RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 SPOPLQ6IQ16 392 aa18.34■□□□□ 0.53
RABGGTA-203ENST00000543002 LILRA6Q6PI73 481 aa18.34■□□□□ 0.53
RABGGTA-203ENST00000543002 PALB2Q86YC2 1186 aa18.34■□□□□ 0.53
RABGGTA-203ENST00000543002 AOPEPQ8N6M6 819 aa18.34■□□□□ 0.53
RABGGTA-203ENST00000543002 CCDC150Q8NCX0 1101 aa18.34■□□□□ 0.53
RABGGTA-203ENST00000543002 ELMO3Q96BJ8 720 aa18.34■□□□□ 0.53
RABGGTA-203ENST00000543002 RTP3Q9BQQ7 232 aa18.34■□□□□ 0.53
RABGGTA-203ENST00000543002 CLDND1Q9NY35 253 aa18.34■□□□□ 0.53
RABGGTA-203ENST00000543002 POLIQ9UNA4 740 aa18.34■□□□□ 0.53
RABGGTA-203ENST00000543002 TSC2P49815 1807 aa18.34■□□□□ 0.53
RABGGTA-203ENST00000543002 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.33■□□□□ 0.53
RABGGTA-203ENST00000543002 TGM5O43548 720 aa18.33■□□□□ 0.53
RABGGTA-203ENST00000543002 LRRN2O75325 713 aa18.33■□□□□ 0.53
RABGGTA-203ENST00000543002 EPCAMP16422 314 aa18.33■□□□□ 0.53
RABGGTA-203ENST00000543002 WARSP23381 471 aaKnown RBP18.33■□□□□ 0.53
RABGGTA-203ENST00000543002 LHX1P48742 406 aa18.33■□□□□ 0.53
RABGGTA-203ENST00000543002 NOP14P78316 857 aaKnown RBP18.33■□□□□ 0.53
RABGGTA-203ENST00000543002 ROR1Q01973 937 aa18.33■□□□□ 0.53
RABGGTA-203ENST00000543002 CETN1Q12798 172 aa18.33■□□□□ 0.53
RABGGTA-203ENST00000543002 MAN2A1Q16706 1144 aa18.33■□□□□ 0.53
RABGGTA-203ENST00000543002 TCP11X2Q5H9J9 407 aa18.33■□□□□ 0.53
RABGGTA-203ENST00000543002 LLGL2Q6P1M3 1020 aa18.33■□□□□ 0.53
RABGGTA-203ENST00000543002 OSTM1Q86WC4 334 aa18.33■□□□□ 0.53
RABGGTA-203ENST00000543002 KBTBD7Q8WVZ9 684 aa18.33■□□□□ 0.53
RABGGTA-203ENST00000543002 CASP10Q92851 521 aa18.33■□□□□ 0.53
RABGGTA-203ENST00000543002 FAXDC2Q96IV6 333 aa18.33■□□□□ 0.53
RABGGTA-203ENST00000543002 TUBGCP2Q9BSJ2 902 aa18.33■□□□□ 0.53
RABGGTA-203ENST00000543002 APOBEC3GQ9HC16 384 aaKnown RBP18.33■□□□□ 0.53
RABGGTA-203ENST00000543002 DDX43Q9NXZ2 648 aaKnown RBP18.33■□□□□ 0.53
RABGGTA-203ENST00000543002 REV3LO60673 3130 aa18.33■□□□□ 0.52
RABGGTA-203ENST00000543002 SMTNL1A8MU46 457 aa18.32■□□□□ 0.52
RABGGTA-203ENST00000543002 CAVIN2O95810 425 aa18.32■□□□□ 0.52
RABGGTA-203ENST00000543002 SRGAP2BP0DMP2 458 aa18.32■□□□□ 0.52
RABGGTA-203ENST00000543002 LTBRP36941 435 aa18.32■□□□□ 0.52
RABGGTA-203ENST00000543002 ARPP19P56211 112 aa18.32■□□□□ 0.52
RABGGTA-203ENST00000543002 WDR44Q5JSH3 913 aa18.32■□□□□ 0.52
RABGGTA-203ENST00000543002 TPGS2Q68CL5 300 aa18.32■□□□□ 0.52
RABGGTA-203ENST00000543002 DHX40Q8IX18 779 aaKnown RBP18.32■□□□□ 0.52
RABGGTA-203ENST00000543002 OR10T2Q8NGX3 314 aa18.32■□□□□ 0.52
RABGGTA-203ENST00000543002 ZNF461Q8TAF7 563 aa18.32■□□□□ 0.52
RABGGTA-203ENST00000543002 HDAC7Q8WUI4 952 aa18.32■□□□□ 0.52
RABGGTA-203ENST00000543002 HLA-CQ95604 372 aa18.32■□□□□ 0.52
RABGGTA-203ENST00000543002 MRPL45Q9BRJ2 306 aaKnown RBP18.32■□□□□ 0.52
RABGGTA-203ENST00000543002 NIF3L1Q9GZT8 377 aa18.32■□□□□ 0.52
RABGGTA-203ENST00000543002 SMYD3Q9H7B4 428 aa18.32■□□□□ 0.52
RABGGTA-203ENST00000543002 UBE2ZQ9H832 354 aaPredicted RBP18.32■□□□□ 0.52
RABGGTA-203ENST00000543002 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.32■□□□□ 0.52
RABGGTA-203ENST00000543002 COG5Q9UP83 839 aa18.32■□□□□ 0.52
RABGGTA-203ENST00000543002 WDR27A2RRH5 827 aa18.31■□□□□ 0.52
RABGGTA-203ENST00000543002 TBX10O75333 385 aa18.31■□□□□ 0.52
RABGGTA-203ENST00000543002 ABLIM3O94929 683 aa18.31■□□□□ 0.52
RABGGTA-203ENST00000543002 PRKCSHP14314 528 aaPredicted RBP18.31■□□□□ 0.52
RABGGTA-203ENST00000543002 CPB1P15086 417 aa18.31■□□□□ 0.52
RABGGTA-203ENST00000543002 ZNF18P17022 549 aa18.31■□□□□ 0.52
RABGGTA-203ENST00000543002 ASPAP45381 313 aa18.31■□□□□ 0.52
RABGGTA-203ENST00000543002 DLX2Q07687 328 aaPredicted RBP18.31■□□□□ 0.52
RABGGTA-203ENST00000543002 IQCB1Q15051 598 aa18.31■□□□□ 0.52
RABGGTA-203ENST00000543002 VWA3BQ502W6 1294 aa18.31■□□□□ 0.52
RABGGTA-203ENST00000543002 SCARA5Q6ZMJ2 495 aa18.31■□□□□ 0.52
RABGGTA-203ENST00000543002 EP400NLQ6ZTU2 488 aa18.31■□□□□ 0.52
RABGGTA-203ENST00000543002 LMO3Q8TAP4 145 aa18.31■□□□□ 0.52
RABGGTA-203ENST00000543002 TMEM209Q96SK2 561 aa18.31■□□□□ 0.52
RABGGTA-203ENST00000543002 ACBD6Q9BR61 282 aa18.31■□□□□ 0.52
RABGGTA-203ENST00000543002 BCO2Q9BYV7 579 aa18.31■□□□□ 0.52
RABGGTA-203ENST00000543002 ZCWPW1Q9H0M4 648 aa18.31■□□□□ 0.52
RABGGTA-203ENST00000543002 SDCBP2Q9H190 292 aa18.31■□□□□ 0.52
RABGGTA-203ENST00000543002 HSD3B7Q9H2F3 369 aa18.31■□□□□ 0.52
RABGGTA-203ENST00000543002 SNX25Q9H3E2 840 aa18.31■□□□□ 0.52
RABGGTA-203ENST00000543002 PLEKHA4Q9H4M7 779 aa18.31■□□□□ 0.52
RABGGTA-203ENST00000543002 CLEC1BQ9P126 229 aa18.31■□□□□ 0.52
RABGGTA-203ENST00000543002 DPP7Q9UHL4 492 aa18.31■□□□□ 0.52
RABGGTA-203ENST00000543002 FBXW11Q9UKB1 542 aa18.31■□□□□ 0.52
RABGGTA-203ENST00000543002 BARX2Q9UMQ3 279 aaPredicted RBP18.31■□□□□ 0.52
RABGGTA-203ENST00000543002 OR4Q2P0C623 313 aa18.3■□□□□ 0.52
RABGGTA-203ENST00000543002 SPATA31D3P0C874 917 aa18.3■□□□□ 0.52
RABGGTA-203ENST00000543002 PCSK1P29120 753 aa18.3■□□□□ 0.52
RABGGTA-203ENST00000543002 GNL1P36915 607 aaPredicted RBP18.3■□□□□ 0.52
RABGGTA-203ENST00000543002 CDH8P55286 799 aa18.3■□□□□ 0.52
RABGGTA-203ENST00000543002 GPR17Q13304 367 aa18.3■□□□□ 0.52
RABGGTA-203ENST00000543002 MIIPQ5JXC2 388 aa18.3■□□□□ 0.52
RABGGTA-203ENST00000543002 ANKRD54Q6NXT1 300 aa18.3■□□□□ 0.52
RABGGTA-203ENST00000543002 ELMSAN1Q6PJG2 1045 aa18.3■□□□□ 0.52
RABGGTA-203ENST00000543002 SPATA31D4Q6ZUB0 917 aa18.3■□□□□ 0.52
RABGGTA-203ENST00000543002 KREMEN2Q8NCW0 462 aa18.3■□□□□ 0.52
RABGGTA-203ENST00000543002 EHBP1Q8NDI1 1231 aa18.3■□□□□ 0.52
RABGGTA-203ENST00000543002 OR6B3Q8NGW1 331 aa18.3■□□□□ 0.52
RABGGTA-203ENST00000543002 NDST4Q9H3R1 872 aa18.3■□□□□ 0.52
RABGGTA-203ENST00000543002 CYP3A43Q9HB55 503 aa18.3■□□□□ 0.52
RABGGTA-203ENST00000543002 MAN1C1Q9NR34 630 aa18.3■□□□□ 0.52
RABGGTA-203ENST00000543002 DZANK1Q9NVP4 752 aa18.3■□□□□ 0.52
RABGGTA-203ENST00000543002 AFF4Q9UHB7 1163 aaKnown RBP18.3■□□□□ 0.52
RABGGTA-203ENST00000543002 PLXNA3P51805 1871 aa18.3■□□□□ 0.52
RABGGTA-203ENST00000543002 BRWD1Q9NSI6 2320 aa18.3■□□□□ 0.52
RABGGTA-203ENST00000543002 GTPBP10A4D1E9 387 aaKnown RBP18.29■□□□□ 0.52
RABGGTA-203ENST00000543002 BECN2A8MW95 431 aa18.29■□□□□ 0.52
RABGGTA-203ENST00000543002 ATF2P15336 505 aa18.29■□□□□ 0.52
RABGGTA-203ENST00000543002 HOXB8P17481 243 aaPredicted RBP18.29■□□□□ 0.52
RABGGTA-203ENST00000543002 LMO2P25791 158 aa18.29■□□□□ 0.52
RABGGTA-203ENST00000543002 RAP1GAPP47736 663 aa18.29■□□□□ 0.52
RABGGTA-203ENST00000543002 TSPY1Q01534 308 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms