RNA–Protein interactions for RNA: ENST00000541916.5

FNDC3A-206, Transcript of fibronectin type III domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3A, Length 6,328 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-206ENST00000541916 PARVAQ9NVD7 372 aa9.11□□□□□ -0.95
FNDC3A-206ENST00000541916 UBA6A0AVT1 1052 aaPredicted RBP9.11□□□□□ -0.95
FNDC3A-206ENST00000541916 TJP3O95049 919 aa9.11□□□□□ -0.95
FNDC3A-206ENST00000541916 CTSEP14091 401 aa9.11□□□□□ -0.95
FNDC3A-206ENST00000541916 ACAT1P24752 427 aaKnown RBP9.11□□□□□ -0.95
FNDC3A-206ENST00000541916 MAP4P27816 1152 aaKnown RBP9.11□□□□□ -0.95
FNDC3A-206ENST00000541916 CDC25CP30307 473 aa9.11□□□□□ -0.95
FNDC3A-206ENST00000541916 TSHZ1Q6ZSZ6 1077 aa9.11□□□□□ -0.95
FNDC3A-206ENST00000541916 SYT2Q8N9I0 419 aaPredicted RBP9.11□□□□□ -0.95
FNDC3A-206ENST00000541916 USP33Q8TEY7 942 aa9.11□□□□□ -0.95
FNDC3A-206ENST00000541916 EXT2Q93063 718 aa9.11□□□□□ -0.95
FNDC3A-206ENST00000541916 RBM41Q96IZ5 413 aaKnown RBP9.11□□□□□ -0.95
FNDC3A-206ENST00000541916 DESI2Q9BSY9 194 aa9.11□□□□□ -0.95
FNDC3A-206ENST00000541916 KLC2Q9H0B6 622 aa9.11□□□□□ -0.95
FNDC3A-206ENST00000541916 WDCPQ9H6R7 721 aa9.11□□□□□ -0.95
FNDC3A-206ENST00000541916 WDR35Q9P2L0 1181 aa9.11□□□□□ -0.95
FNDC3A-206ENST00000541916 DDX41Q9UJV9 622 aaKnown RBP9.11□□□□□ -0.95
FNDC3A-206ENST00000541916 PADI3Q9ULW8 664 aa9.11□□□□□ -0.95
FNDC3A-206ENST00000541916 ARHGAP42A6NI28 874 aa9.1□□□□□ -0.95
FNDC3A-206ENST00000541916 TREHO43280 583 aa9.1□□□□□ -0.95
FNDC3A-206ENST00000541916 ENDOD1O94919 500 aa9.1□□□□□ -0.95
FNDC3A-206ENST00000541916 HHATQ5VTY9 493 aa9.1□□□□□ -0.95
FNDC3A-206ENST00000541916 DBF4BQ8NFT6 615 aa9.1□□□□□ -0.95
FNDC3A-206ENST00000541916 FAF2Q96CS3 445 aa9.1□□□□□ -0.95
FNDC3A-206ENST00000541916 GPR20Q99678 358 aa9.1□□□□□ -0.95
FNDC3A-206ENST00000541916 CCSER1Q9C0I3 900 aa9.1□□□□□ -0.95
FNDC3A-206ENST00000541916 TMEM8AQ9HCN3 771 aa9.1□□□□□ -0.95
FNDC3A-206ENST00000541916 DDIT4Q9NX09 232 aa9.1□□□□□ -0.95
FNDC3A-206ENST00000541916 RSPH14Q9UHP6 348 aa9.1□□□□□ -0.95
FNDC3A-206ENST00000541916 ZMYM2Q9UBW7 1377 aa9.1□□□□□ -0.95
FNDC3A-206ENST00000541916 KNDC1Q76NI1 1749 aa9.1□□□□□ -0.95
FNDC3A-206ENST00000541916 SPATA31C2B4DYI2 1134 aa9.1□□□□□ -0.95
FNDC3A-206ENST00000541916 OPLAHO14841 1288 aa9.1□□□□□ -0.95
FNDC3A-206ENST00000541916 PTPN11Q06124 597 aaPredicted RBP9.1□□□□□ -0.95
FNDC3A-206ENST00000541916 MFSD4BQ5TF39 518 aa9.1□□□□□ -0.95
FNDC3A-206ENST00000541916 TTC19Q6DKK2 380 aaPredicted RBP9.1□□□□□ -0.95
FNDC3A-206ENST00000541916 IFT20Q8IY31 132 aa9.1□□□□□ -0.95
FNDC3A-206ENST00000541916 RUNDC3BQ96NL0 473 aa9.1□□□□□ -0.95
FNDC3A-206ENST00000541916 GPR63Q9BZJ6 419 aa9.1□□□□□ -0.95
FNDC3A-206ENST00000541916 CYP26A1O43174 497 aa9.1□□□□□ -0.95
FNDC3A-206ENST00000541916 SNX2O60749 519 aa9.1□□□□□ -0.95
FNDC3A-206ENST00000541916 SYF2O95926 243 aaKnown RBP9.1□□□□□ -0.95
FNDC3A-206ENST00000541916 CSH1P0DML2 217 aa9.1□□□□□ -0.95
FNDC3A-206ENST00000541916 CSH2P0DML3 217 aa9.1□□□□□ -0.95
FNDC3A-206ENST00000541916 CAPN2P17655 700 aa9.1□□□□□ -0.95
FNDC3A-206ENST00000541916 HDCP19113 662 aa9.1□□□□□ -0.95
FNDC3A-206ENST00000541916 CDH6P55285 790 aa9.1□□□□□ -0.95
FNDC3A-206ENST00000541916 BYSLQ13895 437 aaKnown RBP9.1□□□□□ -0.95
FNDC3A-206ENST00000541916 MAP7Q14244 749 aa9.1□□□□□ -0.95
FNDC3A-206ENST00000541916 PLCL1Q15111 1095 aa9.1□□□□□ -0.95
FNDC3A-206ENST00000541916 RNF217Q8TC41 542 aa9.1□□□□□ -0.95
FNDC3A-206ENST00000541916 CENPKQ9BS16 269 aa9.1□□□□□ -0.95
FNDC3A-206ENST00000541916 ELOVL4Q9GZR5 314 aa9.1□□□□□ -0.95
FNDC3A-206ENST00000541916 NKX2-4Q9H2Z4 354 aa9.1□□□□□ -0.95
FNDC3A-206ENST00000541916 APODP05090 189 aa9.1□□□□□ -0.95
FNDC3A-206ENST00000541916 GARTP22102 1010 aa9.1□□□□□ -0.95
FNDC3A-206ENST00000541916 EHHADHQ08426 723 aa9.1□□□□□ -0.95
FNDC3A-206ENST00000541916 TCP11X2Q5H9J9 407 aa9.1□□□□□ -0.95
FNDC3A-206ENST00000541916 C10orf76Q5T2E6 689 aa9.1□□□□□ -0.95
FNDC3A-206ENST00000541916 DCLRE1AQ6PJP8 1040 aa9.1□□□□□ -0.95
FNDC3A-206ENST00000541916 CCDC60Q8IWA6 550 aaPredicted RBP9.1□□□□□ -0.95
FNDC3A-206ENST00000541916 PXYLP1Q8TE99 480 aa9.1□□□□□ -0.95
FNDC3A-206ENST00000541916 FAM105AQ9NUU6 356 aa9.1□□□□□ -0.95
FNDC3A-206ENST00000541916 MED24O75448 989 aa9.1□□□□□ -0.95
FNDC3A-206ENST00000541916 PRCPP42785 496 aa9.1□□□□□ -0.95
FNDC3A-206ENST00000541916 THOP1P52888 689 aa9.1□□□□□ -0.95
FNDC3A-206ENST00000541916 ORC1Q13415 861 aa9.1□□□□□ -0.95
FNDC3A-206ENST00000541916 ERAP2Q6P179 960 aa9.1□□□□□ -0.95
FNDC3A-206ENST00000541916 OTOP3Q7RTS5 596 aa9.1□□□□□ -0.95
FNDC3A-206ENST00000541916 RHOT2Q8IXI1 618 aa9.1□□□□□ -0.95
FNDC3A-206ENST00000541916 TSC1Q92574 1164 aa9.1□□□□□ -0.95
FNDC3A-206ENST00000541916 CYFIP2Q96F07 1278 aa9.1□□□□□ -0.95
FNDC3A-206ENST00000541916 POP1Q99575 1024 aaKnown RBP9.1□□□□□ -0.95
FNDC3A-206ENST00000541916 SLC30A1Q9Y6M5 507 aa9.1□□□□□ -0.95
FNDC3A-206ENST00000541916 MAPK13O15264 365 aa9.09□□□□□ -0.95
FNDC3A-206ENST00000541916 RHOBTB3O94955 611 aa9.09□□□□□ -0.95
FNDC3A-206ENST00000541916 ADH1CP00326 375 aa9.09□□□□□ -0.95
FNDC3A-206ENST00000541916 HPDP32754 393 aaPredicted RBP9.09□□□□□ -0.95
FNDC3A-206ENST00000541916 SLC12A1Q13621 1099 aa9.09□□□□□ -0.95
FNDC3A-206ENST00000541916 SZRD1Q7Z422 152 aa9.09□□□□□ -0.95
FNDC3A-206ENST00000541916 ANKS4BQ8N8V4 417 aa9.09□□□□□ -0.95
FNDC3A-206ENST00000541916 OR6P1Q8NGX9 317 aa9.09□□□□□ -0.95
FNDC3A-206ENST00000541916 CFAP36Q96G28 342 aa9.09□□□□□ -0.95
FNDC3A-206ENST00000541916 EGFL8Q99944 293 aa9.09□□□□□ -0.95
FNDC3A-206ENST00000541916 GMEB2Q9UKD1 530 aa9.09□□□□□ -0.95
FNDC3A-206ENST00000541916 COL1A2P08123 1366 aa9.09□□□□□ -0.95
FNDC3A-206ENST00000541916 IGF2BP3O00425 579 aaKnown RBP eCLIP9.09□□□□□ -0.95
FNDC3A-206ENST00000541916 PRPF4O43172 522 aaKnown RBP eCLIP9.09□□□□□ -0.95
FNDC3A-206ENST00000541916 BUB1BO60566 1050 aaPredicted RBP9.09□□□□□ -0.95
FNDC3A-206ENST00000541916 FBXO21O94952 628 aa9.09□□□□□ -0.95
FNDC3A-206ENST00000541916 CASP14P31944 242 aa9.09□□□□□ -0.95
FNDC3A-206ENST00000541916 OR1D2P34982 312 aa9.09□□□□□ -0.95
FNDC3A-206ENST00000541916 NXNQ6DKJ4 435 aa9.09□□□□□ -0.95
FNDC3A-206ENST00000541916 HDDC3Q8N4P3 179 aa9.09□□□□□ -0.95
FNDC3A-206ENST00000541916 CYP2W1Q8TAV3 490 aa9.09□□□□□ -0.95
FNDC3A-206ENST00000541916 SCG3Q8WXD2 468 aaKnown RBP9.09□□□□□ -0.95
FNDC3A-206ENST00000541916 SMARCD1Q96GM5 515 aa9.09□□□□□ -0.95
FNDC3A-206ENST00000541916 SLC9A7Q96T83 725 aa9.09□□□□□ -0.95
FNDC3A-206ENST00000541916 USP18Q9UMW8 372 aa9.09□□□□□ -0.95
FNDC3A-206ENST00000541916 APOL1O14791 398 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms