RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 DNAJB7Q7Z6W7 309 aaPredicted RBP13.9□□□□□ -0.18
SCAF11-208ENST00000546534 KDF1Q8NAX2 398 aaPredicted RBP13.9□□□□□ -0.18
SCAF11-208ENST00000546534 ATAD1Q8NBU5 361 aa13.9□□□□□ -0.18
SCAF11-208ENST00000546534 BPIFB1Q8TDL5 484 aa13.9□□□□□ -0.18
SCAF11-208ENST00000546534 ZBTB45Q96K62 511 aaPredicted RBP13.9□□□□□ -0.18
SCAF11-208ENST00000546534 TUBGCP4Q9UGJ1 667 aa13.9□□□□□ -0.18
SCAF11-208ENST00000546534 WASF3Q9UPY6 502 aa13.9□□□□□ -0.18
SCAF11-208ENST00000546534 FRYQ5TBA9 3013 aa13.9□□□□□ -0.18
SCAF11-208ENST00000546534 SOAT2O75908 522 aa13.89□□□□□ -0.19
SCAF11-208ENST00000546534 SPINK2P20155 84 aa13.89□□□□□ -0.19
SCAF11-208ENST00000546534 GABRR2P28476 465 aa13.89□□□□□ -0.19
SCAF11-208ENST00000546534 FOXC1Q12948 553 aa13.89□□□□□ -0.19
SCAF11-208ENST00000546534 GPR17Q13304 367 aa13.89□□□□□ -0.19
SCAF11-208ENST00000546534 SLC10A6Q3KNW5 377 aa13.89□□□□□ -0.19
SCAF11-208ENST00000546534 ARHGAP15Q53QZ3 475 aa13.89□□□□□ -0.19
SCAF11-208ENST00000546534 TMEM196Q5HYL7 178 aa13.89□□□□□ -0.19
SCAF11-208ENST00000546534 CENPPQ6IPU0 288 aa13.89□□□□□ -0.19
SCAF11-208ENST00000546534 FSTL4Q6MZW2 842 aa13.89□□□□□ -0.19
SCAF11-208ENST00000546534 MPZL3Q6UWV2 235 aa13.89□□□□□ -0.19
SCAF11-208ENST00000546534 DAW1Q8N136 415 aa13.89□□□□□ -0.19
SCAF11-208ENST00000546534 TTC9BQ8N6N2 239 aa13.89□□□□□ -0.19
SCAF11-208ENST00000546534 PSMG2Q969U7 264 aa13.89□□□□□ -0.19
SCAF11-208ENST00000546534 EDEM2Q9BV94 578 aa13.89□□□□□ -0.19
SCAF11-208ENST00000546534 DUSP15Q9H1R2 295 aaPredicted RBP13.89□□□□□ -0.19
SCAF11-208ENST00000546534 TMEM134Q9H6X4 195 aa13.89□□□□□ -0.19
SCAF11-208ENST00000546534 ARHGAP28Q9P2N2 729 aa13.89□□□□□ -0.19
SCAF11-208ENST00000546534 ASB3Q9Y575 518 aa13.89□□□□□ -0.19
SCAF11-208ENST00000546534 ZFYVE26Q68DK2 2539 aa13.89□□□□□ -0.19
SCAF11-208ENST00000546534 MTMR11A4FU01 709 aa13.88□□□□□ -0.19
SCAF11-208ENST00000546534 OR6C75A6NL08 312 aa13.88□□□□□ -0.19
SCAF11-208ENST00000546534 C4orf47A7E2U8 309 aa13.88□□□□□ -0.19
SCAF11-208ENST00000546534 ATG13O75143 517 aa13.88□□□□□ -0.19
SCAF11-208ENST00000546534 TOP3BO95985 862 aaKnown RBP13.88□□□□□ -0.19
SCAF11-208ENST00000546534 MUTP22033 750 aa13.88□□□□□ -0.19
SCAF11-208ENST00000546534 WEE1P30291 646 aa13.88□□□□□ -0.19
SCAF11-208ENST00000546534 CCT6AP40227 531 aaKnown RBP13.88□□□□□ -0.19
SCAF11-208ENST00000546534 MCM2P49736 904 aa13.88□□□□□ -0.19
SCAF11-208ENST00000546534 CYP4F8P98187 520 aa13.88□□□□□ -0.19
SCAF11-208ENST00000546534 ZNF252P-AS1Q0IIN9 211 aa13.88□□□□□ -0.19
SCAF11-208ENST00000546534 GRSF1Q12849 480 aaKnown RBP eCLIP13.88□□□□□ -0.19
SCAF11-208ENST00000546534 CAMKK1Q8N5S9 505 aa13.88□□□□□ -0.19
SCAF11-208ENST00000546534 NECAB1Q8N987 351 aa13.88□□□□□ -0.19
SCAF11-208ENST00000546534 CHFRQ96EP1 664 aa13.88□□□□□ -0.19
SCAF11-208ENST00000546534 OXCT2Q9BYC2 517 aaPredicted RBP13.88□□□□□ -0.19
SCAF11-208ENST00000546534 SMG9Q9H0W8 520 aaKnown RBP13.88□□□□□ -0.19
SCAF11-208ENST00000546534 TASP1Q9H6P5 420 aa13.88□□□□□ -0.19
SCAF11-208ENST00000546534 KMT5AQ9NQR1 393 aa13.88□□□□□ -0.19
SCAF11-208ENST00000546534 GKN1Q9NS71 199 aa13.88□□□□□ -0.19
SCAF11-208ENST00000546534 THG1LQ9NWX6 298 aaKnown RBP13.88□□□□□ -0.19
SCAF11-208ENST00000546534 SPAG17Q6Q759 2223 aa13.87□□□□□ -0.19
SCAF11-208ENST00000546534 IGF2RP11717 2491 aa13.87□□□□□ -0.19
SCAF11-208ENST00000546534 OTOL1A6NHN0 477 aaPredicted RBP13.87□□□□□ -0.19
SCAF11-208ENST00000546534 TRDMT1O14717 391 aaKnown RBP13.87□□□□□ -0.19
SCAF11-208ENST00000546534 DCLK1O15075 740 aa13.87□□□□□ -0.19
SCAF11-208ENST00000546534 FGF19O95750 216 aa13.87□□□□□ -0.19
SCAF11-208ENST00000546534 OR52Z1P0C646 297 aa13.87□□□□□ -0.19
SCAF11-208ENST00000546534 AARSP49588 968 aaKnown RBP eCLIP13.87□□□□□ -0.19
SCAF11-208ENST00000546534 CREB5Q02930 508 aa13.87□□□□□ -0.19
SCAF11-208ENST00000546534 SPAG1Q07617 926 aa13.87□□□□□ -0.19
SCAF11-208ENST00000546534 ACAP1Q15027 740 aa13.87□□□□□ -0.19
SCAF11-208ENST00000546534 PTPAQ15257 358 aa13.87□□□□□ -0.19
SCAF11-208ENST00000546534 ELF2Q15723 593 aa13.87□□□□□ -0.19
SCAF11-208ENST00000546534 HAUS3Q68CZ6 603 aa13.87□□□□□ -0.19
SCAF11-208ENST00000546534 USP37Q86T82 979 aa13.87□□□□□ -0.19
SCAF11-208ENST00000546534 HHIPQ96QV1 700 aa13.87□□□□□ -0.19
SCAF11-208ENST00000546534 FAM83CQ9BQN1 747 aa13.87□□□□□ -0.19
SCAF11-208ENST00000546534 SLC46A2Q9BY10 475 aa13.87□□□□□ -0.19
SCAF11-208ENST00000546534 FBRSL1Q9HCM7 1045 aaKnown RBP13.87□□□□□ -0.19
SCAF11-208ENST00000546534 HPS4Q9NQG7 708 aa13.87□□□□□ -0.19
SCAF11-208ENST00000546534 KIAA1024Q9UPX6 916 aa13.87□□□□□ -0.19
SCAF11-208ENST00000546534 RBM19Q9Y4C8 960 aaKnown RBP13.87□□□□□ -0.19
SCAF11-208ENST00000546534 BCLAF3A2AJT9 711 aaKnown RBP13.86□□□□□ -0.19
SCAF11-208ENST00000546534 SLC16A4O15374 487 aa13.86□□□□□ -0.19
SCAF11-208ENST00000546534 HIP1RO75146 1068 aa13.86□□□□□ -0.19
SCAF11-208ENST00000546534 RNF40O75150 1001 aa13.86□□□□□ -0.19
SCAF11-208ENST00000546534 LARGE1O95461 756 aa13.86□□□□□ -0.19
SCAF11-208ENST00000546534 CAVIN2O95810 425 aa13.86□□□□□ -0.19
SCAF11-208ENST00000546534 EGFP01133 1207 aa13.86□□□□□ -0.19
SCAF11-208ENST00000546534 LRPAP1P30533 357 aa13.86□□□□□ -0.19
SCAF11-208ENST00000546534 CDR1P51861 262 aa13.86□□□□□ -0.19
SCAF11-208ENST00000546534 DMP1Q13316 513 aaPredicted RBP13.86□□□□□ -0.19
SCAF11-208ENST00000546534 RUNX3Q13761 415 aa13.86□□□□□ -0.19
SCAF11-208ENST00000546534 TRIM29Q14134 588 aa13.86□□□□□ -0.19
SCAF11-208ENST00000546534 MYBPC2Q14324 1141 aa13.86□□□□□ -0.19
SCAF11-208ENST00000546534 ZNF174Q15697 407 aa13.86□□□□□ -0.19
SCAF11-208ENST00000546534 ARSIQ5FYB1 569 aa13.86□□□□□ -0.19
SCAF11-208ENST00000546534 SH3PXD2AQ5TCZ1 1133 aa13.86□□□□□ -0.19
SCAF11-208ENST00000546534 DAB2IPQ5VWQ8 1189 aa13.86□□□□□ -0.19
SCAF11-208ENST00000546534 SMYD5Q6GMV2 418 aa13.86□□□□□ -0.19
SCAF11-208ENST00000546534 OVOS1Q6IE37 1185 aa13.86□□□□□ -0.19
SCAF11-208ENST00000546534 DSTYKQ6XUX3 929 aa13.86□□□□□ -0.19
SCAF11-208ENST00000546534 ITIH5Q86UX2 942 aa13.86□□□□□ -0.19
SCAF11-208ENST00000546534 NSUN7Q8NE18 718 aaKnown RBP13.86□□□□□ -0.19
SCAF11-208ENST00000546534 LPIN3Q9BQK8 851 aa13.86□□□□□ -0.19
SCAF11-208ENST00000546534 ADAM33Q9BZ11 813 aa13.86□□□□□ -0.19
SCAF11-208ENST00000546534 IL21Q9HBE4 155 aa13.86□□□□□ -0.19
SCAF11-208ENST00000546534 ANKFY1Q9P2R3 1169 aa13.86□□□□□ -0.19
SCAF11-208ENST00000546534 LNP1A1A4G5 178 aa13.85□□□□□ -0.19
SCAF11-208ENST00000546534 TMEM8BA6NDV4 472 aa13.85□□□□□ -0.19
SCAF11-208ENST00000546534 SRRM3A6NNA2 597 aaPredicted RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms