RNA–Protein interactions for RNA: ENST00000541735.5

DMD-228, Transcript of dystrophin, humanhuman

TSL 5 BASIC

Gene DMD, Length 7,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-228ENST00000541735 RASA4O43374 803 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 SERPING1P05155 500 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 PDGFRAP16234 1089 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 POU1F1P28069 291 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 CUL4AQ13619 759 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 OTOAQ7RTW8 1153 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 COLGALT2Q8IYK4 626 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 NAT16Q8N8M0 369 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 SEPT1Q8WYJ6 367 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 AKT1S1Q96B36 256 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 MCEEQ96PE7 176 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 GTPBP2Q9BX10 602 aaKnown RBP6.6□□□□□ -1.35
DMD-228ENST00000541735 TRIM4Q9C037 500 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 FHDC1Q9C0D6 1143 aaPredicted RBP6.6□□□□□ -1.35
DMD-228ENST00000541735 ARHGEF3Q9NR81 526 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 TRPM5Q9NZQ8 1165 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 LZTS1Q9Y250 596 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 GNG14A0A1W2PPG7 69 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 STX7O15400 261 aaKnown RBP6.6□□□□□ -1.35
DMD-228ENST00000541735 SEC31AO94979 1220 aaKnown RBP6.6□□□□□ -1.35
DMD-228ENST00000541735 FTLP02792 175 aaPredicted RBP6.6□□□□□ -1.35
DMD-228ENST00000541735 SERPINB3P29508 390 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 SEC13P55735 322 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 POLE2P56282 527 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 MDM2Q00987 491 aaPredicted RBP6.6□□□□□ -1.35
DMD-228ENST00000541735 PRKCEQ02156 737 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 XRCC4Q13426 336 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 MED21Q13503 144 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 PDXDC1Q6P996 788 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 ARNTL2Q8WYA1 636 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 HPS3Q969F9 1004 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 PAWRQ96IZ0 340 aaKnown RBP6.6□□□□□ -1.35
DMD-228ENST00000541735 RUNDC3BQ96NL0 473 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 DEFB118Q96PH6 123 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 ZMYND12Q9H0C1 365 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 OSBPL2Q9H1P3 480 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 ADARB2Q9NS39 739 aaKnown RBP6.6□□□□□ -1.35
DMD-228ENST00000541735 ERAP1Q9NZ08 941 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 PKD2L2Q9NZM6 624 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 JRKLQ9Y4A0 524 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 TIAM1Q13009 1591 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 PFKFB2O60825 505 aa6.59□□□□□ -1.35
DMD-228ENST00000541735 TCP1P17987 556 aaKnown RBP6.59□□□□□ -1.35
DMD-228ENST00000541735 CLCN3P51790 818 aa6.59□□□□□ -1.35
DMD-228ENST00000541735 MAPRE1Q15691 268 aaKnown RBP6.59□□□□□ -1.35
DMD-228ENST00000541735 CARTPTQ16568 116 aa6.59□□□□□ -1.35
DMD-228ENST00000541735 DNAJB3Q8WWF6 145 aa6.59□□□□□ -1.35
DMD-228ENST00000541735 AK8Q96MA6 479 aa6.59□□□□□ -1.35
DMD-228ENST00000541735 CNPPD1Q9BV87 410 aa6.59□□□□□ -1.35
DMD-228ENST00000541735 RNF26Q9BY78 433 aaPredicted RBP6.59□□□□□ -1.35
DMD-228ENST00000541735 RASSF4Q9H2L5 321 aa6.59□□□□□ -1.35
DMD-228ENST00000541735 TUFT1Q9NNX1 390 aa6.59□□□□□ -1.35
DMD-228ENST00000541735 LNPEPQ9UIQ6 1025 aa6.59□□□□□ -1.35
DMD-228ENST00000541735 FAM50BQ9Y247 325 aa6.59□□□□□ -1.35
DMD-228ENST00000541735 NEDD4P46934 1319 aa6.59□□□□□ -1.35
DMD-228ENST00000541735 MYMKA6NI61 221 aa6.59□□□□□ -1.35
DMD-228ENST00000541735 ANGPT2O15123 496 aa6.59□□□□□ -1.35
DMD-228ENST00000541735 LUC7L3O95232 432 aaKnown RBP6.59□□□□□ -1.35
DMD-228ENST00000541735 FAM200BP0CF97 657 aa6.59□□□□□ -1.35
DMD-228ENST00000541735 RBBP4Q09028 425 aa6.59□□□□□ -1.35
DMD-228ENST00000541735 CUL3Q13618 768 aa6.59□□□□□ -1.35
DMD-228ENST00000541735 UBXN2BQ14CS0 331 aa6.59□□□□□ -1.35
DMD-228ENST00000541735 EPC2Q52LR7 807 aa6.59□□□□□ -1.35
DMD-228ENST00000541735 KCNV1Q6PIU1 500 aa6.59□□□□□ -1.35
DMD-228ENST00000541735 PCSK9Q8NBP7 692 aaKnown RBP6.59□□□□□ -1.35
DMD-228ENST00000541735 OSMRQ99650 979 aa6.59□□□□□ -1.35
DMD-228ENST00000541735 CUEDC2Q9H467 287 aa6.59□□□□□ -1.35
DMD-228ENST00000541735 TASP1Q9H6P5 420 aa6.59□□□□□ -1.35
DMD-228ENST00000541735 WDCPQ9H6R7 721 aa6.59□□□□□ -1.35
DMD-228ENST00000541735 SETD4Q9NVD3 440 aa6.59□□□□□ -1.35
DMD-228ENST00000541735 MARCOQ9UEW3 520 aaPredicted RBP6.59□□□□□ -1.35
DMD-228ENST00000541735 CHORDC1Q9UHD1 332 aaPredicted RBP6.59□□□□□ -1.35
DMD-228ENST00000541735 ZNHIT2Q9UHR6 403 aa6.59□□□□□ -1.35
DMD-228ENST00000541735 GPATCH8Q9UKJ3 1502 aaKnown RBP6.59□□□□□ -1.35
DMD-228ENST00000541735 ATP10AO60312 1499 aa6.59□□□□□ -1.35
DMD-228ENST00000541735 PRPF3O43395 683 aaKnown RBP6.59□□□□□ -1.35
DMD-228ENST00000541735 MMP1P03956 469 aa6.59□□□□□ -1.35
DMD-228ENST00000541735 POLBP06746 335 aa6.59□□□□□ -1.35
DMD-228ENST00000541735 HOXB7P09629 217 aa6.59□□□□□ -1.35
DMD-228ENST00000541735 SYN1P17600 705 aa6.59□□□□□ -1.35
DMD-228ENST00000541735 RGS4P49798 205 aa6.59□□□□□ -1.35
DMD-228ENST00000541735 LRRC14Q15048 493 aa6.59□□□□□ -1.35
DMD-228ENST00000541735 KRT31Q15323 416 aa6.59□□□□□ -1.35
DMD-228ENST00000541735 POMZP3Q6PJE2 187 aa6.59□□□□□ -1.35
DMD-228ENST00000541735 TFAP2DQ7Z6R9 452 aa6.59□□□□□ -1.35
DMD-228ENST00000541735 SP8Q8IXZ3 490 aa6.59□□□□□ -1.35
DMD-228ENST00000541735 STAG2Q8N3U4 1231 aa6.59□□□□□ -1.35
DMD-228ENST00000541735 CCDC197Q8NCU1 140 aa6.59□□□□□ -1.35
DMD-228ENST00000541735 ATP6V1C2Q8NEY4 427 aa6.59□□□□□ -1.35
DMD-228ENST00000541735 TBC1D16Q8TBP0 767 aa6.59□□□□□ -1.35
DMD-228ENST00000541735 CNTNAP2Q9UHC6 1331 aa6.59□□□□□ -1.35
DMD-228ENST00000541735 GOLGA8KD6RF30 607 aa6.59□□□□□ -1.35
DMD-228ENST00000541735 PALMO75781 387 aa6.59□□□□□ -1.35
DMD-228ENST00000541735 SNUPNO95149 360 aaKnown RBP6.59□□□□□ -1.35
DMD-228ENST00000541735 RASGRP1O95267 797 aa6.59□□□□□ -1.35
DMD-228ENST00000541735 CFIP05156 583 aa6.59□□□□□ -1.35
DMD-228ENST00000541735 PCSK1P29120 753 aa6.59□□□□□ -1.35
DMD-228ENST00000541735 RAP1GAPP47736 663 aa6.59□□□□□ -1.35
DMD-228ENST00000541735 CTCFP49711 727 aaPredicted RBP6.59□□□□□ -1.35
DMD-228ENST00000541735 RHOAP61586 193 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms