RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 PAX3P23760 479 aa10.47□□□□□ -0.73
YBX3-212ENST00000542002 LMO2P25791 158 aa10.47□□□□□ -0.73
YBX3-212ENST00000542002 PNPLA4P41247 253 aa10.47□□□□□ -0.73
YBX3-212ENST00000542002 MYL6P60660 151 aa10.47□□□□□ -0.73
YBX3-212ENST00000542002 DUSP4Q13115 394 aa10.47□□□□□ -0.73
YBX3-212ENST00000542002 GPR17Q13304 367 aa10.47□□□□□ -0.73
YBX3-212ENST00000542002 MORC3Q14149 939 aa10.47□□□□□ -0.73
YBX3-212ENST00000542002 CCDC142Q17RM4 750 aa10.47□□□□□ -0.73
YBX3-212ENST00000542002 TPGS2Q68CL5 300 aa10.47□□□□□ -0.73
YBX3-212ENST00000542002 CYP26C1Q6V0L0 522 aa10.47□□□□□ -0.73
YBX3-212ENST00000542002 KBTBD7Q8WVZ9 684 aa10.47□□□□□ -0.73
YBX3-212ENST00000542002 MYADMQ96S97 322 aa10.47□□□□□ -0.73
YBX3-212ENST00000542002 ZCWPW1Q9H0M4 648 aa10.47□□□□□ -0.73
YBX3-212ENST00000542002 C11orf16Q9NQ32 467 aa10.47□□□□□ -0.73
YBX3-212ENST00000542002 RMND1Q9NWS8 449 aa10.47□□□□□ -0.73
YBX3-212ENST00000542002 CEP72Q9P209 647 aa10.47□□□□□ -0.73
YBX3-212ENST00000542002 LIMD1Q9UGP4 676 aa10.47□□□□□ -0.73
YBX3-212ENST00000542002 AFF4Q9UHB7 1163 aaKnown RBP10.47□□□□□ -0.73
YBX3-212ENST00000542002 DPP7Q9UHL4 492 aa10.47□□□□□ -0.73
YBX3-212ENST00000542002 MUTYHQ9UIF7 546 aa10.47□□□□□ -0.73
YBX3-212ENST00000542002 MTMR11A4FU01 709 aa10.46□□□□□ -0.73
YBX3-212ENST00000542002 MAPK13O15264 365 aa10.46□□□□□ -0.73
YBX3-212ENST00000542002 ATP2C2O75185 946 aa10.46□□□□□ -0.73
YBX3-212ENST00000542002 KIF20AO95235 890 aa10.46□□□□□ -0.73
YBX3-212ENST00000542002 ASGR2P07307 311 aa10.46□□□□□ -0.73
YBX3-212ENST00000542002 TRIM49P0CI25 452 aa10.46□□□□□ -0.73
YBX3-212ENST00000542002 TRIM49CP0CI26 452 aa10.46□□□□□ -0.73
YBX3-212ENST00000542002 CPB1P15086 417 aa10.46□□□□□ -0.73
YBX3-212ENST00000542002 ACAT1P24752 427 aaKnown RBP10.46□□□□□ -0.73
YBX3-212ENST00000542002 HOXA9P31269 272 aa10.46□□□□□ -0.73
YBX3-212ENST00000542002 PPP3CAQ08209 521 aa10.46□□□□□ -0.73
YBX3-212ENST00000542002 SLC5A9Q2M3M2 681 aa10.46□□□□□ -0.73
YBX3-212ENST00000542002 EDRF1Q3B7T1 1238 aa10.46□□□□□ -0.73
YBX3-212ENST00000542002 SLC39A12Q504Y0 691 aa10.46□□□□□ -0.73
YBX3-212ENST00000542002 LIN9Q5TKA1 542 aa10.46□□□□□ -0.73
YBX3-212ENST00000542002 SV2AQ7L0J3 742 aa10.46□□□□□ -0.73
YBX3-212ENST00000542002 ZC3H3Q8IXZ2 948 aaKnown RBP10.46□□□□□ -0.73
YBX3-212ENST00000542002 HS6ST3Q8IZP7 471 aa10.46□□□□□ -0.73
YBX3-212ENST00000542002 ITFG1Q8TB96 612 aa10.46□□□□□ -0.73
YBX3-212ENST00000542002 TMC2Q8TDI7 906 aa10.46□□□□□ -0.73
YBX3-212ENST00000542002 CCDC34Q96HJ3 373 aa10.46□□□□□ -0.73
YBX3-212ENST00000542002 ZNF560Q96MR9 790 aa10.46□□□□□ -0.73
YBX3-212ENST00000542002 MED15Q96RN5 788 aa10.46□□□□□ -0.73
YBX3-212ENST00000542002 PKMYT1Q99640 499 aa10.46□□□□□ -0.73
YBX3-212ENST00000542002 DUSP9Q99956 384 aaKnown RBP10.46□□□□□ -0.73
YBX3-212ENST00000542002 LPIN3Q9BQK8 851 aa10.46□□□□□ -0.73
YBX3-212ENST00000542002 OXCT2Q9BYC2 517 aaPredicted RBP10.46□□□□□ -0.73
YBX3-212ENST00000542002 SMOC2Q9H3U7 446 aa10.46□□□□□ -0.73
YBX3-212ENST00000542002 PIDD1Q9HB75 910 aa10.46□□□□□ -0.73
YBX3-212ENST00000542002 DSEQ9UL01 958 aa10.46□□□□□ -0.73
YBX3-212ENST00000542002 POLIQ9UNA4 740 aa10.46□□□□□ -0.73
YBX3-212ENST00000542002 USTQ9Y2C2 406 aa10.46□□□□□ -0.73
YBX3-212ENST00000542002 FRMD4BQ9Y2L6 1034 aa10.46□□□□□ -0.73
YBX3-212ENST00000542002 INSL5Q9Y5Q6 135 aa10.46□□□□□ -0.73
YBX3-212ENST00000542002 SCN1AP35498 2009 aa10.46□□□□□ -0.74
YBX3-212ENST00000542002 CLUHO75153 1309 aa10.45□□□□□ -0.74
YBX3-212ENST00000542002 MYBPHLA2RUH7 354 aa10.45□□□□□ -0.74
YBX3-212ENST00000542002 PRRG1O14668 218 aa10.45□□□□□ -0.74
YBX3-212ENST00000542002 IKBKBO14920 756 aa10.45□□□□□ -0.74
YBX3-212ENST00000542002 HUS1O60921 280 aa10.45□□□□□ -0.74
YBX3-212ENST00000542002 POU2F2P09086 479 aa10.45□□□□□ -0.74
YBX3-212ENST00000542002 ELF1P32519 619 aa10.45□□□□□ -0.74
YBX3-212ENST00000542002 PSMC2P35998 433 aaKnown RBP10.45□□□□□ -0.74
YBX3-212ENST00000542002 CCR2P41597 374 aa10.45□□□□□ -0.74
YBX3-212ENST00000542002 GCLMP48507 274 aa10.45□□□□□ -0.74
YBX3-212ENST00000542002 CLCN6P51797 869 aa10.45□□□□□ -0.74
YBX3-212ENST00000542002 VAMP7P51809 220 aa10.45□□□□□ -0.74
YBX3-212ENST00000542002 TWF1Q12792 350 aa10.45□□□□□ -0.74
YBX3-212ENST00000542002 MYO1EQ12965 1108 aa10.45□□□□□ -0.74
YBX3-212ENST00000542002 WDR72Q3MJ13 1102 aa10.45□□□□□ -0.74
YBX3-212ENST00000542002 ZACNQ401N2 412 aa10.45□□□□□ -0.74
YBX3-212ENST00000542002 CCDC149Q6ZUS6 474 aa10.45□□□□□ -0.74
YBX3-212ENST00000542002 RTL10Q7L3V2 364 aa10.45□□□□□ -0.74
YBX3-212ENST00000542002 METTL23Q86XA0 190 aa10.45□□□□□ -0.74
YBX3-212ENST00000542002 FAM186BQ8IYM0 893 aa10.45□□□□□ -0.74
YBX3-212ENST00000542002 ZDHHC14Q8IZN3 488 aa10.45□□□□□ -0.74
YBX3-212ENST00000542002 THEM5Q8N1Q8 247 aa10.45□□□□□ -0.74
YBX3-212ENST00000542002 TOP6BLQ8N6T0 577 aa10.45□□□□□ -0.74
YBX3-212ENST00000542002 RSAD2Q8WXG1 361 aa10.45□□□□□ -0.74
YBX3-212ENST00000542002 TCEAL4Q96EI5 215 aa10.45□□□□□ -0.74
YBX3-212ENST00000542002 MRPL45Q9BRJ2 306 aaKnown RBP10.45□□□□□ -0.74
YBX3-212ENST00000542002 LRRC3Q9BY71 257 aa10.45□□□□□ -0.74
YBX3-212ENST00000542002 DNAJC25Q9H1X3 360 aa10.45□□□□□ -0.74
YBX3-212ENST00000542002 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.45□□□□□ -0.74
YBX3-212ENST00000542002 DDX43Q9NXZ2 648 aaKnown RBP10.45□□□□□ -0.74
YBX3-212ENST00000542002 KIAA1468Q9P260 1216 aa10.45□□□□□ -0.74
YBX3-212ENST00000542002 HOOK1Q9UJC3 728 aaKnown RBP10.45□□□□□ -0.74
YBX3-212ENST00000542002 NR2E1Q9Y466 385 aa10.45□□□□□ -0.74
YBX3-212ENST00000542002 TRIOO75962 3097 aa10.45□□□□□ -0.74
YBX3-212ENST00000542002 BDP1A6H8Y1 2624 aa10.45□□□□□ -0.74
YBX3-212ENST00000542002 MOSPD3O75425 235 aa10.44□□□□□ -0.74
YBX3-212ENST00000542002 STAU1O95793 577 aaKnown RBP10.44□□□□□ -0.74
YBX3-212ENST00000542002 RHOP08100 348 aa10.44□□□□□ -0.74
YBX3-212ENST00000542002 PDGFRBP09619 1106 aa10.44□□□□□ -0.74
YBX3-212ENST00000542002 LAMP2P13473 410 aa10.44□□□□□ -0.74
YBX3-212ENST00000542002 FSHRP23945 695 aa10.44□□□□□ -0.74
YBX3-212ENST00000542002 CCNE1P24864 410 aa10.44□□□□□ -0.74
YBX3-212ENST00000542002 RPL13P26373 211 aaKnown RBP10.44□□□□□ -0.74
YBX3-212ENST00000542002 GPR15P49685 360 aa10.44□□□□□ -0.74
YBX3-212ENST00000542002 CDH8P55286 799 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms