnown RBP eCLIP8.89□□□□□ -0.99
TMTC2-202ENST00000546590 MARSP56192 900 aaKnown RBP8.89□□□□□ -0.99
TMTC2-202ENST00000546590 CRADDP78560 199 aa8.89□□□□□ -0.99
TMTC2-202ENST00000546590 TMPRSS15P98073 1019 aa8.89□□□□□ -0.99
TMTC2-202ENST00000546590 SP2Q02086 613 aa8.89□□□□□ -0.99
TMTC2-202ENST00000546590 AUHQ13825 339 aaKnown RBP8.89□□□□□ -0.99
TMTC2-202ENST00000546590 MROH9Q5TGP6 573 aa8.89□□□□□ -0.99
TMTC2-202ENST00000546590 CES3Q6UWW8 571 aa8.89□□□□□ -0.99
TMTC2-202ENST00000546590 BTNL9Q6UXG8 535 aa8.89□□□□□ -0.99
TMTC2-202ENST00000546590 SHC3Q92529 594 aa8.89□□□□□ -0.99
TMTC2-202ENST00000546590 TRIM11Q96F44 468 aa8.89□□□□□ -0.99
TMTC2-202ENST00000546590 SH3GL2Q99962 352 aa8.89□□□□□ -0.99
TMTC2-202ENST00000546590 APOL2Q9BQE5 337 aa8.89□□□□□ -0.99
TMTC2-202ENST00000546590 ANKEF1Q9NU02 776 aa8.89□□□□□ -0.99
TMTC2-202ENST00000546590 NINJ2Q9NZG7 142 aa8.89□□□□□ -0.99
TMTC2-202ENST00000546590 PPARGC1AQ9UBK2 798 aaKnown RBP8.89□□□□□ -0.99
TMTC2-202ENST00000546590 UBIAD1Q9Y5Z9 338 aa8.89□□□□□ -0.99
TMTC2-202ENST00000546590 H0YCG3 227 aa8.89□□□□□ -0.99
TMTC2-202ENST00000546590 DNM1LO00429 736 aa8.89□□□□□ -0.99
TMTC2-202ENST00000546590 AGTP01019 485 aa8.89□□□□□ -0.99
TMTC2-202ENST00000546590 CA8P35219 290 aa8.89□□□□□ -0.99
TMTC2-202ENST00000546590 BCAR1P56945 870 aa8.89□□□□□ -0.99
TMTC2-202ENST00000546590 GTF2BQ00403 316 aa8.89□□□□□ -0.99
TMTC2-202ENST00000546590 GAD2Q05329 585 aa8.89□□□□□ -0.99
TMTC2-202ENST00000546590 NEDD9Q14511 834 aa8.89□□□□□ -0.99
TMTC2-202ENST00000546590 NXNQ6DKJ4 435 aa8.89□□□□□ -0.99
TMTC2-202ENST00000546590 CCDC62Q6P9F0 684 aa8.89□□□□□ -0.99
TMTC2-202ENST00000546590 EXOC3L1Q86VI1 746 aa8.89□□□□□ -0.99
TMTC2-202ENST00000546590 MAP4K3Q8IVH8 894 aa8.89□□□□□ -0.99
TMTC2-202ENST00000546590 HELQQ8TDG4 1101 aa8.89□□□□□ -0.99
TMTC2-202ENST00000546590 LRRC37BQ96QE4 947 aa8.89□□□□□ -0.99
TMTC2-202ENST00000546590 LPIN3Q9BQK8 851 aa8.89□□□□□ -0.99
TMTC2-202ENST00000546590 DCLK3Q9C098 648 aa8.89□□□□□ -0.99
TMTC2-202ENST00000546590 XPNPEP1Q9NQW7 623 aa8.89□□□□□ -0.99
TMTC2-202ENST00000546590 USP15Q9Y4E8 981 aaPredicted RBP8.89□□□□□ -0.99
TMTC2-202ENST00000546590 CHD4Q14839 1912 aa8.89□□□□□ -0.99
TMTC2-202ENST00000546590 CCDC160A6NGH7 325 aa8.88□□□□□ -0.99
TMTC2-202ENST00000546590 A8MXQ7 604 aa8.88□□□□□ -0.99
TMTC2-202ENST00000546590 I3L4J1 428 aa8.88□□□□□ -0.99
TMTC2-202ENST00000546590 CBX6O95503 412 aa8.88□□□□□ -0.99
TMTC2-202ENST00000546590 RARGP13631 454 aa8.88□□□□□ -0.99
TMTC2-202ENST00000546590 UBA1P22314 1058 aaKnown RBP8.88□□□□□ -0.99
TMTC2-202ENST00000546590 HMGB2P26583 209 aaKnown RBP8.88□□□□□ -0.99
TMTC2-202ENST00000546590 PHBP35232 272 aa8.88□□□□□ -0.99
TMTC2-202ENST00000546590 SPARCL1Q14515 664 aa8.88□□□□□ -0.99
TMTC2-202ENST00000546590 SPRED3Q2MJR0 410 aa8.88□□□□□ -0.99
TMTC2-202ENST00000546590 COBLL1Q53SF7 1204 aa8.88□□□□□ -0.99
TMTC2-202ENST00000546590 TMEM63BQ5T3F8 832 aa8.88□□□□□ -0.99
TMTC2-202ENST00000546590 DENND1BQ6P3S1 775 aa8.88□□□□□ -0.99
TMTC2-202ENST00000546590 ZNF662Q6ZS27 426 aa8.88□□□□□ -0.99
TMTC2-202ENST00000546590 SCUBE3Q8IX30 993 aa8.88□□□□□ -0.99
TMTC2-202ENST00000546590 TMEM192Q8IY95 271 aa8.88□□□□□ -0.99
TMTC2-202ENST00000546590 CYP4X1Q8N118 509 aa8.88□□□□□ -0.99
TMTC2-202ENST00000546590 ADAM32Q8TC27 787 aa8.88□□□□□ -0.99
TMTC2-202ENST00000546590 ZNF516Q92618 1163 aa8.88□□□□□ -0.99
TMTC2-202ENST00000546590 RBM41Q96IZ5 413 aaKnown RBP8.88□□□□□ -0.99
TMTC2-202ENST00000546590 FAM111AQ96PZ2 611 aa8.88□□□□□ -0.99
TMTC2-202ENST00000546590 FAM129AQ9BZQ8 928 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms