RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 DPH6Q7L8W6 267 aa12.77□□□□□ -0.37
YBX3-217ENST00000546164 GRASPQ7Z6J2 395 aaPredicted RBP12.77□□□□□ -0.37
YBX3-217ENST00000546164 THEM5Q8N1Q8 247 aa12.77□□□□□ -0.37
YBX3-217ENST00000546164 TMEM86AQ8N2M4 240 aa12.77□□□□□ -0.37
YBX3-217ENST00000546164 PDCL2Q8N4E4 241 aa12.77□□□□□ -0.37
YBX3-217ENST00000546164 TOP6BLQ8N6T0 577 aa12.77□□□□□ -0.37
YBX3-217ENST00000546164 PLEKHO2Q8TD55 490 aa12.77□□□□□ -0.37
YBX3-217ENST00000546164 TMC2Q8TDI7 906 aa12.77□□□□□ -0.37
YBX3-217ENST00000546164 PARD3BQ8TEW8 1205 aa12.77□□□□□ -0.37
YBX3-217ENST00000546164 EDAQ92838 391 aa12.77□□□□□ -0.37
YBX3-217ENST00000546164 HPDLQ96IR7 371 aa12.77□□□□□ -0.37
YBX3-217ENST00000546164 ZCWPW1Q9H0M4 648 aa12.77□□□□□ -0.37
YBX3-217ENST00000546164 C11orf16Q9NQ32 467 aa12.77□□□□□ -0.37
YBX3-217ENST00000546164 DNMT3BQ9UBC3 853 aaKnown RBP12.77□□□□□ -0.37
YBX3-217ENST00000546164 L1RE1Q9UN81 338 aa12.77□□□□□ -0.37
YBX3-217ENST00000546164 R3HCC1Q9Y3T6 440 aaKnown RBP12.77□□□□□ -0.37
YBX3-217ENST00000546164 PCDHA5Q9Y5H7 936 aa12.77□□□□□ -0.37
YBX3-217ENST00000546164 ZFP37Q9Y6Q3 630 aaPredicted RBP12.77□□□□□ -0.37
YBX3-217ENST00000546164 TSC2P49815 1807 aa12.76□□□□□ -0.37
YBX3-217ENST00000546164 MTMR11A4FU01 709 aa12.76□□□□□ -0.37
YBX3-217ENST00000546164 LRRIQ3A6PVS8 624 aaPredicted RBP12.76□□□□□ -0.37
YBX3-217ENST00000546164 GABRDO14764 452 aa12.76□□□□□ -0.37
YBX3-217ENST00000546164 OR4Q2P0C623 313 aa12.76□□□□□ -0.37
YBX3-217ENST00000546164 FSHRP23945 695 aa12.76□□□□□ -0.37
YBX3-217ENST00000546164 NR2F2P24468 414 aa12.76□□□□□ -0.37
YBX3-217ENST00000546164 RPL13P26373 211 aaKnown RBP12.76□□□□□ -0.37
YBX3-217ENST00000546164 CASP4P49662 377 aa12.76□□□□□ -0.37
YBX3-217ENST00000546164 MCCD1P59942 119 aaPredicted RBP12.76□□□□□ -0.37
YBX3-217ENST00000546164 BFSP1Q12934 665 aa12.76□□□□□ -0.37
YBX3-217ENST00000546164 EDRF1Q3B7T1 1238 aa12.76□□□□□ -0.37
YBX3-217ENST00000546164 C2orf15Q8WU43 125 aaKnown RBP12.76□□□□□ -0.37
YBX3-217ENST00000546164 ZNF516Q92618 1163 aa12.76□□□□□ -0.37
YBX3-217ENST00000546164 SMARCE1Q969G3 411 aa12.76□□□□□ -0.37
YBX3-217ENST00000546164 MYADMQ96S97 322 aa12.76□□□□□ -0.37
YBX3-217ENST00000546164 CRISPLD1Q9H336 500 aa12.76□□□□□ -0.37
YBX3-217ENST00000546164 POLIQ9UNA4 740 aa12.76□□□□□ -0.37
YBX3-217ENST00000546164 SORCS3Q9UPU3 1222 aa12.76□□□□□ -0.37
YBX3-217ENST00000546164 MAPK8IP1Q9UQF2 711 aa12.76□□□□□ -0.37
YBX3-217ENST00000546164 YIPF1Q9Y548 306 aa12.76□□□□□ -0.37
YBX3-217ENST00000546164 SNX9Q9Y5X1 595 aa12.76□□□□□ -0.37
YBX3-217ENST00000546164 DOCK8Q8NF50 2099 aa12.76□□□□□ -0.37
YBX3-217ENST00000546164 TECTAO75443 2155 aa12.76□□□□□ -0.37
YBX3-217ENST00000546164 TULP1O00294 542 aaPredicted RBP12.75□□□□□ -0.37
YBX3-217ENST00000546164 IKBKBO14920 756 aa12.75□□□□□ -0.37
YBX3-217ENST00000546164 CST3P01034 146 aaPredicted RBP12.75□□□□□ -0.37
YBX3-217ENST00000546164 FAM163BP0C2L3 166 aa12.75□□□□□ -0.37
YBX3-217ENST00000546164 LAMP2P13473 410 aa12.75□□□□□ -0.37
YBX3-217ENST00000546164 PTPN2P17706 415 aa12.75□□□□□ -0.37
YBX3-217ENST00000546164 ATICP31939 592 aa12.75□□□□□ -0.37
YBX3-217ENST00000546164 GBP2P32456 591 aaPredicted RBP12.75□□□□□ -0.37
YBX3-217ENST00000546164 LHX1P48742 406 aa12.75□□□□□ -0.37
YBX3-217ENST00000546164 EPHA5P54756 1037 aa12.75□□□□□ -0.37
YBX3-217ENST00000546164 UBE2HP62256 183 aa12.75□□□□□ -0.37
YBX3-217ENST00000546164 NTHL1P78549 312 aa12.75□□□□□ -0.37
YBX3-217ENST00000546164 ZXDAP98168 799 aa12.75□□□□□ -0.37
YBX3-217ENST00000546164 DUSP4Q13115 394 aa12.75□□□□□ -0.37
YBX3-217ENST00000546164 PLD1Q13393 1074 aa12.75□□□□□ -0.37
YBX3-217ENST00000546164 SOWAHAQ2M3V2 549 aa12.75□□□□□ -0.37
YBX3-217ENST00000546164 PABPC1LQ4VXU2 614 aaKnown RBP12.75□□□□□ -0.37
YBX3-217ENST00000546164 TMEM31Q5JXX7 168 aa12.75□□□□□ -0.37
YBX3-217ENST00000546164 CLEC17AQ6ZS10 378 aa12.75□□□□□ -0.37
YBX3-217ENST00000546164 GET4Q7L5D6 327 aaPredicted RBP12.75□□□□□ -0.37
YBX3-217ENST00000546164 SMYD4Q8IYR2 804 aaPredicted RBP12.75□□□□□ -0.37
YBX3-217ENST00000546164 ATAD1Q8NBU5 361 aa12.75□□□□□ -0.37
YBX3-217ENST00000546164 LEMD2Q8NC56 503 aa12.75□□□□□ -0.37
YBX3-217ENST00000546164 NXPE3Q969Y0 559 aa12.75□□□□□ -0.37
YBX3-217ENST00000546164 PGLYRP2Q96PD5 576 aa12.75□□□□□ -0.37
YBX3-217ENST00000546164 TMEM209Q96SK2 561 aa12.75□□□□□ -0.37
YBX3-217ENST00000546164 ACBD6Q9BR61 282 aa12.75□□□□□ -0.37
YBX3-217ENST00000546164 MKNK1Q9BUB5 465 aa12.75□□□□□ -0.37
YBX3-217ENST00000546164 VRTNQ9H8Y1 702 aa12.75□□□□□ -0.37
YBX3-217ENST00000546164 IGSF9Q9P2J2 1179 aa12.75□□□□□ -0.37
YBX3-217ENST00000546164 LIMD1Q9UGP4 676 aa12.75□□□□□ -0.37
YBX3-217ENST00000546164 CDH7Q9ULB5 785 aa12.75□□□□□ -0.37
YBX3-217ENST00000546164 FRMD4BQ9Y2L6 1034 aa12.75□□□□□ -0.37
YBX3-217ENST00000546164 PRR33A8MZF0 331 aa12.74□□□□□ -0.37
YBX3-217ENST00000546164 AKAP3O75969 853 aa12.74□□□□□ -0.37
YBX3-217ENST00000546164 MICAL2O94851 1124 aa12.74□□□□□ -0.37
YBX3-217ENST00000546164 C4BPAP04003 597 aaKnown RBP12.74□□□□□ -0.37
YBX3-217ENST00000546164 ASGR2P07307 311 aa12.74□□□□□ -0.37
YBX3-217ENST00000546164 RHOP08100 348 aa12.74□□□□□ -0.37
YBX3-217ENST00000546164 PSMC2P35998 433 aaKnown RBP12.74□□□□□ -0.37
YBX3-217ENST00000546164 PRCPP42785 496 aa12.74□□□□□ -0.37
YBX3-217ENST00000546164 MYL7Q01449 175 aa12.74□□□□□ -0.37
YBX3-217ENST00000546164 TSPY1Q01534 308 aa12.74□□□□□ -0.37
YBX3-217ENST00000546164 TWF1Q12792 350 aa12.74□□□□□ -0.37
YBX3-217ENST00000546164 MTMR3Q13615 1198 aa12.74□□□□□ -0.37
YBX3-217ENST00000546164 NFE2Q16621 373 aaPredicted RBP12.74□□□□□ -0.37
YBX3-217ENST00000546164 TDRD10Q5VZ19 366 aaKnown RBP12.74□□□□□ -0.37
YBX3-217ENST00000546164 CEP135Q66GS9 1140 aa12.74□□□□□ -0.37
YBX3-217ENST00000546164 IQCEQ6IPM2 695 aa12.74□□□□□ -0.37
YBX3-217ENST00000546164 TRIM67Q6ZTA4 783 aa12.74□□□□□ -0.37
YBX3-217ENST00000546164 INTS8Q75QN2 995 aaKnown RBP12.74□□□□□ -0.37
YBX3-217ENST00000546164 LRRTM3Q86VH5 581 aa12.74□□□□□ -0.37
YBX3-217ENST00000546164 OSTM1Q86WC4 334 aa12.74□□□□□ -0.37
YBX3-217ENST00000546164 ZC3H3Q8IXZ2 948 aaKnown RBP12.74□□□□□ -0.37
YBX3-217ENST00000546164 UBALD2Q8IYN6 164 aa12.74□□□□□ -0.37
YBX3-217ENST00000546164 DCP1BQ8IZD4 617 aaKnown RBP12.74□□□□□ -0.37
YBX3-217ENST00000546164 ADGRF2Q8IZF7 708 aa12.74□□□□□ -0.37
YBX3-217ENST00000546164 ADSSL1Q8N142 457 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms