RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 SLC38A8A6NNN8 435 aa13.62□□□□□ -0.23
COPS7A-221ENST00000546229 SPECC1L-ADORA2AF8WAN1 911 aa13.62□□□□□ -0.23
COPS7A-221ENST00000546229 K7ENM7 598 aa13.62□□□□□ -0.23
COPS7A-221ENST00000546229 ODC1P11926 461 aa13.62□□□□□ -0.23
COPS7A-221ENST00000546229 PLCG1P19174 1290 aa13.62□□□□□ -0.23
COPS7A-221ENST00000546229 SCP2P22307 547 aa13.62□□□□□ -0.23
COPS7A-221ENST00000546229 GJB2P29033 226 aa13.62□□□□□ -0.23
COPS7A-221ENST00000546229 LIG4P49917 911 aa13.62□□□□□ -0.23
COPS7A-221ENST00000546229 KYAT1Q16773 422 aa13.62□□□□□ -0.23
COPS7A-221ENST00000546229 DNAJB7Q7Z6W7 309 aaPredicted RBP13.62□□□□□ -0.23
COPS7A-221ENST00000546229 LRRTM3Q86VH5 581 aa13.62□□□□□ -0.23
COPS7A-221ENST00000546229 SPEM1Q8N4L4 309 aa13.62□□□□□ -0.23
COPS7A-221ENST00000546229 GPR161Q8N6U8 529 aaKnown RBP13.62□□□□□ -0.23
COPS7A-221ENST00000546229 CXorf38Q8TB03 319 aa13.62□□□□□ -0.23
COPS7A-221ENST00000546229 RAD54LQ92698 747 aa13.62□□□□□ -0.23
COPS7A-221ENST00000546229 E2F7Q96AV8 911 aa13.62□□□□□ -0.23
COPS7A-221ENST00000546229 ZFYVE19Q96K21 471 aa13.62□□□□□ -0.23
COPS7A-221ENST00000546229 LPIN3Q9BQK8 851 aa13.62□□□□□ -0.23
COPS7A-221ENST00000546229 PARVGQ9HBI0 331 aa13.62□□□□□ -0.23
COPS7A-221ENST00000546229 DERAQ9Y315 318 aa13.62□□□□□ -0.23
COPS7A-221ENST00000546229 C2CD2Q9Y426 696 aa13.62□□□□□ -0.23
COPS7A-221ENST00000546229 ASB3Q9Y575 518 aa13.62□□□□□ -0.23
COPS7A-221ENST00000546229 FRYQ5TBA9 3013 aa13.62□□□□□ -0.23
COPS7A-221ENST00000546229 ASPMQ8IZT6 3477 aa13.61□□□□□ -0.23
COPS7A-221ENST00000546229 GREB1Q4ZG55 1949 aa13.61□□□□□ -0.23
COPS7A-221ENST00000546229 MAP1BP46821 2468 aaKnown RBP13.61□□□□□ -0.23
COPS7A-221ENST00000546229 HRO43593 1189 aa13.61□□□□□ -0.23
COPS7A-221ENST00000546229 MARCKSP29966 332 aaPredicted RBP13.61□□□□□ -0.23
COPS7A-221ENST00000546229 NMT1P30419 496 aaKnown RBP13.61□□□□□ -0.23
COPS7A-221ENST00000546229 ADSSP30520 456 aa13.61□□□□□ -0.23
COPS7A-221ENST00000546229 EPHB3P54753 998 aa13.61□□□□□ -0.23
COPS7A-221ENST00000546229 CYP4F8P98187 520 aa13.61□□□□□ -0.23
COPS7A-221ENST00000546229 LMNB2Q03252 620 aa13.61□□□□□ -0.23
COPS7A-221ENST00000546229 SRSF5Q13243 272 aaKnown RBP13.61□□□□□ -0.23
COPS7A-221ENST00000546229 MCM6Q14566 821 aa13.61□□□□□ -0.23
COPS7A-221ENST00000546229 KARSQ15046 597 aaKnown RBP13.61□□□□□ -0.23
COPS7A-221ENST00000546229 RABEP1Q15276 862 aa13.61□□□□□ -0.23
COPS7A-221ENST00000546229 SCARA3Q6AZY7 606 aa13.61□□□□□ -0.23
COPS7A-221ENST00000546229 MCTP1Q6DN14 999 aa13.61□□□□□ -0.23
COPS7A-221ENST00000546229 LAIR1Q6GTX8 287 aa13.61□□□□□ -0.23
COPS7A-221ENST00000546229 PKN3Q6P5Z2 889 aa13.61□□□□□ -0.23
COPS7A-221ENST00000546229 BICD1Q96G01 975 aa13.61□□□□□ -0.23
COPS7A-221ENST00000546229 MSTO1Q9BUK6 570 aa13.61□□□□□ -0.23
COPS7A-221ENST00000546229 C8orf33Q9H7E9 229 aaPredicted RBP13.61□□□□□ -0.23
COPS7A-221ENST00000546229 RPF1Q9H9Y2 349 aaKnown RBP13.61□□□□□ -0.23
COPS7A-221ENST00000546229 GTSE1Q9NYZ3 720 aa13.61□□□□□ -0.23
COPS7A-221ENST00000546229 OTOL1A6NHN0 477 aaPredicted RBP13.6□□□□□ -0.23
COPS7A-221ENST00000546229 XPOTO43592 962 aaKnown RBP13.6□□□□□ -0.23
COPS7A-221ENST00000546229 TRAK2O60296 914 aa13.6□□□□□ -0.23
COPS7A-221ENST00000546229 TADA3O75528 432 aa13.6□□□□□ -0.23
COPS7A-221ENST00000546229 HMGA1P17096 107 aaKnown RBP13.6□□□□□ -0.23
COPS7A-221ENST00000546229 PAX3P23760 479 aa13.6□□□□□ -0.23
COPS7A-221ENST00000546229 GABRR2P28476 465 aa13.6□□□□□ -0.23
COPS7A-221ENST00000546229 HOXA6P31267 233 aa13.6□□□□□ -0.23
COPS7A-221ENST00000546229 NRLP54845 237 aa13.6□□□□□ -0.23
COPS7A-221ENST00000546229 TNK2Q07912 1038 aa13.6□□□□□ -0.23
COPS7A-221ENST00000546229 TMEM132DQ14C87 1099 aa13.6□□□□□ -0.23
COPS7A-221ENST00000546229 ZC2HC1CQ53FD0 456 aaPredicted RBP13.6□□□□□ -0.23
COPS7A-221ENST00000546229 DSTYKQ6XUX3 929 aa13.6□□□□□ -0.23
COPS7A-221ENST00000546229 USP49Q70CQ1 688 aa13.6□□□□□ -0.23
COPS7A-221ENST00000546229 USP37Q86T82 979 aa13.6□□□□□ -0.23
COPS7A-221ENST00000546229 RALGPS2Q86X27 583 aaPredicted RBP13.6□□□□□ -0.23
COPS7A-221ENST00000546229 GPIHBP1Q8IV16 184 aa13.6□□□□□ -0.23
COPS7A-221ENST00000546229 CD302Q8IX05 232 aa13.6□□□□□ -0.23
COPS7A-221ENST00000546229 CELF5Q8N6W0 485 aaKnown RBP13.6□□□□□ -0.23
COPS7A-221ENST00000546229 PKMYT1Q99640 499 aa13.6□□□□□ -0.23
COPS7A-221ENST00000546229 SLITRK6Q9H5Y7 841 aa13.6□□□□□ -0.23
COPS7A-221ENST00000546229 HPS4Q9NQG7 708 aa13.6□□□□□ -0.23
COPS7A-221ENST00000546229 TMLHEQ9NVH6 421 aa13.6□□□□□ -0.23
COPS7A-221ENST00000546229 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.6□□□□□ -0.23
COPS7A-221ENST00000546229 WDFY3Q8IZQ1 3526 aa13.59□□□□□ -0.23
COPS7A-221ENST00000546229 PTPRDP23468 1912 aa13.59□□□□□ -0.23
COPS7A-221ENST00000546229 HELZP42694 1942 aaKnown RBP13.59□□□□□ -0.23
COPS7A-221ENST00000546229 ANAPC1Q9H1A4 1944 aa13.59□□□□□ -0.23
COPS7A-221ENST00000546229 PRR5-ARHGAP8B1AHC4 643 aa13.59□□□□□ -0.23
COPS7A-221ENST00000546229 CHURC1-FNTBB4DL54 471 aa13.59□□□□□ -0.23
COPS7A-221ENST00000546229 LRP3O75074 770 aa13.59□□□□□ -0.23
COPS7A-221ENST00000546229 RETP07949 1114 aa13.59□□□□□ -0.23
COPS7A-221ENST00000546229 MATR3P43243 847 aaKnown RBP eCLIP13.59□□□□□ -0.23
COPS7A-221ENST00000546229 ALDH1A3P47895 512 aa13.59□□□□□ -0.23
COPS7A-221ENST00000546229 CXCL12P48061 93 aa13.59□□□□□ -0.23
COPS7A-221ENST00000546229 FNTBP49356 437 aa13.59□□□□□ -0.23
COPS7A-221ENST00000546229 ACOT2P49753 483 aa13.59□□□□□ -0.23
COPS7A-221ENST00000546229 CDR1P51861 262 aa13.59□□□□□ -0.23
COPS7A-221ENST00000546229 ARHGAP8P85298 464 aa13.59□□□□□ -0.23
COPS7A-221ENST00000546229 POU5F1Q01860 360 aaKnown RBP13.59□□□□□ -0.23
COPS7A-221ENST00000546229 LPAL2Q16609 132 aa13.59□□□□□ -0.23
COPS7A-221ENST00000546229 SLC39A12Q504Y0 691 aa13.59□□□□□ -0.23
COPS7A-221ENST00000546229 ARHGAP29Q52LW3 1261 aa13.59□□□□□ -0.23
COPS7A-221ENST00000546229 GPR158Q5T848 1215 aa13.59□□□□□ -0.23
COPS7A-221ENST00000546229 C1orf228Q6PIY5 440 aa13.59□□□□□ -0.23
COPS7A-221ENST00000546229 MYCT1Q8N699 235 aa13.59□□□□□ -0.23
COPS7A-221ENST00000546229 ZSWIM2Q8NEG5 633 aa13.59□□□□□ -0.23
COPS7A-221ENST00000546229 CDK5RAP3Q96JB5 506 aa13.59□□□□□ -0.23
COPS7A-221ENST00000546229 FAM83CQ9BQN1 747 aa13.59□□□□□ -0.23
COPS7A-221ENST00000546229 SLC46A2Q9BY10 475 aa13.59□□□□□ -0.23
COPS7A-221ENST00000546229 SMG9Q9H0W8 520 aaKnown RBP13.59□□□□□ -0.23
COPS7A-221ENST00000546229 ASB7Q9H672 318 aa13.59□□□□□ -0.23
COPS7A-221ENST00000546229 TASP1Q9H6P5 420 aa13.59□□□□□ -0.23
COPS7A-221ENST00000546229 CCL26Q9Y258 94 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms