RNA–Protein interactions for RNA: ENST00000541461.5

PHACTR3-209, Transcript of phosphatase and actin regulator 3, humanhuman

TSL 2 BASIC

Gene PHACTR3, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3-209ENST00000541461 RHOT1Q8IXI2 618 aa11.13□□□□□ -0.63
PHACTR3-209ENST00000541461 TMC2Q8TDI7 906 aa11.13□□□□□ -0.63
PHACTR3-209ENST00000541461 BSNDQ8WZ55 320 aa11.13□□□□□ -0.63
PHACTR3-209ENST00000541461 ZNF516Q92618 1163 aa11.13□□□□□ -0.63
PHACTR3-209ENST00000541461 SLC7A6OSQ96CW6 309 aaPredicted RBP11.13□□□□□ -0.63
PHACTR3-209ENST00000541461 NAF1Q96HR8 494 aaKnown RBP11.13□□□□□ -0.63
PHACTR3-209ENST00000541461 FAM81BQ96LP2 452 aa11.13□□□□□ -0.63
PHACTR3-209ENST00000541461 CFAP57Q96MR6 1250 aa11.13□□□□□ -0.63
PHACTR3-209ENST00000541461 RNPEPL1Q9HAU8 725 aa11.13□□□□□ -0.63
PHACTR3-209ENST00000541461 PICK1Q9NRD5 415 aa11.13□□□□□ -0.63
PHACTR3-209ENST00000541461 DNPEPQ9ULA0 475 aa11.13□□□□□ -0.63
PHACTR3-209ENST00000541461 SNCAIPQ9Y6H5 919 aa11.13□□□□□ -0.63
PHACTR3-209ENST00000541461 PRPF4O43172 522 aaKnown RBP eCLIP11.13□□□□□ -0.63
PHACTR3-209ENST00000541461 EDF1O60869 148 aaKnown RBP11.13□□□□□ -0.63
PHACTR3-209ENST00000541461 ABHD2P08910 425 aa11.13□□□□□ -0.63
PHACTR3-209ENST00000541461 MYBL1P10243 752 aa11.13□□□□□ -0.63
PHACTR3-209ENST00000541461 FGFR1P11362 822 aa11.13□□□□□ -0.63
PHACTR3-209ENST00000541461 TCF4P15884 667 aa11.13□□□□□ -0.63
PHACTR3-209ENST00000541461 PECAM1P16284 738 aaPredicted RBP11.13□□□□□ -0.63
PHACTR3-209ENST00000541461 CALB2P22676 271 aa11.13□□□□□ -0.63
PHACTR3-209ENST00000541461 EPHB2P29323 1055 aa11.13□□□□□ -0.63
PHACTR3-209ENST00000541461 GCKP35557 465 aa11.13□□□□□ -0.63
PHACTR3-209ENST00000541461 HSD17B4P51659 736 aa11.13□□□□□ -0.63
PHACTR3-209ENST00000541461 GCNT1Q02742 428 aa11.13□□□□□ -0.63
PHACTR3-209ENST00000541461 PTP4A2Q12974 167 aa11.13□□□□□ -0.63
PHACTR3-209ENST00000541461 BLMHQ13867 455 aa11.13□□□□□ -0.63
PHACTR3-209ENST00000541461 SPOPLQ6IQ16 392 aa11.13□□□□□ -0.63
PHACTR3-209ENST00000541461 MAP4K3Q8IVH8 894 aa11.13□□□□□ -0.63
PHACTR3-209ENST00000541461 KATNAL2Q8IYT4 538 aa11.13□□□□□ -0.63
PHACTR3-209ENST00000541461 AGGF1Q8N302 714 aaeCLIP11.13□□□□□ -0.63
PHACTR3-209ENST00000541461 RIBC1Q8N443 379 aaPredicted RBP11.13□□□□□ -0.63
PHACTR3-209ENST00000541461 ZNF784Q8NCA9 323 aaPredicted RBP11.13□□□□□ -0.63
PHACTR3-209ENST00000541461 FAM213AQ9BRX8 229 aa11.13□□□□□ -0.63
PHACTR3-209ENST00000541461 TBC1D10AQ9BXI6 508 aa11.13□□□□□ -0.63
PHACTR3-209ENST00000541461 MOV10L1Q9BXT6 1211 aaKnown RBP11.13□□□□□ -0.63
PHACTR3-209ENST00000541461 VPS37BQ9H9H4 285 aa11.13□□□□□ -0.63
PHACTR3-209ENST00000541461 CCPG1Q9ULG6 757 aa11.13□□□□□ -0.63
PHACTR3-209ENST00000541461 PCDHB2Q9Y5E7 798 aa11.13□□□□□ -0.63
PHACTR3-209ENST00000541461 H0Y3Z8 333 aa11.12□□□□□ -0.63
PHACTR3-209ENST00000541461 PSTPIP1O43586 416 aa11.12□□□□□ -0.63
PHACTR3-209ENST00000541461 ATP9AO75110 1047 aa11.12□□□□□ -0.63
PHACTR3-209ENST00000541461 BANF1O75531 89 aa11.12□□□□□ -0.63
PHACTR3-209ENST00000541461 ATP5HO75947 161 aa11.12□□□□□ -0.63
PHACTR3-209ENST00000541461 CYP1A1P04798 512 aaPredicted RBP11.12□□□□□ -0.63
PHACTR3-209ENST00000541461 CA4P22748 312 aa11.12□□□□□ -0.63
PHACTR3-209ENST00000541461 RAD23BP54727 409 aa11.12□□□□□ -0.63
PHACTR3-209ENST00000541461 MAMLD1Q13495 774 aa11.12□□□□□ -0.63
PHACTR3-209ENST00000541461 MTMR1Q13613 665 aa11.12□□□□□ -0.63
PHACTR3-209ENST00000541461 PDK4Q16654 411 aa11.12□□□□□ -0.63
PHACTR3-209ENST00000541461 TTC8Q8TAM2 541 aa11.12□□□□□ -0.63
PHACTR3-209ENST00000541461 LRRC8CQ8TDW0 803 aa11.12□□□□□ -0.63
PHACTR3-209ENST00000541461 C10orf82Q8WW14 230 aa11.12□□□□□ -0.63
PHACTR3-209ENST00000541461 FBXL18Q96ME1 805 aa11.12□□□□□ -0.63
PHACTR3-209ENST00000541461 SMC6Q96SB8 1091 aa11.12□□□□□ -0.63
PHACTR3-209ENST00000541461 KMT5AQ9NQR1 393 aa11.12□□□□□ -0.63
PHACTR3-209ENST00000541461 C1orf112Q9NSG2 853 aa11.12□□□□□ -0.63
PHACTR3-209ENST00000541461 CYP39A1Q9NYL5 469 aa11.12□□□□□ -0.63
PHACTR3-209ENST00000541461 SYNPO2Q9UMS6 1093 aa11.12□□□□□ -0.63
PHACTR3-209ENST00000541461 ZNF148Q9UQR1 794 aa11.12□□□□□ -0.63
PHACTR3-209ENST00000541461 CSADQ9Y600 493 aa11.12□□□□□ -0.63
PHACTR3-209ENST00000541461 DNALI1O14645 258 aaPredicted RBP11.12□□□□□ -0.63
PHACTR3-209ENST00000541461 LIASO43766 372 aa11.12□□□□□ -0.63
PHACTR3-209ENST00000541461 PIAS1O75925 651 aa11.12□□□□□ -0.63
PHACTR3-209ENST00000541461 LYPLA2O95372 231 aa11.12□□□□□ -0.63
PHACTR3-209ENST00000541461 TPBGLP0DKB5 382 aa11.12□□□□□ -0.63
PHACTR3-209ENST00000541461 ARSEP51690 589 aa11.12□□□□□ -0.63
PHACTR3-209ENST00000541461 HMGCS2P54868 508 aa11.12□□□□□ -0.63
PHACTR3-209ENST00000541461 NOP14P78316 857 aaKnown RBP11.12□□□□□ -0.63
PHACTR3-209ENST00000541461 GPS1Q13098 491 aa11.12□□□□□ -0.63
PHACTR3-209ENST00000541461 NR1H3Q13133 447 aa11.12□□□□□ -0.63
PHACTR3-209ENST00000541461 DMP1Q13316 513 aaPredicted RBP11.12□□□□□ -0.63
PHACTR3-209ENST00000541461 TAF1BQ53T94 588 aaPredicted RBP11.12□□□□□ -0.63
PHACTR3-209ENST00000541461 ZFYVE27Q5T4F4 411 aa11.12□□□□□ -0.63
PHACTR3-209ENST00000541461 CST9Q5W186 159 aa11.12□□□□□ -0.63
PHACTR3-209ENST00000541461 CDCA2Q69YH5 1023 aaPredicted RBP11.12□□□□□ -0.63
PHACTR3-209ENST00000541461 ANKRD13AQ8IZ07 590 aa11.12□□□□□ -0.63
PHACTR3-209ENST00000541461 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.12□□□□□ -0.63
PHACTR3-209ENST00000541461 STK32AQ8WU08 396 aa11.12□□□□□ -0.63
PHACTR3-209ENST00000541461 TRIM11Q96F44 468 aa11.12□□□□□ -0.63
PHACTR3-209ENST00000541461 OTUD5Q96G74 571 aa11.12□□□□□ -0.63
PHACTR3-209ENST00000541461 NUDCD1Q96RS6 583 aa11.12□□□□□ -0.63
PHACTR3-209ENST00000541461 MAK16Q9BXY0 300 aaKnown RBP11.12□□□□□ -0.63
PHACTR3-209ENST00000541461 UBN1Q9NPG3 1134 aa11.12□□□□□ -0.63
PHACTR3-209ENST00000541461 GINM1Q9NU53 330 aa11.12□□□□□ -0.63
PHACTR3-209ENST00000541461 CORO1CQ9ULV4 474 aaPredicted RBP11.12□□□□□ -0.63
PHACTR3-209ENST00000541461 UBIAD1Q9Y5Z9 338 aa11.12□□□□□ -0.63
PHACTR3-209ENST00000541461 NUMBLQ9Y6R0 609 aa11.12□□□□□ -0.63
PHACTR3-209ENST00000541461 CEP350Q5VT06 3117 aa11.12□□□□□ -0.63
PHACTR3-209ENST00000541461 PHIPQ8WWQ0 1821 aa11.11□□□□□ -0.63
PHACTR3-209ENST00000541461 WDR91A4D1P6 747 aa11.11□□□□□ -0.63
PHACTR3-209ENST00000541461 TLR3O15455 904 aaKnown RBP11.11□□□□□ -0.63
PHACTR3-209ENST00000541461 MAFGO15525 162 aa11.11□□□□□ -0.63
PHACTR3-209ENST00000541461 ENTPD5O75356 428 aa11.11□□□□□ -0.63
PHACTR3-209ENST00000541461 DCTN3O75935 186 aa11.11□□□□□ -0.63
PHACTR3-209ENST00000541461 CCNE2O96020 404 aa11.11□□□□□ -0.63
PHACTR3-209ENST00000541461 ATF7P17544 494 aaPredicted RBP11.11□□□□□ -0.63
PHACTR3-209ENST00000541461 EIF2AK2P19525 551 aaKnown RBP11.11□□□□□ -0.63
PHACTR3-209ENST00000541461 ALDH3A1P30838 453 aa11.11□□□□□ -0.63
PHACTR3-209ENST00000541461 GTF2H1P32780 548 aa11.11□□□□□ -0.63
PHACTR3-209ENST00000541461 PEX19P40855 299 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms