RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 ZKSCAN5Q9Y2L8 839 aa11.39□□□□□ -0.59
DDB1-221ENST00000543162 EPN1Q9Y6I3 576 aaPredicted RBP11.39□□□□□ -0.59
DDB1-221ENST00000543162 SLC4A7Q9Y6M7 1214 aa11.39□□□□□ -0.59
DDB1-221ENST00000543162 F8W810 466 aa11.38□□□□□ -0.59
DDB1-221ENST00000543162 I3L4J1 428 aa11.38□□□□□ -0.59
DDB1-221ENST00000543162 THAP12O43422 761 aa11.38□□□□□ -0.59
DDB1-221ENST00000543162 NDUFA10O95299 355 aa11.38□□□□□ -0.59
DDB1-221ENST00000543162 IPO7O95373 1038 aaKnown RBP11.38□□□□□ -0.59
DDB1-221ENST00000543162 CALCAP01258 141 aa11.38□□□□□ -0.59
DDB1-221ENST00000543162 ITGB1P05556 798 aa11.38□□□□□ -0.59
DDB1-221ENST00000543162 GALTP07902 379 aa11.38□□□□□ -0.59
DDB1-221ENST00000543162 PAEPP09466 180 aa11.38□□□□□ -0.59
DDB1-221ENST00000543162 TNFAIP3P21580 790 aa11.38□□□□□ -0.59
DDB1-221ENST00000543162 WARSP23381 471 aaKnown RBP11.38□□□□□ -0.59
DDB1-221ENST00000543162 GNA15P30679 374 aa11.38□□□□□ -0.59
DDB1-221ENST00000543162 GNL1P36915 607 aaPredicted RBP11.38□□□□□ -0.59
DDB1-221ENST00000543162 BRCC3P46736 316 aa11.38□□□□□ -0.59
DDB1-221ENST00000543162 ALDH7A1P49419 539 aaKnown RBP11.38□□□□□ -0.59
DDB1-221ENST00000543162 RAD23BP54727 409 aa11.38□□□□□ -0.59
DDB1-221ENST00000543162 BCAR1P56945 870 aa11.38□□□□□ -0.59
DDB1-221ENST00000543162 CDR2Q01850 454 aa11.38□□□□□ -0.59
DDB1-221ENST00000543162 SPA17Q15506 151 aa11.38□□□□□ -0.59
DDB1-221ENST00000543162 TAF3Q5VWG9 929 aa11.38□□□□□ -0.59
DDB1-221ENST00000543162 WSCD1Q658N2 575 aa11.38□□□□□ -0.59
DDB1-221ENST00000543162 UNC93AQ86WB7 457 aa11.38□□□□□ -0.59
DDB1-221ENST00000543162 METTL23Q86XA0 190 aa11.38□□□□□ -0.59
DDB1-221ENST00000543162 ZNF677Q86XU0 584 aa11.38□□□□□ -0.59
DDB1-221ENST00000543162 TMEM86AQ8N2M4 240 aa11.38□□□□□ -0.59
DDB1-221ENST00000543162 PHOSPHO2Q8TCD6 241 aa11.38□□□□□ -0.59
DDB1-221ENST00000543162 WHAMMQ8TF30 809 aa11.38□□□□□ -0.59
DDB1-221ENST00000543162 SLC20A1Q8WUM9 679 aa11.38□□□□□ -0.59
DDB1-221ENST00000543162 KBTBD7Q8WVZ9 684 aa11.38□□□□□ -0.59
DDB1-221ENST00000543162 TMEM176AQ96HP8 235 aa11.38□□□□□ -0.59
DDB1-221ENST00000543162 SUSD3Q96L08 255 aa11.38□□□□□ -0.59
DDB1-221ENST00000543162 SLC9A7Q96T83 725 aa11.38□□□□□ -0.59
DDB1-221ENST00000543162 ELOVL4Q9GZR5 314 aa11.38□□□□□ -0.59
DDB1-221ENST00000543162 CWH43Q9H720 699 aa11.38□□□□□ -0.59
DDB1-221ENST00000543162 RC3H2Q9HBD1 1191 aaKnown RBP11.38□□□□□ -0.59
DDB1-221ENST00000543162 SPTLC3Q9NUV7 552 aa11.38□□□□□ -0.59
DDB1-221ENST00000543162 SEPT11Q9NVA2 429 aaKnown RBP11.38□□□□□ -0.59
DDB1-221ENST00000543162 HMGXB4Q9UGU5 601 aa11.38□□□□□ -0.59
DDB1-221ENST00000543162 ADAMTS1Q9UHI8 967 aa11.38□□□□□ -0.59
DDB1-221ENST00000543162 DSEQ9UL01 958 aa11.38□□□□□ -0.59
DDB1-221ENST00000543162 COL4A6Q14031 1691 aa11.37□□□□□ -0.59
DDB1-221ENST00000543162 A0A087X0T9 212 aa11.37□□□□□ -0.59
DDB1-221ENST00000543162 A8MXQ7 604 aa11.37□□□□□ -0.59
DDB1-221ENST00000543162 EIF3CLB5ME19 914 aaKnown RBP11.37□□□□□ -0.59
DDB1-221ENST00000543162 M0QZQ0 153 aa11.37□□□□□ -0.59
DDB1-221ENST00000543162 GJB5O95377 273 aa11.37□□□□□ -0.59
DDB1-221ENST00000543162 FAM228BP0C875 321 aa11.37□□□□□ -0.59
DDB1-221ENST00000543162 CD19P15391 556 aa11.37□□□□□ -0.59
DDB1-221ENST00000543162 ATP2A2P16615 1042 aaKnown RBP11.37□□□□□ -0.59
DDB1-221ENST00000543162 BRD2P25440 801 aaKnown RBP11.37□□□□□ -0.59
DDB1-221ENST00000543162 MAGEA10P43363 369 aaPredicted RBP11.37□□□□□ -0.59
DDB1-221ENST00000543162 LHX1P48742 406 aa11.37□□□□□ -0.59
DDB1-221ENST00000543162 GFPT1Q06210 699 aaPredicted RBP11.37□□□□□ -0.59
DDB1-221ENST00000543162 ORC1Q13415 861 aa11.37□□□□□ -0.59
DDB1-221ENST00000543162 BMS1Q14692 1282 aaKnown RBP11.37□□□□□ -0.59
DDB1-221ENST00000543162 SLC18A3Q16572 532 aa11.37□□□□□ -0.59
DDB1-221ENST00000543162 ASTE1Q2TB18 679 aaPredicted RBP11.37□□□□□ -0.59
DDB1-221ENST00000543162 TOGARAM2Q6ZUX3 1019 aa11.37□□□□□ -0.59
DDB1-221ENST00000543162 GLYCTKQ8IVS8 523 aa11.37□□□□□ -0.59
DDB1-221ENST00000543162 HERC6Q8IVU3 1022 aa11.37□□□□□ -0.59
DDB1-221ENST00000543162 SLC4A11Q8NBS3 891 aa11.37□□□□□ -0.59
DDB1-221ENST00000543162 SPATA18Q8TC71 538 aa11.37□□□□□ -0.59
DDB1-221ENST00000543162 TNIP3Q96KP6 325 aa11.37□□□□□ -0.59
DDB1-221ENST00000543162 HEXIM2Q96MH2 286 aaKnown RBP11.37□□□□□ -0.59
DDB1-221ENST00000543162 ZNF558Q96NG5 402 aa11.37□□□□□ -0.59
DDB1-221ENST00000543162 TWNKQ96RR1 684 aa11.37□□□□□ -0.59
DDB1-221ENST00000543162 EIF3CQ99613 913 aaKnown RBP11.37□□□□□ -0.59
DDB1-221ENST00000543162 DESI2Q9BSY9 194 aa11.37□□□□□ -0.59
DDB1-221ENST00000543162 SYT11Q9BT88 431 aa11.37□□□□□ -0.59
DDB1-221ENST00000543162 PDCL3Q9H2J4 239 aa11.37□□□□□ -0.59
DDB1-221ENST00000543162 ADAM28Q9UKQ2 775 aa11.37□□□□□ -0.59
DDB1-221ENST00000543162 KIAA1257Q9ULG3 409 aa11.37□□□□□ -0.59
DDB1-221ENST00000543162 PCDHB8Q9UN66 801 aa11.37□□□□□ -0.59
DDB1-221ENST00000543162 STXBP5LQ9Y2K9 1186 aa11.37□□□□□ -0.59
DDB1-221ENST00000543162 INSL6Q9Y581 213 aa11.37□□□□□ -0.59
DDB1-221ENST00000543162 TIMM13Q9Y5L4 95 aaPredicted RBP11.37□□□□□ -0.59
DDB1-221ENST00000543162 MRPL42Q9Y6G3 142 aaKnown RBP11.37□□□□□ -0.59
DDB1-221ENST00000543162 MKI67P46013 3256 aaKnown RBP11.37□□□□□ -0.59
DDB1-221ENST00000543162 PTPRSQ13332 1948 aa11.37□□□□□ -0.59
DDB1-221ENST00000543162 SF3B1O75533 1304 aaKnown RBP eCLIP11.36□□□□□ -0.595e-6■■■■■ 72.7
DDB1-221ENST00000543162 CARNS1A5YM72 827 aa11.36□□□□□ -0.59
DDB1-221ENST00000543162 NT5C1B-RDH14C9J2C7 533 aa11.36□□□□□ -0.59
DDB1-221ENST00000543162 DDX3XO00571 662 aaKnown RBP eCLIP11.36□□□□□ -0.592e-22■■■■□ 23.7
DDB1-221ENST00000543162 GABRDO14764 452 aa11.36□□□□□ -0.59
DDB1-221ENST00000543162 MED7O43513 233 aa11.36□□□□□ -0.59
DDB1-221ENST00000543162 CYP11A1P05108 521 aa11.36□□□□□ -0.59
DDB1-221ENST00000543162 MMEP08473 750 aa11.36□□□□□ -0.59
DDB1-221ENST00000543162 PDGFRBP09619 1106 aa11.36□□□□□ -0.59
DDB1-221ENST00000543162 CCDC175P0C221 793 aa11.36□□□□□ -0.59
DDB1-221ENST00000543162 VDRP11473 427 aa11.36□□□□□ -0.59
DDB1-221ENST00000543162 CHRNB2P17787 502 aa11.36□□□□□ -0.59
DDB1-221ENST00000543162 LAG3P18627 525 aa11.36□□□□□ -0.59
DDB1-221ENST00000543162 TYMPP19971 482 aa11.36□□□□□ -0.59
DDB1-221ENST00000543162 LMO2P25791 158 aa11.36□□□□□ -0.59
DDB1-221ENST00000543162 PBX3P40426 434 aa11.36□□□□□ -0.59
DDB1-221ENST00000543162 KRT83P78385 493 aa11.36□□□□□ -0.59
DDB1-221ENST00000543162 HTRA4P83105 476 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms