RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 CDH8P55286 799 aa6.76□□□□□ -1.33
LTBR-212ENST00000543542 YWHAEP62258 255 aaKnown RBP6.76□□□□□ -1.33
LTBR-212ENST00000543542 PLCB2Q00722 1185 aa6.76□□□□□ -1.33
LTBR-212ENST00000543542 HYAL1Q12794 435 aa6.76□□□□□ -1.33
LTBR-212ENST00000543542 KRT31Q15323 416 aa6.76□□□□□ -1.33
LTBR-212ENST00000543542 DUSP6Q16828 381 aa6.76□□□□□ -1.33
LTBR-212ENST00000543542 SLC39A12Q504Y0 691 aa6.76□□□□□ -1.33
LTBR-212ENST00000543542 LIN9Q5TKA1 542 aa6.76□□□□□ -1.33
LTBR-212ENST00000543542 SCARA3Q6AZY7 606 aa6.76□□□□□ -1.33
LTBR-212ENST00000543542 C15orf39Q6ZRI6 1047 aa6.76□□□□□ -1.33
LTBR-212ENST00000543542 SPATA31D4Q6ZUB0 917 aa6.76□□□□□ -1.33
LTBR-212ENST00000543542 DPH6Q7L8W6 267 aa6.76□□□□□ -1.33
LTBR-212ENST00000543542 LUZP1Q86V48 1076 aa6.76□□□□□ -1.33
LTBR-212ENST00000543542 IRF2BP1Q8IU81 584 aa6.76□□□□□ -1.33
LTBR-212ENST00000543542 DHX40Q8IX18 779 aaKnown RBP6.76□□□□□ -1.33
LTBR-212ENST00000543542 RNF168Q8IYW5 571 aaPredicted RBP6.76□□□□□ -1.33
LTBR-212ENST00000543542 DCP1BQ8IZD4 617 aaKnown RBP6.76□□□□□ -1.33
LTBR-212ENST00000543542 PPM1KQ8N3J5 372 aa6.76□□□□□ -1.33
LTBR-212ENST00000543542 PDCL2Q8N4E4 241 aa6.76□□□□□ -1.33
LTBR-212ENST00000543542 RNF214Q8ND24 703 aa6.76□□□□□ -1.33
LTBR-212ENST00000543542 EHBP1Q8NDI1 1231 aa6.76□□□□□ -1.33
LTBR-212ENST00000543542 FAM200AQ8TCP9 573 aa6.76□□□□□ -1.33
LTBR-212ENST00000543542 CASP10Q92851 521 aa6.76□□□□□ -1.33
LTBR-212ENST00000543542 SEMA4DQ92854 862 aa6.76□□□□□ -1.33
LTBR-212ENST00000543542 CRACR2AQ9BSW2 395 aa6.76□□□□□ -1.33
LTBR-212ENST00000543542 OXCT2Q9BYC2 517 aaPredicted RBP6.76□□□□□ -1.33
LTBR-212ENST00000543542 NIF3L1Q9GZT8 377 aa6.76□□□□□ -1.33
LTBR-212ENST00000543542 INTS2Q9H0H0 1204 aaKnown RBP6.76□□□□□ -1.33
LTBR-212ENST00000543542 NDST4Q9H3R1 872 aa6.76□□□□□ -1.33
LTBR-212ENST00000543542 SMYD3Q9H7B4 428 aa6.76□□□□□ -1.33
LTBR-212ENST00000543542 RXFP1Q9HBX9 757 aa6.76□□□□□ -1.33
LTBR-212ENST00000543542 GCNT4Q9P109 453 aa6.76□□□□□ -1.33
LTBR-212ENST00000543542 FNIP2Q9P278 1114 aa6.76□□□□□ -1.33
LTBR-212ENST00000543542 MTRRQ9UBK8 725 aa6.76□□□□□ -1.33
LTBR-212ENST00000543542 FBXL5Q9UKA1 691 aa6.76□□□□□ -1.33
LTBR-212ENST00000543542 BACE2Q9Y5Z0 518 aa6.76□□□□□ -1.33
LTBR-212ENST00000543542 IRAK3Q9Y616 596 aa6.76□□□□□ -1.33
LTBR-212ENST00000543542 LAMA3Q16787 3333 aa6.76□□□□□ -1.33
LTBR-212ENST00000543542 PLXNA3P51805 1871 aa6.75□□□□□ -1.33
LTBR-212ENST00000543542 OAZ2O95190 189 aa6.75□□□□□ -1.33
LTBR-212ENST00000543542 EFEMP2O95967 443 aa6.75□□□□□ -1.33
LTBR-212ENST00000543542 ASS1P00966 412 aaKnown RBP6.75□□□□□ -1.33
LTBR-212ENST00000543542 CYP11A1P05108 521 aa6.75□□□□□ -1.33
LTBR-212ENST00000543542 WEE2P0C1S8 567 aa6.75□□□□□ -1.33
LTBR-212ENST00000543542 OR4Q2P0C623 313 aa6.75□□□□□ -1.33
LTBR-212ENST00000543542 EPCAMP16422 314 aa6.75□□□□□ -1.33
LTBR-212ENST00000543542 WARSP23381 471 aaKnown RBP6.75□□□□□ -1.33
LTBR-212ENST00000543542 TBXAS1P24557 533 aaPredicted RBP6.75□□□□□ -1.33
LTBR-212ENST00000543542 CLCN4P51793 760 aa6.75□□□□□ -1.33
LTBR-212ENST00000543542 CDR1P51861 262 aa6.75□□□□□ -1.33
LTBR-212ENST00000543542 COPB1P53618 953 aaKnown RBP6.75□□□□□ -1.33
LTBR-212ENST00000543542 CYP27A1Q02318 531 aa6.75□□□□□ -1.33
LTBR-212ENST00000543542 UBXN1Q04323 297 aa6.75□□□□□ -1.33
LTBR-212ENST00000543542 IQCB1Q15051 598 aa6.75□□□□□ -1.33
LTBR-212ENST00000543542 EXOC3L4Q17RC7 722 aa6.75□□□□□ -1.33
LTBR-212ENST00000543542 SOWAHAQ2M3V2 549 aa6.75□□□□□ -1.33
LTBR-212ENST00000543542 ZNF394Q53GI3 561 aa6.75□□□□□ -1.33
LTBR-212ENST00000543542 CDKAL1Q5VV42 579 aa6.75□□□□□ -1.33
LTBR-212ENST00000543542 SPATA2LQ8IUW3 424 aaPredicted RBP6.75□□□□□ -1.33
LTBR-212ENST00000543542 GPR65Q8IYL9 337 aa6.75□□□□□ -1.33
LTBR-212ENST00000543542 TTC39CQ8N584 583 aa6.75□□□□□ -1.33
LTBR-212ENST00000543542 EFHBQ8N7U6 833 aa6.75□□□□□ -1.33
LTBR-212ENST00000543542 KREMEN2Q8NCW0 462 aa6.75□□□□□ -1.33
LTBR-212ENST00000543542 CXorf38Q8TB03 319 aa6.75□□□□□ -1.33
LTBR-212ENST00000543542 SPATA18Q8TC71 538 aa6.75□□□□□ -1.33
LTBR-212ENST00000543542 TATDN2Q93075 761 aa6.75□□□□□ -1.33
LTBR-212ENST00000543542 TNIP3Q96KP6 325 aa6.75□□□□□ -1.33
LTBR-212ENST00000543542 PGLYRP2Q96PD5 576 aa6.75□□□□□ -1.33
LTBR-212ENST00000543542 SYT15Q9BQS2 421 aa6.75□□□□□ -1.33
LTBR-212ENST00000543542 CLSTN3Q9BQT9 956 aa6.75□□□□□ -1.33
LTBR-212ENST00000543542 MRPL45Q9BRJ2 306 aaKnown RBP6.75□□□□□ -1.33
LTBR-212ENST00000543542 MED10Q9BTT4 135 aa6.75□□□□□ -1.33
LTBR-212ENST00000543542 APOL5Q9BWW9 433 aa6.75□□□□□ -1.33
LTBR-212ENST00000543542 XYLT2Q9H1B5 865 aa6.75□□□□□ -1.33
LTBR-212ENST00000543542 VRTNQ9H8Y1 702 aa6.75□□□□□ -1.33
LTBR-212ENST00000543542 CYP3A43Q9HB55 503 aa6.75□□□□□ -1.33
LTBR-212ENST00000543542 CYP4F11Q9HBI6 524 aa6.75□□□□□ -1.33
LTBR-212ENST00000543542 APOBEC3GQ9HC16 384 aaKnown RBP6.75□□□□□ -1.33
LTBR-212ENST00000543542 MAN1C1Q9NR34 630 aa6.75□□□□□ -1.33
LTBR-212ENST00000543542 LIMA1Q9UHB6 759 aaKnown RBP6.75□□□□□ -1.33
LTBR-212ENST00000543542 CDH9Q9ULB4 789 aa6.75□□□□□ -1.33
LTBR-212ENST00000543542 STXBP5LQ9Y2K9 1186 aa6.75□□□□□ -1.33
LTBR-212ENST00000543542 HCFC2Q9Y5Z7 792 aa6.75□□□□□ -1.33
LTBR-212ENST00000543542 PMM2O15305 246 aa6.74□□□□□ -1.33
LTBR-212ENST00000543542 LINC01565O15544 149 aa6.74□□□□□ -1.33
LTBR-212ENST00000543542 ADAM12O43184 909 aa6.74□□□□□ -1.33
LTBR-212ENST00000543542 TGM5O43548 720 aa6.74□□□□□ -1.33
LTBR-212ENST00000543542 LILRB3O75022 631 aa6.74□□□□□ -1.33
LTBR-212ENST00000543542 LRRN2O75325 713 aa6.74□□□□□ -1.33
LTBR-212ENST00000543542 TACC1O75410 805 aa6.74□□□□□ -1.33
LTBR-212ENST00000543542 LRG1P02750 347 aa6.74□□□□□ -1.33
LTBR-212ENST00000543542 TPM3P06753 285 aa6.74□□□□□ -1.33
LTBR-212ENST00000543542 FAM163BP0C2L3 166 aa6.74□□□□□ -1.33
LTBR-212ENST00000543542 ATP1A3P13637 1013 aa6.74□□□□□ -1.33
LTBR-212ENST00000543542 KRT5P13647 590 aa6.74□□□□□ -1.33
LTBR-212ENST00000543542 SLC9A1P19634 815 aa6.74□□□□□ -1.33
LTBR-212ENST00000543542 USP8P40818 1118 aa6.74□□□□□ -1.33
LTBR-212ENST00000543542 ASPAP45381 313 aa6.74□□□□□ -1.33
LTBR-212ENST00000543542 NDST1P52848 882 aa6.74□□□□□ -1.33
LTBR-212ENST00000543542 MFAP3P55082 362 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms