RNA–Protein interactions for RNA: ENST00000546345.5

CCDC60-205, Transcript of coiled-coil domain containing 60, humanhuman

TSL 1 (best)

Gene CCDC60, Length 865 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-205ENST00000546345 CST3P01034 146 aaPredicted RBP7.5□□□□□ -1.21
CCDC60-205ENST00000546345 INSRRP14616 1297 aa7.5□□□□□ -1.21
CCDC60-205ENST00000546345 TCF3P15923 654 aa7.5□□□□□ -1.21
CCDC60-205ENST00000546345 KCNA2P16389 499 aa7.5□□□□□ -1.21
CCDC60-205ENST00000546345 ZNF445P59923 1031 aa7.5□□□□□ -1.21
CCDC60-205ENST00000546345 FAM189BP81408 668 aa7.5□□□□□ -1.21
CCDC60-205ENST00000546345 NEDD9Q14511 834 aa7.5□□□□□ -1.21
CCDC60-205ENST00000546345 PTPN14Q15678 1187 aa7.5□□□□□ -1.21
CCDC60-205ENST00000546345 CCDC6Q16204 474 aa7.5□□□□□ -1.21
CCDC60-205ENST00000546345 RRP12Q5JTH9 1297 aaKnown RBP7.5□□□□□ -1.21
CCDC60-205ENST00000546345 TMEM201Q5SNT2 666 aa7.5□□□□□ -1.21
CCDC60-205ENST00000546345 CABP7Q86V35 215 aa7.5□□□□□ -1.21
CCDC60-205ENST00000546345 MRPL41Q8IXM3 137 aaKnown RBP7.5□□□□□ -1.21
CCDC60-205ENST00000546345 PANK1Q8TE04 598 aa7.5□□□□□ -1.21
CCDC60-205ENST00000546345 RPP25Q9BUL9 199 aaKnown RBP7.5□□□□□ -1.21
CCDC60-205ENST00000546345 C22orf23Q9BZE7 217 aa7.5□□□□□ -1.21
CCDC60-205ENST00000546345 ELAC1Q9H777 363 aaKnown RBP7.5□□□□□ -1.21
CCDC60-205ENST00000546345 ERAP1Q9NZ08 941 aa7.5□□□□□ -1.21
CCDC60-205ENST00000546345 REV1Q9UBZ9 1251 aa7.5□□□□□ -1.21
CCDC60-205ENST00000546345 GMEB2Q9UKD1 530 aa7.5□□□□□ -1.21
CCDC60-205ENST00000546345 LAMA5O15230 3695 aa7.5□□□□□ -1.21
CCDC60-205ENST00000546345 ATG2BQ96BY7 2078 aa7.49□□□□□ -1.21
CCDC60-205ENST00000546345 KANSL1LA0AUZ9 987 aa7.49□□□□□ -1.21
CCDC60-205ENST00000546345 SRRM3A6NNA2 597 aaPredicted RBP7.49□□□□□ -1.21
CCDC60-205ENST00000546345 TAF4O00268 1085 aa7.49□□□□□ -1.21
CCDC60-205ENST00000546345 LAMTOR5O43504 91 aa7.49□□□□□ -1.21
CCDC60-205ENST00000546345 TBC1D4O60343 1298 aa7.49□□□□□ -1.21
CCDC60-205ENST00000546345 ATP9AO75110 1047 aa7.49□□□□□ -1.21
CCDC60-205ENST00000546345 HTR3BO95264 441 aa7.49□□□□□ -1.21
CCDC60-205ENST00000546345 PAPLNO95428 1278 aa7.49□□□□□ -1.21
CCDC60-205ENST00000546345 CTSAP10619 480 aa7.49□□□□□ -1.21
CCDC60-205ENST00000546345 ZNF165P49910 485 aa7.49□□□□□ -1.21
CCDC60-205ENST00000546345 METAP2P50579 478 aaKnown RBP eCLIP7.49□□□□□ -1.21
CCDC60-205ENST00000546345 CLCN4P51793 760 aa7.49□□□□□ -1.21
CCDC60-205ENST00000546345 NUCB2P80303 420 aa7.49□□□□□ -1.21
CCDC60-205ENST00000546345 HDAC1Q13547 482 aaPredicted RBP7.49□□□□□ -1.21
CCDC60-205ENST00000546345 PLCB4Q15147 1175 aa7.49□□□□□ -1.21
CCDC60-205ENST00000546345 GNPTABQ3T906 1256 aa7.49□□□□□ -1.21
CCDC60-205ENST00000546345 ASPRV1Q53RT3 343 aa7.49□□□□□ -1.21
CCDC60-205ENST00000546345 PRAMEF13Q5VWM6 474 aa7.49□□□□□ -1.21
CCDC60-205ENST00000546345 LRSAM1Q6UWE0 723 aa7.49□□□□□ -1.21
CCDC60-205ENST00000546345 C15orf39Q6ZRI6 1047 aa7.49□□□□□ -1.21
CCDC60-205ENST00000546345 CREBRFQ8IUR6 639 aa7.49□□□□□ -1.21
CCDC60-205ENST00000546345 SLITRK4Q8IW52 837 aa7.49□□□□□ -1.21
CCDC60-205ENST00000546345 VPS52Q8N1B4 723 aa7.49□□□□□ -1.21
CCDC60-205ENST00000546345 ATRIPQ8WXE1 791 aa7.49□□□□□ -1.21
CCDC60-205ENST00000546345 GLG1Q92896 1179 aa7.49□□□□□ -1.21
CCDC60-205ENST00000546345 SECISBP2LQ93073 1101 aaKnown RBP7.49□□□□□ -1.21
CCDC60-205ENST00000546345 ZNF707Q96C28 371 aaPredicted RBP7.49□□□□□ -1.21
CCDC60-205ENST00000546345 BORCS6Q96GS4 357 aa7.49□□□□□ -1.21
CCDC60-205ENST00000546345 PDLIM2Q96JY6 352 aa7.49□□□□□ -1.21
CCDC60-205ENST00000546345 AMNQ9BXJ7 453 aa7.49□□□□□ -1.21
CCDC60-205ENST00000546345 TGIF2Q9GZN2 237 aa7.49□□□□□ -1.21
CCDC60-205ENST00000546345 ATP6V0A4Q9HBG4 840 aa7.49□□□□□ -1.21
CCDC60-205ENST00000546345 LRRC4CQ9HCJ2 640 aa7.49□□□□□ -1.21
CCDC60-205ENST00000546345 WDR6Q9NNW5 1121 aaKnown RBP7.49□□□□□ -1.21
CCDC60-205ENST00000546345 RXFP3Q9NSD7 469 aa7.49□□□□□ -1.21
CCDC60-205ENST00000546345 SEMA4GQ9NTN9 838 aa7.49□□□□□ -1.21
CCDC60-205ENST00000546345 RTEL1Q9NZ71 1219 aa7.49□□□□□ -1.21
CCDC60-205ENST00000546345 ST3GAL5Q9UNP4 418 aa7.49□□□□□ -1.21
CCDC60-205ENST00000546345 PCDHB14Q9Y5E9 798 aa7.49□□□□□ -1.21
CCDC60-205ENST00000546345 PCDHA2Q9Y5H9 948 aa7.49□□□□□ -1.21
CCDC60-205ENST00000546345 PCDHA1Q9Y5I3 950 aa7.49□□□□□ -1.21
CCDC60-205ENST00000546345 NUMBLQ9Y6R0 609 aa7.49□□□□□ -1.21
CCDC60-205ENST00000546345 ARID2Q68CP9 1835 aa7.49□□□□□ -1.21
CCDC60-205ENST00000546345 ZMYM6O95789 1325 aa7.49□□□□□ -1.21
CCDC60-205ENST00000546345 CACNA1EQ15878 2313 aa7.49□□□□□ -1.21
CCDC60-205ENST00000546345 SHROOM3Q8TF72 1996 aa7.48□□□□□ -1.21
CCDC60-205ENST00000546345 DENND3A2RUS2 1198 aa7.48□□□□□ -1.21
CCDC60-205ENST00000546345 M0QZ92 97 aa7.48□□□□□ -1.21
CCDC60-205ENST00000546345 LRP3O75074 770 aa7.48□□□□□ -1.21
CCDC60-205ENST00000546345 RPS6KA5O75582 802 aa7.48□□□□□ -1.21
CCDC60-205ENST00000546345 CXCL14O95715 111 aa7.48□□□□□ -1.21
CCDC60-205ENST00000546345 RPLP2P05387 115 aaKnown RBP7.48□□□□□ -1.21
CCDC60-205ENST00000546345 FOSL1P15407 271 aa7.48□□□□□ -1.21
CCDC60-205ENST00000546345 SSTR4P31391 388 aa7.48□□□□□ -1.21
CCDC60-205ENST00000546345 CA8P35219 290 aa7.48□□□□□ -1.21
CCDC60-205ENST00000546345 NASPP49321 788 aaPredicted RBP7.48□□□□□ -1.21
CCDC60-205ENST00000546345 YARSP54577 528 aaKnown RBP7.48□□□□□ -1.21
CCDC60-205ENST00000546345 BCAR1P56945 870 aa7.48□□□□□ -1.21
CCDC60-205ENST00000546345 KRT17Q04695 432 aa7.48□□□□□ -1.21
CCDC60-205ENST00000546345 FZD5Q13467 585 aa7.48□□□□□ -1.21
CCDC60-205ENST00000546345 CSRP2Q16527 193 aa7.48□□□□□ -1.21
CCDC60-205ENST00000546345 LAIR1Q6GTX8 287 aa7.48□□□□□ -1.21
CCDC60-205ENST00000546345 REXO1Q8N1G1 1221 aaKnown RBP7.48□□□□□ -1.21
CCDC60-205ENST00000546345 CMASQ8NFW8 434 aaPredicted RBP7.48□□□□□ -1.21
CCDC60-205ENST00000546345 PI4K2BQ8TCG2 481 aa7.48□□□□□ -1.21
CCDC60-205ENST00000546345 CLDN23Q96B33 292 aa7.48□□□□□ -1.21
CCDC60-205ENST00000546345 TTC14Q96N46 770 aa7.48□□□□□ -1.21
CCDC60-205ENST00000546345 MIPEPQ99797 713 aa7.48□□□□□ -1.21
CCDC60-205ENST00000546345 SENP7Q9BQF6 1050 aa7.48□□□□□ -1.21
CCDC60-205ENST00000546345 RHOBTB2Q9BYZ6 727 aa7.48□□□□□ -1.21
CCDC60-205ENST00000546345 LRRCC1Q9C099 1032 aa7.48□□□□□ -1.21
CCDC60-205ENST00000546345 LTB4R2Q9NPC1 389 aa7.48□□□□□ -1.21
CCDC60-205ENST00000546345 TOMM22Q9NS69 142 aa7.48□□□□□ -1.21
CCDC60-205ENST00000546345 MAP3K20Q9NYL2 800 aaKnown RBP7.48□□□□□ -1.21
CCDC60-205ENST00000546345 CCDC39Q9UFE4 941 aa7.48□□□□□ -1.21
CCDC60-205ENST00000546345 PRDM4Q9UKN5 801 aa7.48□□□□□ -1.21
CCDC60-205ENST00000546345 PTPRDP23468 1912 aa7.48□□□□□ -1.21
CCDC60-205ENST00000546345 PLXNB3Q9ULL4 1909 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms