RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 SLITRK6Q9H5Y7 841 aa21.5■■□□□ 1.03
DDX11-220ENST00000542244 IL21Q9HBE4 155 aa21.5■■□□□ 1.03
DDX11-220ENST00000542244 DERAQ9Y315 318 aa21.5■■□□□ 1.03
DDX11-220ENST00000542244 PIAS3Q9Y6X2 628 aa21.5■■□□□ 1.03
DDX11-220ENST00000542244 GOLGA8IPA6NC78 632 aa21.49■■□□□ 1.03
DDX11-220ENST00000542244 GOLGA8JA6NMD2 632 aa21.49■■□□□ 1.03
DDX11-220ENST00000542244 TULP1O00294 542 aaPredicted RBP21.49■■□□□ 1.03
DDX11-220ENST00000542244 ARID3BQ8IVW6 561 aaPredicted RBP21.49■■□□□ 1.03
DDX11-220ENST00000542244 HPS3Q969F9 1004 aa21.49■■□□□ 1.03
DDX11-220ENST00000542244 PSMG2Q969U7 264 aa21.49■■□□□ 1.03
DDX11-220ENST00000542244 TSPAN18Q96SJ8 248 aa21.49■■□□□ 1.03
DDX11-220ENST00000542244 SEPT5Q99719 369 aaPredicted RBP21.49■■□□□ 1.03
DDX11-220ENST00000542244 FAM213AQ9BRX8 229 aa21.49■■□□□ 1.03
DDX11-220ENST00000542244 ASB7Q9H672 318 aa21.49■■□□□ 1.03
DDX11-220ENST00000542244 MRPL44Q9H9J2 332 aaKnown RBP21.49■■□□□ 1.03
DDX11-220ENST00000542244 STK17AQ9UEE5 414 aa21.49■■□□□ 1.03
DDX11-220ENST00000542244 C2CD2Q9Y426 696 aa21.49■■□□□ 1.03
DDX11-220ENST00000542244 FRYLO94915 3013 aa21.48■■□□□ 1.03
DDX11-220ENST00000542244 OTOGLQ3ZCN5 2332 aa21.48■■□□□ 1.03
DDX11-220ENST00000542244 HCRTO43612 131 aa21.48■■□□□ 1.03
DDX11-220ENST00000542244 PRAMEF12O95522 483 aa21.48■■□□□ 1.03
DDX11-220ENST00000542244 TDGF1P13385 188 aa21.48■■□□□ 1.03
DDX11-220ENST00000542244 SCP2P22307 547 aa21.48■■□□□ 1.03
DDX11-220ENST00000542244 CCNE1P24864 410 aa21.48■■□□□ 1.03
DDX11-220ENST00000542244 GABRR2P28476 465 aa21.48■■□□□ 1.03
DDX11-220ENST00000542244 ALDH1A3P47895 512 aa21.48■■□□□ 1.03
DDX11-220ENST00000542244 GPR15P49685 360 aa21.48■■□□□ 1.03
DDX11-220ENST00000542244 SLFN12LQ6IEE8 588 aa21.48■■□□□ 1.03
DDX11-220ENST00000542244 LEMD2Q8NC56 503 aa21.48■■□□□ 1.03
DDX11-220ENST00000542244 CXorf38Q8TB03 319 aa21.48■■□□□ 1.03
DDX11-220ENST00000542244 FAM3CQ92520 227 aa21.48■■□□□ 1.03
DDX11-220ENST00000542244 NELL1Q92832 810 aa21.48■■□□□ 1.03
DDX11-220ENST00000542244 RMDN1Q96DB5 314 aa21.48■■□□□ 1.03
DDX11-220ENST00000542244 CBWD1Q9BRT8 395 aa21.48■■□□□ 1.03
DDX11-220ENST00000542244 OXCT2Q9BYC2 517 aaPredicted RBP21.48■■□□□ 1.03
DDX11-220ENST00000542244 ATXN3LQ9H3M9 355 aa21.48■■□□□ 1.03
DDX11-220ENST00000542244 SEMA4AQ9H3S1 761 aa21.48■■□□□ 1.03
DDX11-220ENST00000542244 LMAN1LQ9HAT1 526 aa21.48■■□□□ 1.03
DDX11-220ENST00000542244 RBM12Q9NTZ6 932 aaKnown RBP21.48■■□□□ 1.03
DDX11-220ENST00000542244 FBXO4Q9UKT5 387 aa21.48■■□□□ 1.03
DDX11-220ENST00000542244 SLC38A8A6NNN8 435 aa21.47■■□□□ 1.03
DDX11-220ENST00000542244 ZNF263O14978 683 aa21.47■■□□□ 1.03
DDX11-220ENST00000542244 RPS9P46781 194 aaKnown RBP21.47■■□□□ 1.03
DDX11-220ENST00000542244 ID4P47928 161 aa21.47■■□□□ 1.03
DDX11-220ENST00000542244 TAF6P49848 677 aa21.47■■□□□ 1.03
DDX11-220ENST00000542244 ZNF528Q3MIS6 628 aa21.47■■□□□ 1.03
DDX11-220ENST00000542244 L1TD1Q5T7N2 865 aaKnown RBP21.47■■□□□ 1.03
DDX11-220ENST00000542244 GPR158Q5T848 1215 aa21.47■■□□□ 1.03
DDX11-220ENST00000542244 ARMCX5Q6P1M9 558 aa21.47■■□□□ 1.03
DDX11-220ENST00000542244 TXNDC11Q6PKC3 985 aa21.47■■□□□ 1.03
DDX11-220ENST00000542244 SV2BQ7L1I2 683 aa21.47■■□□□ 1.03
DDX11-220ENST00000542244 ZBTB44Q8NCP5 570 aa21.47■■□□□ 1.03
DDX11-220ENST00000542244 IRF7Q92985 503 aa21.47■■□□□ 1.03
DDX11-220ENST00000542244 NELL2Q99435 816 aa21.47■■□□□ 1.03
DDX11-220ENST00000542244 PCIF1Q9H4Z3 704 aa21.47■■□□□ 1.03
DDX11-220ENST00000542244 PRMT8Q9NR22 394 aaPredicted RBP21.47■■□□□ 1.03
DDX11-220ENST00000542244 C2orf42Q9NWW7 574 aa21.47■■□□□ 1.03
DDX11-220ENST00000542244 CCDC39Q9UFE4 941 aa21.47■■□□□ 1.03
DDX11-220ENST00000542244 F5P12259 2224 aa21.47■■□□□ 1.03
DDX11-220ENST00000542244 DMXL1Q9Y485 3027 aa21.46■■□□□ 1.03
DDX11-220ENST00000542244 PRPF6O94906 941 aaKnown RBP21.46■■□□□ 1.03
DDX11-220ENST00000542244 GCNT3O95395 438 aa21.46■■□□□ 1.03
DDX11-220ENST00000542244 CHRNB1P11230 501 aa21.46■■□□□ 1.03
DDX11-220ENST00000542244 IDEP14735 1019 aa21.46■■□□□ 1.03
DDX11-220ENST00000542244 PLD1Q13393 1074 aa21.46■■□□□ 1.03
DDX11-220ENST00000542244 SLC39A14Q15043 492 aa21.46■■□□□ 1.03
DDX11-220ENST00000542244 MGAT5BQ3V5L5 792 aa21.46■■□□□ 1.03
DDX11-220ENST00000542244 SDHAF4Q5VUM1 108 aa21.46■■□□□ 1.03
DDX11-220ENST00000542244 TMEM150AQ86TG1 271 aa21.46■■□□□ 1.03
DDX11-220ENST00000542244 PDILTQ8N807 584 aa21.46■■□□□ 1.03
DDX11-220ENST00000542244 C1orf127Q8N9H9 656 aa21.46■■□□□ 1.03
DDX11-220ENST00000542244 DEPDC1BQ8WUY9 529 aa21.46■■□□□ 1.03
DDX11-220ENST00000542244 CHRDQ9H2X0 955 aa21.46■■□□□ 1.03
DDX11-220ENST00000542244 TRPV5Q9NQA5 729 aa21.46■■□□□ 1.03
DDX11-220ENST00000542244 FRMD3A2A2Y4 597 aa21.45■■□□□ 1.02
DDX11-220ENST00000542244 KPNA7A9QM74 516 aa21.45■■□□□ 1.02
DDX11-220ENST00000542244 LILRB5O75023 590 aa21.45■■□□□ 1.02
DDX11-220ENST00000542244 HAPLN1P10915 354 aaPredicted RBP21.45■■□□□ 1.02
DDX11-220ENST00000542244 PDCP20941 246 aa21.45■■□□□ 1.02
DDX11-220ENST00000542244 POLR2BP30876 1174 aaKnown RBP21.45■■□□□ 1.02
DDX11-220ENST00000542244 TFAMQ00059 246 aaKnown RBP21.45■■□□□ 1.02
DDX11-220ENST00000542244 TNK2Q07912 1038 aa21.45■■□□□ 1.02
DDX11-220ENST00000542244 DMWDQ09019 674 aa21.45■■□□□ 1.02
DDX11-220ENST00000542244 FCHO2Q0JRZ9 810 aa21.45■■□□□ 1.02
DDX11-220ENST00000542244 LMBRD2Q68DH5 695 aaPredicted RBP21.45■■□□□ 1.02
DDX11-220ENST00000542244 ZC3H14Q6PJT7 736 aaKnown RBP21.45■■□□□ 1.02
DDX11-220ENST00000542244 OSTM1Q86WC4 334 aa21.45■■□□□ 1.02
DDX11-220ENST00000542244 RIN3Q8TB24 985 aa21.45■■□□□ 1.02
DDX11-220ENST00000542244 HVCN1Q96D96 273 aa21.45■■□□□ 1.02
DDX11-220ENST00000542244 ACCSQ96QU6 501 aa21.45■■□□□ 1.02
DDX11-220ENST00000542244 SLC46A2Q9BY10 475 aa21.45■■□□□ 1.02
DDX11-220ENST00000542244 ABI2Q9NYB9 513 aaPredicted RBP21.45■■□□□ 1.02
DDX11-220ENST00000542244 GTSE1Q9NYZ3 720 aa21.45■■□□□ 1.02
DDX11-220ENST00000542244 L1RE1Q9UN81 338 aa21.45■■□□□ 1.02
DDX11-220ENST00000542244 AGAP1Q9UPQ3 857 aa21.45■■□□□ 1.02
DDX11-220ENST00000542244 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.45■■□□□ 1.02
DDX11-220ENST00000542244 PTPRJQ12913 1337 aa21.45■■□□□ 1.02
DDX11-220ENST00000542244 KINO60870 393 aaKnown RBP21.44■■□□□ 1.02
DDX11-220ENST00000542244 ITGB3P05106 788 aa21.44■■□□□ 1.02
DDX11-220ENST00000542244 ACAT1P24752 427 aaKnown RBP21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms